RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 AIFM3Q96NN9 605 aa12.15□□□□□ -0.46
PDPN-203ENST00000376061 RNF26Q9BY78 433 aaPredicted RBP12.15□□□□□ -0.46
PDPN-203ENST00000376061 ZNF112Q9UJU3 913 aa12.15□□□□□ -0.46
PDPN-203ENST00000376061 SYNPO2Q9UMS6 1093 aa12.15□□□□□ -0.46
PDPN-203ENST00000376061 A0A1W2PRG0 241 aa12.14□□□□□ -0.47
PDPN-203ENST00000376061 CTNND1O60716 968 aaKnown RBP12.14□□□□□ -0.47
PDPN-203ENST00000376061 GOLGA8HP0CJ92 632 aa12.14□□□□□ -0.47
PDPN-203ENST00000376061 ZSCAN22P10073 491 aaPredicted RBP12.14□□□□□ -0.47
PDPN-203ENST00000376061 GNAQP50148 359 aa12.14□□□□□ -0.47
PDPN-203ENST00000376061 ZNF543Q08ER8 600 aa12.14□□□□□ -0.47
PDPN-203ENST00000376061 SLC35G1Q2M3R5 365 aa12.14□□□□□ -0.47
PDPN-203ENST00000376061 ASPRV1Q53RT3 343 aa12.14□□□□□ -0.47
PDPN-203ENST00000376061 FOXD4L5Q5VV16 416 aaPredicted RBP12.14□□□□□ -0.47
PDPN-203ENST00000376061 USP17L2Q6R6M4 530 aa12.14□□□□□ -0.47
PDPN-203ENST00000376061 CCDC82Q8N4S0 544 aa12.14□□□□□ -0.47
PDPN-203ENST00000376061 GMCL1P1Q8NEA9 526 aa12.14□□□□□ -0.47
PDPN-203ENST00000376061 FOXD4L4Q8WXT5 416 aaPredicted RBP12.14□□□□□ -0.47
PDPN-203ENST00000376061 CDCA5Q96FF9 252 aa12.14□□□□□ -0.47
PDPN-203ENST00000376061 PHF12Q96QT6 1004 aa12.14□□□□□ -0.47
PDPN-203ENST00000376061 WRNIP1Q96S55 665 aa12.14□□□□□ -0.47
PDPN-203ENST00000376061 ARHGEF10LQ9HCE6 1279 aa12.14□□□□□ -0.47
PDPN-203ENST00000376061 GINM1Q9NU53 330 aa12.14□□□□□ -0.47
PDPN-203ENST00000376061 FZD1Q9UP38 647 aa12.14□□□□□ -0.47
PDPN-203ENST00000376061 PTPRFP10586 1907 aa12.14□□□□□ -0.47
PDPN-203ENST00000376061 FRMPD2Q68DX3 1309 aaPredicted RBP12.14□□□□□ -0.47
PDPN-203ENST00000376061 DEXIO95424 95 aa12.13□□□□□ -0.47
PDPN-203ENST00000376061 NDUFB10O96000 172 aa12.13□□□□□ -0.47
PDPN-203ENST00000376061 POTEJP0CG39 1038 aa12.13□□□□□ -0.47
PDPN-203ENST00000376061 PDIA4P13667 645 aaKnown RBP12.13□□□□□ -0.47
PDPN-203ENST00000376061 ECE1P42892 770 aa12.13□□□□□ -0.47
PDPN-203ENST00000376061 CCDC84Q86UT8 332 aaPredicted RBP12.13□□□□□ -0.47
PDPN-203ENST00000376061 USP48Q86UV5 1035 aa12.13□□□□□ -0.47
PDPN-203ENST00000376061 SCYL3Q8IZE3 742 aa12.13□□□□□ -0.47
PDPN-203ENST00000376061 ACER1Q8TDN7 264 aa12.13□□□□□ -0.47
PDPN-203ENST00000376061 DCAF4Q8WV16 495 aa12.13□□□□□ -0.47
PDPN-203ENST00000376061 KLRG1Q96E93 195 aa12.13□□□□□ -0.47
PDPN-203ENST00000376061 LZTS2Q9BRK4 669 aa12.13□□□□□ -0.47
PDPN-203ENST00000376061 ALG1Q9BT22 464 aa12.13□□□□□ -0.47
PDPN-203ENST00000376061 SPZ1Q9BXG8 430 aa12.13□□□□□ -0.47
PDPN-203ENST00000376061 GLIS2Q9BZE0 524 aaPredicted RBP12.13□□□□□ -0.47
PDPN-203ENST00000376061 PARP14Q460N5 1801 aa12.13□□□□□ -0.47
PDPN-203ENST00000376061 TCHHQ07283 1943 aa12.12□□□□□ -0.47
PDPN-203ENST00000376061 hCG_1642624A0A1W2PR95 340 aa12.12□□□□□ -0.47
PDPN-203ENST00000376061 KLRF2D3W0D1 207 aa12.12□□□□□ -0.47
PDPN-203ENST00000376061 H3BQV1 296 aa12.12□□□□□ -0.47
PDPN-203ENST00000376061 PRPF3O43395 683 aaKnown RBP12.12□□□□□ -0.47
PDPN-203ENST00000376061 CYTH3O43739 400 aa12.12□□□□□ -0.47
PDPN-203ENST00000376061 F13A1P00488 732 aa12.12□□□□□ -0.47
PDPN-203ENST00000376061 GUCY1B3Q02153 619 aa12.12□□□□□ -0.47
PDPN-203ENST00000376061 PKN1Q16512 942 aa12.12□□□□□ -0.47
PDPN-203ENST00000376061 CCDC96Q2M329 555 aa12.12□□□□□ -0.47
PDPN-203ENST00000376061 NOL9Q5SY16 702 aaKnown RBP12.12□□□□□ -0.47
PDPN-203ENST00000376061 IFFO2Q5TF58 517 aa12.12□□□□□ -0.47
PDPN-203ENST00000376061 SLFN13Q68D06 897 aa12.12□□□□□ -0.47
PDPN-203ENST00000376061 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.12□□□□□ -0.47
PDPN-203ENST00000376061 WASF1Q92558 559 aa12.12□□□□□ -0.47
PDPN-203ENST00000376061 GMCL1Q96IK5 515 aa12.12□□□□□ -0.47
PDPN-203ENST00000376061 C8orf76Q96K31 380 aa12.12□□□□□ -0.47
PDPN-203ENST00000376061 CPVLQ9H3G5 476 aa12.12□□□□□ -0.47
PDPN-203ENST00000376061 SH2D4AQ9H788 454 aa12.12□□□□□ -0.47
PDPN-203ENST00000376061 GJB4Q9NTQ9 266 aa12.12□□□□□ -0.47
PDPN-203ENST00000376061 TMX2Q9Y320 296 aa12.12□□□□□ -0.47
PDPN-203ENST00000376061 F5H6K3 240 aa12.11□□□□□ -0.47
PDPN-203ENST00000376061 VEGFAP15692 232 aaPredicted RBP12.11□□□□□ -0.47
PDPN-203ENST00000376061 AKAP17AQ02040 695 aaKnown RBP12.11□□□□□ -0.47
PDPN-203ENST00000376061 KLRC3Q07444 240 aa12.11□□□□□ -0.47
PDPN-203ENST00000376061 KIAA1755Q5JYT7 1200 aa12.11□□□□□ -0.47
PDPN-203ENST00000376061 GPATCH4Q5T3I0 446 aaKnown RBP12.11□□□□□ -0.47
PDPN-203ENST00000376061 OTUD7BQ6GQQ9 843 aa12.11□□□□□ -0.47
PDPN-203ENST00000376061 KCTD1Q719H9 257 aa12.11□□□□□ -0.47
PDPN-203ENST00000376061 FERMT3Q86UX7 667 aa12.11□□□□□ -0.47
PDPN-203ENST00000376061 RGS22Q8NE09 1264 aa12.11□□□□□ -0.47
PDPN-203ENST00000376061 FBXO18Q8NFZ0 1043 aa12.11□□□□□ -0.47
PDPN-203ENST00000376061 ZKSCAN4Q969J2 545 aaPredicted RBP12.11□□□□□ -0.47
PDPN-203ENST00000376061 RRAGCQ9HB90 399 aa12.11□□□□□ -0.47
PDPN-203ENST00000376061 GOPCQ9HD26 462 aa12.11□□□□□ -0.47
PDPN-203ENST00000376061 GPCPD1Q9NPB8 672 aa12.11□□□□□ -0.47
PDPN-203ENST00000376061 RBM27Q9P2N5 1060 aaKnown RBP12.11□□□□□ -0.47
PDPN-203ENST00000376061 V9GY48 417 aaPredicted RBP12.11□□□□□ -0.47
PDPN-203ENST00000376061 LOC285556D6RIA3 1793 aa12.1□□□□□ -0.47
PDPN-203ENST00000376061 RAD21O60216 631 aa12.1□□□□□ -0.47
PDPN-203ENST00000376061 USP2O75604 605 aaPredicted RBP12.1□□□□□ -0.47
PDPN-203ENST00000376061 SMARCA1P28370 1054 aa12.1□□□□□ -0.47
PDPN-203ENST00000376061 SLC1A4P43007 532 aa12.1□□□□□ -0.47
PDPN-203ENST00000376061 RESTQ13127 1097 aa12.1□□□□□ -0.47
PDPN-203ENST00000376061 PRKG1Q13976 671 aa12.1□□□□□ -0.47
PDPN-203ENST00000376061 PFKFB3Q16875 520 aaPredicted RBP12.1□□□□□ -0.47
PDPN-203ENST00000376061 TTBK2Q6IQ55 1244 aa12.1□□□□□ -0.47
PDPN-203ENST00000376061 CLEC17AQ6ZS10 378 aa12.1□□□□□ -0.47
PDPN-203ENST00000376061 PIBF1Q8WXW3 757 aa12.1□□□□□ -0.47
PDPN-203ENST00000376061 SHISA4Q96DD7 197 aa12.1□□□□□ -0.47
PDPN-203ENST00000376061 NUP88Q99567 741 aaPredicted RBP12.1□□□□□ -0.47
PDPN-203ENST00000376061 FEZ1Q99689 392 aa12.1□□□□□ -0.47
PDPN-203ENST00000376061 VCPKMTQ9H867 229 aa12.1□□□□□ -0.47
PDPN-203ENST00000376061 NMRK2Q9NPI5 230 aa12.1□□□□□ -0.47
PDPN-203ENST00000376061 PICK1Q9NRD5 415 aa12.1□□□□□ -0.47
PDPN-203ENST00000376061 TRPM7Q96QT4 1865 aa12.09□□□□□ -0.47
PDPN-203ENST00000376061 BAG4O95429 457 aaKnown RBP12.09□□□□□ -0.47
PDPN-203ENST00000376061 SCG2P13521 617 aa12.09□□□□□ -0.47
PDPN-203ENST00000376061 PTPRAP18433 802 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms