RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 SEPT4O43236 478 aa22.13■■□□□ 1.13
HDAC6-202ENST00000376610 COBLO75128 1261 aa22.13■■□□□ 1.13
HDAC6-202ENST00000376610 ATN1P54259 1190 aaPredicted RBP22.13■■□□□ 1.13
HDAC6-202ENST00000376610 LRIT3Q3SXY7 679 aa22.13■■□□□ 1.13
HDAC6-202ENST00000376610 GIMAP6Q6P9H5 292 aa22.13■■□□□ 1.13
HDAC6-202ENST00000376610 STRBPQ96SI9 672 aaKnown RBP22.13■■□□□ 1.13
HDAC6-202ENST00000376610 LBHD1Q9BQE6 289 aaPredicted RBP22.13■■□□□ 1.13
HDAC6-202ENST00000376610 ZNFX1Q9P2E3 1918 aaKnown RBP22.13■■□□□ 1.13
HDAC6-202ENST00000376610 COL11A1P12107 1806 aaPredicted RBP22.13■■□□□ 1.13
HDAC6-202ENST00000376610 IGHA2P01877 340 aa22.12■■□□□ 1.13
HDAC6-202ENST00000376610 MYCNP04198 464 aaPredicted RBP22.12■■□□□ 1.13
HDAC6-202ENST00000376610 ZFYP08048 801 aaPredicted RBP22.12■■□□□ 1.13
HDAC6-202ENST00000376610 COPB2P35606 906 aa22.12■■□□□ 1.13
HDAC6-202ENST00000376610 KCTD2Q14681 263 aa22.12■■□□□ 1.13
HDAC6-202ENST00000376610 TMEM132BQ14DG7 1078 aa22.12■■□□□ 1.13
HDAC6-202ENST00000376610 SBK1Q52WX2 424 aa22.12■■□□□ 1.13
HDAC6-202ENST00000376610 GJC2Q5T442 439 aaPredicted RBP22.12■■□□□ 1.13
HDAC6-202ENST00000376610 APPBP2Q92624 585 aa22.12■■□□□ 1.13
HDAC6-202ENST00000376610 MMP19Q99542 508 aa22.12■■□□□ 1.13
HDAC6-202ENST00000376610 DCTPP1Q9H773 170 aa22.12■■□□□ 1.13
HDAC6-202ENST00000376610 ZNF287Q9HBT7 754 aa22.12■■□□□ 1.13
HDAC6-202ENST00000376610 MINDY4BA8MYZ0 360 aa22.11■■□□□ 1.13
HDAC6-202ENST00000376610 RNF113AO15541 343 aaKnown RBP22.11■■□□□ 1.13
HDAC6-202ENST00000376610 GNAT2P19087 354 aa22.11■■□□□ 1.13
HDAC6-202ENST00000376610 STAT3P40763 770 aa22.11■■□□□ 1.13
HDAC6-202ENST00000376610 MDM2Q00987 491 aaPredicted RBP22.11■■□□□ 1.13
HDAC6-202ENST00000376610 FAM83BQ5T0W9 1011 aa22.11■■□□□ 1.13
HDAC6-202ENST00000376610 RIOX2Q8IUF8 465 aa22.11■■□□□ 1.13
HDAC6-202ENST00000376610 MAML3Q96JK9 1138 aa22.11■■□□□ 1.13
HDAC6-202ENST00000376610 FBXO28Q9NVF7 368 aa22.11■■□□□ 1.13
HDAC6-202ENST00000376610 PPP1R9AQ9ULJ8 1098 aa22.11■■□□□ 1.13
HDAC6-202ENST00000376610 VWA5AO00534 786 aa22.1■■□□□ 1.13
HDAC6-202ENST00000376610 TDO2P48775 406 aa22.1■■□□□ 1.13
HDAC6-202ENST00000376610 STK11IPQ8N1F8 1099 aa22.1■■□□□ 1.13
HDAC6-202ENST00000376610 ADAMTS5Q9UNA0 930 aa22.1■■□□□ 1.13
HDAC6-202ENST00000376610 GSG1L2A8MUP6 293 aa22.09■■□□□ 1.13
HDAC6-202ENST00000376610 APPP05067 770 aa22.09■■□□□ 1.13
HDAC6-202ENST00000376610 RTP1P59025 263 aa22.09■■□□□ 1.13
HDAC6-202ENST00000376610 ANO1Q5XXA6 986 aa22.09■■□□□ 1.13
HDAC6-202ENST00000376610 OSBP2Q969R2 916 aa22.09■■□□□ 1.13
HDAC6-202ENST00000376610 NRBP1Q9UHY1 535 aa22.09■■□□□ 1.13
HDAC6-202ENST00000376610 ATP11BQ9Y2G3 1177 aa22.09■■□□□ 1.13
HDAC6-202ENST00000376610 ERC2O15083 957 aa22.08■■□□□ 1.13
HDAC6-202ENST00000376610 GPAA1O43292 621 aa22.08■■□□□ 1.13
HDAC6-202ENST00000376610 RASA1P20936 1047 aa22.08■■□□□ 1.13
HDAC6-202ENST00000376610 TSHZ3Q63HK5 1081 aa22.08■■□□□ 1.13
HDAC6-202ENST00000376610 DEFB123Q8N688 67 aa22.08■■□□□ 1.13
HDAC6-202ENST00000376610 SLF1Q9BQI6 1058 aa22.08■■□□□ 1.13
HDAC6-202ENST00000376610 NYAP2Q9P242 653 aa22.08■■□□□ 1.13
HDAC6-202ENST00000376610 CTDP1Q9Y5B0 961 aaPredicted RBP22.08■■□□□ 1.13
HDAC6-202ENST00000376610 ROBO3Q96MS0 1386 aa22.08■■□□□ 1.12
HDAC6-202ENST00000376610 GREB1LQ9C091 1923 aaPredicted RBP22.08■■□□□ 1.12
HDAC6-202ENST00000376610 PLXNA1Q9UIW2 1896 aa22.07■■□□□ 1.12
HDAC6-202ENST00000376610 PGK2P07205 417 aa22.07■■□□□ 1.12
HDAC6-202ENST00000376610 PRAMEF19Q5SWL8 479 aa22.07■■□□□ 1.12
HDAC6-202ENST00000376610 ZNF444Q8N0Y2 327 aaPredicted RBP22.07■■□□□ 1.12
HDAC6-202ENST00000376610 NACAP1Q9BZK3 213 aa22.07■■□□□ 1.12
HDAC6-202ENST00000376610 DIS3Q9Y2L1 958 aaKnown RBP22.07■■□□□ 1.12
HDAC6-202ENST00000376610 RARBP10826 455 aa22.06■■□□□ 1.12
HDAC6-202ENST00000376610 SLC39A5Q6ZMH5 540 aa22.06■■□□□ 1.12
HDAC6-202ENST00000376610 TINF2Q9BSI4 451 aa22.06■■□□□ 1.12
HDAC6-202ENST00000376610 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.06■■□□□ 1.12
HDAC6-202ENST00000376610 TEX13BQ9BXU2 312 aa22.06■■□□□ 1.12
HDAC6-202ENST00000376610 ZNF214Q9UL59 606 aaPredicted RBP22.06■■□□□ 1.12
HDAC6-202ENST00000376610 MYH4Q9Y623 1939 aa22.06■■□□□ 1.12
HDAC6-202ENST00000376610 TTC41PQ6P2S7 1318 aa22.06■■□□□ 1.12
HDAC6-202ENST00000376610 DNAH12Q6ZR08 3092 aa22.05■■□□□ 1.12
HDAC6-202ENST00000376610 F5H6K3 240 aa22.05■■□□□ 1.12
HDAC6-202ENST00000376610 KLRC3Q07444 240 aa22.05■■□□□ 1.12
HDAC6-202ENST00000376610 LRRC41Q15345 812 aa22.05■■□□□ 1.12
HDAC6-202ENST00000376610 SLC17A8Q8NDX2 589 aa22.05■■□□□ 1.12
HDAC6-202ENST00000376610 NUP88Q99567 741 aaPredicted RBP22.05■■□□□ 1.12
HDAC6-202ENST00000376610 XPNPEP3Q9NQH7 507 aa22.05■■□□□ 1.12
HDAC6-202ENST00000376610 CLIP2Q9UDT6 1046 aa22.05■■□□□ 1.12
HDAC6-202ENST00000376610 CNPY2Q9Y2B0 182 aa22.05■■□□□ 1.12
HDAC6-202ENST00000376610 SMCHD1A6NHR9 2005 aa22.04■■□□□ 1.12
HDAC6-202ENST00000376610 ZBED4O75132 1171 aa22.04■■□□□ 1.12
HDAC6-202ENST00000376610 NDUFB10O96000 172 aa22.04■■□□□ 1.12
HDAC6-202ENST00000376610 SLC3A2P08195 630 aaKnown RBP22.04■■□□□ 1.12
HDAC6-202ENST00000376610 ADCYAP1R1P41586 468 aa22.04■■□□□ 1.12
HDAC6-202ENST00000376610 ZNF792Q3KQV3 632 aa22.04■■□□□ 1.12
HDAC6-202ENST00000376610 FAM47AQ5JRC9 791 aa22.04■■□□□ 1.12
HDAC6-202ENST00000376610 SNRNP48Q6IEG0 339 aaKnown RBP22.04■■□□□ 1.12
HDAC6-202ENST00000376610 RNF180Q86T96 592 aa22.04■■□□□ 1.12
HDAC6-202ENST00000376610 PRPF38AQ8NAV1 312 aaKnown RBP22.04■■□□□ 1.12
HDAC6-202ENST00000376610 REPS2Q8NFH8 660 aa22.04■■□□□ 1.12
HDAC6-202ENST00000376610 EPB41L4AQ9HCS5 686 aaPredicted RBP22.04■■□□□ 1.12
HDAC6-202ENST00000376610 PRDM5Q9NQX1 630 aaPredicted RBP22.04■■□□□ 1.12
HDAC6-202ENST00000376610 PATL2C9JE40 543 aaKnown RBP22.03■■□□□ 1.12
HDAC6-202ENST00000376610 M0R2C6 588 aa22.03■■□□□ 1.12
HDAC6-202ENST00000376610 PDE4BQ07343 736 aa22.03■■□□□ 1.12
HDAC6-202ENST00000376610 IFNL3Q8IZI9 196 aa22.03■■□□□ 1.12
HDAC6-202ENST00000376610 DDX11Q96FC9 970 aa22.03■■□□□ 1.12
HDAC6-202ENST00000376610 FSD1Q9BTV5 496 aa22.03■■□□□ 1.12
HDAC6-202ENST00000376610 ZBTB47Q9UFB7 747 aaPredicted RBP22.03■■□□□ 1.12
HDAC6-202ENST00000376610 PRDM1O75626 825 aa22.02■■□□□ 1.12
HDAC6-202ENST00000376610 AKR1A1P14550 325 aa22.02■■□□□ 1.12
HDAC6-202ENST00000376610 SLC4A3P48751 1232 aa22.02■■□□□ 1.12
HDAC6-202ENST00000376610 Q7L0L9 218 aa22.02■■□□□ 1.12
HDAC6-202ENST00000376610 MSL3Q8N5Y2 521 aaKnown RBP22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms