RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 RANBP6O60518 1105 aaKnown RBP16.92■□□□□ 0.3
CLCN6-203ENST00000376490 TTLL1O95922 423 aa16.92■□□□□ 0.3
CLCN6-203ENST00000376490 NDUFB10O96000 172 aa16.92■□□□□ 0.3
CLCN6-203ENST00000376490 FGRP09769 529 aa16.92■□□□□ 0.3
CLCN6-203ENST00000376490 MFAP1P55081 439 aaKnown RBP16.92■□□□□ 0.3
CLCN6-203ENST00000376490 HAND2P61296 217 aa16.92■□□□□ 0.3
CLCN6-203ENST00000376490 PLS1Q14651 629 aa16.92■□□□□ 0.3
CLCN6-203ENST00000376490 SPATC1LQ9H0A9 340 aa16.92■□□□□ 0.3
CLCN6-203ENST00000376490 IL17RBQ9NRM6 502 aa16.92■□□□□ 0.3
CLCN6-203ENST00000376490 ADAMTS5Q9UNA0 930 aa16.92■□□□□ 0.3
CLCN6-203ENST00000376490 PLIN4Q96Q06 1357 aa16.91■□□□□ 0.3
CLCN6-203ENST00000376490 PLXNA1Q9UIW2 1896 aa16.91■□□□□ 0.3
CLCN6-203ENST00000376490 ORC4O43929 436 aa16.91■□□□□ 0.3
CLCN6-203ENST00000376490 NMT2O60551 498 aa16.91■□□□□ 0.3
CLCN6-203ENST00000376490 GJB1P08034 283 aa16.91■□□□□ 0.3
CLCN6-203ENST00000376490 XRCC5P13010 732 aaKnown RBP16.91■□□□□ 0.3
CLCN6-203ENST00000376490 PTPREP23469 700 aa16.91■□□□□ 0.3
CLCN6-203ENST00000376490 LRRC47Q8N1G4 583 aaKnown RBP16.91■□□□□ 0.3
CLCN6-203ENST00000376490 MB21D1Q8N884 522 aa16.91■□□□□ 0.3
CLCN6-203ENST00000376490 SOCS4Q8WXH5 440 aa16.91■□□□□ 0.3
CLCN6-203ENST00000376490 TRIB2Q92519 343 aa16.91■□□□□ 0.3
CLCN6-203ENST00000376490 TOMM22Q9NS69 142 aa16.91■□□□□ 0.3
CLCN6-203ENST00000376490 SLC15A5A6NIM6 579 aa16.9■□□□□ 0.3
CLCN6-203ENST00000376490 VWA5AO00534 786 aa16.9■□□□□ 0.3
CLCN6-203ENST00000376490 HMGCRP04035 888 aa16.9■□□□□ 0.3
CLCN6-203ENST00000376490 ERCC3P19447 782 aa16.9■□□□□ 0.3
CLCN6-203ENST00000376490 RGS2P41220 211 aa16.9■□□□□ 0.3
CLCN6-203ENST00000376490 MAP2K5Q13163 448 aa16.9■□□□□ 0.3
CLCN6-203ENST00000376490 TMEM132BQ14DG7 1078 aa16.9■□□□□ 0.3
CLCN6-203ENST00000376490 CCL14Q16627 93 aa16.9■□□□□ 0.3
CLCN6-203ENST00000376490 RRP12Q5JTH9 1297 aaKnown RBP16.9■□□□□ 0.3
CLCN6-203ENST00000376490 CHMP4CQ96CF2 233 aa16.9■□□□□ 0.3
CLCN6-203ENST00000376490 NBPF3Q9H094 633 aa16.9■□□□□ 0.3
CLCN6-203ENST00000376490 PPP1R9AQ9ULJ8 1098 aa16.9■□□□□ 0.3
CLCN6-203ENST00000376490 ZMYM6O95789 1325 aa16.9■□□□□ 0.3
CLCN6-203ENST00000376490 SMCHD1A6NHR9 2005 aa16.89■□□□□ 0.29
CLCN6-203ENST00000376490 GJA8P48165 433 aa16.89■□□□□ 0.29
CLCN6-203ENST00000376490 SLFN13Q68D06 897 aa16.89■□□□□ 0.29
CLCN6-203ENST00000376490 GMCL1P1Q8NEA9 526 aa16.89■□□□□ 0.29
CLCN6-203ENST00000376490 NKX2-3Q8TAU0 364 aa16.89■□□□□ 0.29
CLCN6-203ENST00000376490 SHISA4Q96DD7 197 aa16.89■□□□□ 0.29
CLCN6-203ENST00000376490 IL25Q9H293 177 aa16.89■□□□□ 0.29
CLCN6-203ENST00000376490 IVNS1ABPQ9Y6Y0 642 aa16.89■□□□□ 0.29
CLCN6-203ENST00000376490 SGPL1O95470 568 aa16.88■□□□□ 0.29
CLCN6-203ENST00000376490 AKNAD1Q5T1N1 836 aa16.88■□□□□ 0.29
CLCN6-203ENST00000376490 MFSD6Q6ZSS7 791 aa16.88■□□□□ 0.29
CLCN6-203ENST00000376490 NCAPG2Q86XI2 1143 aa16.88■□□□□ 0.29
CLCN6-203ENST00000376490 PRPF38AQ8NAV1 312 aaKnown RBP16.88■□□□□ 0.29
CLCN6-203ENST00000376490 SHCBP1Q8NEM2 672 aa16.88■□□□□ 0.29
CLCN6-203ENST00000376490 U2AF1L4Q8WU68 220 aaKnown RBP16.88■□□□□ 0.29
CLCN6-203ENST00000376490 DEFB118Q96PH6 123 aa16.88■□□□□ 0.29
CLCN6-203ENST00000376490 SLF1Q9BQI6 1058 aa16.88■□□□□ 0.29
CLCN6-203ENST00000376490 SYNPO2Q9UMS6 1093 aa16.88■□□□□ 0.29
CLCN6-203ENST00000376490 STX8Q9UNK0 236 aa16.88■□□□□ 0.29
CLCN6-203ENST00000376490 ZNF213O14771 459 aa16.87■□□□□ 0.29
CLCN6-203ENST00000376490 STRNO43815 780 aa16.87■□□□□ 0.29
CLCN6-203ENST00000376490 ZKSCAN1P17029 563 aaPredicted RBP16.87■□□□□ 0.29
CLCN6-203ENST00000376490 STAT3P40763 770 aa16.87■□□□□ 0.29
CLCN6-203ENST00000376490 GRB14Q14449 540 aa16.87■□□□□ 0.29
CLCN6-203ENST00000376490 TBC1D10CQ8IV04 446 aa16.87■□□□□ 0.29
CLCN6-203ENST00000376490 TRMT44Q8IYL2 757 aaKnown RBP16.87■□□□□ 0.29
CLCN6-203ENST00000376490 REPS2Q8NFH8 660 aa16.87■□□□□ 0.29
CLCN6-203ENST00000376490 NPLOC4Q8TAT6 608 aa16.87■□□□□ 0.29
CLCN6-203ENST00000376490 APBA2Q99767 749 aa16.87■□□□□ 0.29
CLCN6-203ENST00000376490 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.87■□□□□ 0.29
CLCN6-203ENST00000376490 MROH8Q9H579 483 aa16.87■□□□□ 0.29
CLCN6-203ENST00000376490 HMX1Q9NP08 348 aaPredicted RBP16.87■□□□□ 0.29
CLCN6-203ENST00000376490 PAK6Q9NQU5 681 aaPredicted RBP16.87■□□□□ 0.29
CLCN6-203ENST00000376490 FLRT1Q9NZU1 646 aa16.87■□□□□ 0.29
CLCN6-203ENST00000376490 RPTORQ8N122 1335 aa16.87■□□□□ 0.29
CLCN6-203ENST00000376490 ZNF236Q9UL36 1845 aa16.86■□□□□ 0.29
CLCN6-203ENST00000376490 TFRCP02786 760 aaKnown RBP16.86■□□□□ 0.29
CLCN6-203ENST00000376490 BMP3P12645 472 aa16.86■□□□□ 0.29
CLCN6-203ENST00000376490 MCCP23508 829 aa16.86■□□□□ 0.29
CLCN6-203ENST00000376490 CHMLP26374 656 aa16.86■□□□□ 0.29
CLCN6-203ENST00000376490 CACNB2Q08289 660 aaPredicted RBP16.86■□□□□ 0.29
CLCN6-203ENST00000376490 PPP4R3BQ5MIZ7 849 aa16.86■□□□□ 0.29
CLCN6-203ENST00000376490 DPP9Q86TI2 863 aa16.86■□□□□ 0.29
CLCN6-203ENST00000376490 STAG1Q8WVM7 1258 aa16.86■□□□□ 0.29
CLCN6-203ENST00000376490 KIFC2Q96AC6 838 aa16.86■□□□□ 0.29
CLCN6-203ENST00000376490 DSCC1Q9BVC3 393 aa16.86■□□□□ 0.29
CLCN6-203ENST00000376490 FEM1BQ9UK73 627 aa16.86■□□□□ 0.29
CLCN6-203ENST00000376490 ZNF214Q9UL59 606 aaPredicted RBP16.86■□□□□ 0.29
CLCN6-203ENST00000376490 BRCA2P51587 3418 aa16.85■□□□□ 0.29
CLCN6-203ENST00000376490 TMEM232C9JQI7 657 aa16.85■□□□□ 0.29
CLCN6-203ENST00000376490 COBLO75128 1261 aa16.85■□□□□ 0.29
CLCN6-203ENST00000376490 SLC25A27O95847 323 aa16.85■□□□□ 0.29
CLCN6-203ENST00000376490 HOXC6P09630 235 aa16.85■□□□□ 0.29
CLCN6-203ENST00000376490 PRKAR2AP13861 404 aaKnown RBP16.85■□□□□ 0.29
CLCN6-203ENST00000376490 ADORA2AP29274 412 aa16.85■□□□□ 0.29
CLCN6-203ENST00000376490 NOVP48745 357 aa16.85■□□□□ 0.29
CLCN6-203ENST00000376490 MAP3K21Q5TCX8 1036 aa16.85■□□□□ 0.29
CLCN6-203ENST00000376490 SKAP1Q86WV1 359 aa16.85■□□□□ 0.29
CLCN6-203ENST00000376490 RIOX2Q8IUF8 465 aa16.85■□□□□ 0.29
CLCN6-203ENST00000376490 TCP11L1Q9NUJ3 509 aa16.85■□□□□ 0.29
CLCN6-203ENST00000376490 ISY1Q9ULR0 285 aaKnown RBP16.85■□□□□ 0.29
CLCN6-203ENST00000376490 MTMR7Q9Y216 660 aa16.85■□□□□ 0.29
CLCN6-203ENST00000376490 FRMPD3Q5JV73 1810 aa16.84■□□□□ 0.29
CLCN6-203ENST00000376490 ZBED4O75132 1171 aa16.84■□□□□ 0.29
CLCN6-203ENST00000376490 FCER1AP12319 257 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms