RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 DCAF8Q5TAQ9 597 aa9.35□□□□□ -0.91
UBR4-202ENST00000375224 COL23A1Q86Y22 540 aaPredicted RBP9.35□□□□□ -0.91
UBR4-202ENST00000375224 TRIML1Q8N9V2 468 aa9.35□□□□□ -0.91
UBR4-202ENST00000375224 ERCC4Q92889 916 aaPredicted RBP9.35□□□□□ -0.91
UBR4-202ENST00000375224 SPTLC3Q9NUV7 552 aa9.35□□□□□ -0.91
UBR4-202ENST00000375224 OGFRQ9NZT2 677 aa9.35□□□□□ -0.91
UBR4-202ENST00000375224 SAP30BPQ9UHR5 308 aaKnown RBP9.35□□□□□ -0.91
UBR4-202ENST00000375224 ANKRD31Q8N7Z5 1873 aa9.35□□□□□ -0.91
UBR4-202ENST00000375224 MYH1P12882 1939 aa9.35□□□□□ -0.91
UBR4-202ENST00000375224 PRR29P0C7W0 189 aa9.35□□□□□ -0.91
UBR4-202ENST00000375224 SMARCA1P28370 1054 aa9.35□□□□□ -0.91
UBR4-202ENST00000375224 PLCD1P51178 756 aa9.35□□□□□ -0.91
UBR4-202ENST00000375224 RHBDL3P58872 404 aa9.35□□□□□ -0.91
UBR4-202ENST00000375224 DPP8Q6V1X1 898 aaPredicted RBP9.35□□□□□ -0.91
UBR4-202ENST00000375224 EP400NLQ6ZTU2 488 aa9.35□□□□□ -0.91
UBR4-202ENST00000375224 TNFRSF25Q93038 417 aa9.35□□□□□ -0.91
UBR4-202ENST00000375224 hCG_1642624A0A1W2PR95 340 aa9.34□□□□□ -0.91
UBR4-202ENST00000375224 BIN1O00499 593 aa9.34□□□□□ -0.91
UBR4-202ENST00000375224 PTGS1P23219 599 aa9.34□□□□□ -0.91
UBR4-202ENST00000375224 KIAA1524Q8TCG1 905 aa9.34□□□□□ -0.91
UBR4-202ENST00000375224 CCDC12Q8WUD4 166 aaPredicted RBP9.34□□□□□ -0.91
UBR4-202ENST00000375224 IMPACTQ9P2X3 320 aa9.34□□□□□ -0.91
UBR4-202ENST00000375224 STX8Q9UNK0 236 aa9.34□□□□□ -0.91
UBR4-202ENST00000375224 POLR2DO15514 142 aaKnown RBP9.34□□□□□ -0.91
UBR4-202ENST00000375224 SMC2O95347 1197 aa9.34□□□□□ -0.91
UBR4-202ENST00000375224 TOP1P11387 765 aaKnown RBP9.34□□□□□ -0.91
UBR4-202ENST00000375224 GSDMDP57764 484 aa9.34□□□□□ -0.91
UBR4-202ENST00000375224 PNOCQ13519 176 aa9.34□□□□□ -0.91
UBR4-202ENST00000375224 POSTNQ15063 836 aa9.34□□□□□ -0.91
UBR4-202ENST00000375224 ZNF827Q17R98 1081 aa9.34□□□□□ -0.91
UBR4-202ENST00000375224 SLC4A8Q2Y0W8 1093 aa9.34□□□□□ -0.91
UBR4-202ENST00000375224 CT47A1Q5JQC4 288 aaPredicted RBP9.34□□□□□ -0.91
UBR4-202ENST00000375224 METTL16Q86W50 562 aaKnown RBP9.34□□□□□ -0.91
UBR4-202ENST00000375224 EGFL6Q8IUX8 553 aa9.34□□□□□ -0.91
UBR4-202ENST00000375224 BLIDQ8IZY5 108 aa9.34□□□□□ -0.91
UBR4-202ENST00000375224 FBXW7Q969H0 707 aa9.34□□□□□ -0.91
UBR4-202ENST00000375224 TMEM47Q9BQJ4 181 aa9.34□□□□□ -0.91
UBR4-202ENST00000375224 MAD2L2Q9UI95 211 aa9.34□□□□□ -0.91
UBR4-202ENST00000375224 PCDHA4Q9UN74 947 aa9.34□□□□□ -0.91
UBR4-202ENST00000375224 CEP83Q9Y592 693 aa9.34□□□□□ -0.91
UBR4-202ENST00000375224 DDX60LQ5H9U9 1706 aaKnown RBP9.33□□□□□ -0.92
UBR4-202ENST00000375224 USP17L3A6NCW0 530 aa9.33□□□□□ -0.92
UBR4-202ENST00000375224 USP17L4A6NCW7 530 aa9.33□□□□□ -0.92
UBR4-202ENST00000375224 PALM3A6NDB9 673 aaPredicted RBP9.33□□□□□ -0.92
UBR4-202ENST00000375224 RIMBP2O15034 1052 aa9.33□□□□□ -0.92
UBR4-202ENST00000375224 CBFA2T2O43439 604 aa9.33□□□□□ -0.92
UBR4-202ENST00000375224 USP17L1Q7RTZ2 530 aa9.33□□□□□ -0.92
UBR4-202ENST00000375224 SLC51AQ86UW1 340 aa9.33□□□□□ -0.92
UBR4-202ENST00000375224 TSC1Q92574 1164 aa9.33□□□□□ -0.92
UBR4-202ENST00000375224 SMARCE1Q969G3 411 aa9.33□□□□□ -0.92
UBR4-202ENST00000375224 SHISA4Q96DD7 197 aa9.33□□□□□ -0.92
UBR4-202ENST00000375224 CSRNP2Q9H175 543 aa9.33□□□□□ -0.92
UBR4-202ENST00000375224 KCNF1Q9H3M0 494 aa9.33□□□□□ -0.92
UBR4-202ENST00000375224 DAGLAQ9Y4D2 1042 aa9.33□□□□□ -0.92
UBR4-202ENST00000375224 FOCADQ5VW36 1801 aa9.33□□□□□ -0.92
UBR4-202ENST00000375224 ATP2C1P98194 919 aaPredicted RBP9.33□□□□□ -0.92
UBR4-202ENST00000375224 MDM2Q00987 491 aaPredicted RBP9.33□□□□□ -0.92
UBR4-202ENST00000375224 MYL5Q02045 173 aa9.33□□□□□ -0.92
UBR4-202ENST00000375224 NPY5RQ15761 445 aa9.33□□□□□ -0.92
UBR4-202ENST00000375224 NT5DC1Q5TFE4 455 aa9.33□□□□□ -0.92
UBR4-202ENST00000375224 MLKLQ8NB16 471 aa9.33□□□□□ -0.92
UBR4-202ENST00000375224 DAGLBQ8NCG7 672 aa9.33□□□□□ -0.92
UBR4-202ENST00000375224 SPZ1Q9BXG8 430 aa9.33□□□□□ -0.92
UBR4-202ENST00000375224 SWAP70Q9UH65 585 aa9.33□□□□□ -0.92
UBR4-202ENST00000375224 RSPH14Q9UHP6 348 aa9.33□□□□□ -0.92
UBR4-202ENST00000375224 PCDHA5Q9Y5H7 936 aa9.33□□□□□ -0.92
UBR4-202ENST00000375224 PARP1P09874 1014 aaKnown RBP9.33□□□□□ -0.92
UBR4-202ENST00000375224 ARL6IP4Q66PJ3 421 aaKnown RBP9.33□□□□□ -0.92
UBR4-202ENST00000375224 SERTAD1Q9UHV2 236 aa9.33□□□□□ -0.92
UBR4-202ENST00000375224 QSER1Q2KHR3 1735 aa9.33□□□□□ -0.92
UBR4-202ENST00000375224 MYO3BQ8WXR4 1341 aa9.32□□□□□ -0.92
UBR4-202ENST00000375224 MMP10P09238 476 aa9.32□□□□□ -0.92
UBR4-202ENST00000375224 ZNF174Q15697 407 aa9.32□□□□□ -0.92
UBR4-202ENST00000375224 SPECC1Q5M775 1068 aa9.32□□□□□ -0.92
UBR4-202ENST00000375224 HHIPL2Q6UWX4 724 aa9.32□□□□□ -0.92
UBR4-202ENST00000375224 PIK3AP1Q6ZUJ8 805 aa9.32□□□□□ -0.92
UBR4-202ENST00000375224 PODNQ7Z5L7 613 aa9.32□□□□□ -0.92
UBR4-202ENST00000375224 SLC44A5Q8NCS7 719 aa9.32□□□□□ -0.92
UBR4-202ENST00000375224 A0A087WWV3 80 aa9.32□□□□□ -0.92
UBR4-202ENST00000375224 CCDC194A0A1B0GVG4 234 aa9.32□□□□□ -0.92
UBR4-202ENST00000375224 NRDCO43847 1150 aa9.32□□□□□ -0.92
UBR4-202ENST00000375224 STAG2Q8N3U4 1231 aa9.32□□□□□ -0.92
UBR4-202ENST00000375224 NCAPGQ9BPX3 1015 aa9.32□□□□□ -0.92
UBR4-202ENST00000375224 TTF2Q9UNY4 1162 aaKnown RBP9.32□□□□□ -0.92
UBR4-202ENST00000375224 PLIN4Q96Q06 1357 aa9.32□□□□□ -0.92
UBR4-202ENST00000375224 KLRF2D3W0D1 207 aa9.32□□□□□ -0.92
UBR4-202ENST00000375224 hCG_1984214I3L0E3 225 aa9.32□□□□□ -0.92
UBR4-202ENST00000375224 ACTN4O43707 911 aaKnown RBP9.32□□□□□ -0.92
UBR4-202ENST00000375224 SLFN14P0C7P3 912 aa9.32□□□□□ -0.92
UBR4-202ENST00000375224 NOVP48745 357 aa9.32□□□□□ -0.92
UBR4-202ENST00000375224 FKBP1AP62942 108 aaKnown RBP9.32□□□□□ -0.92
UBR4-202ENST00000375224 GRIN1Q05586 938 aa9.32□□□□□ -0.92
UBR4-202ENST00000375224 PTGDRQ13258 359 aa9.32□□□□□ -0.92
UBR4-202ENST00000375224 EARS2Q5JPH6 523 aaKnown RBP9.32□□□□□ -0.92
UBR4-202ENST00000375224 STYK1Q6J9G0 422 aa9.32□□□□□ -0.92
UBR4-202ENST00000375224 ZNF713Q8N859 430 aaPredicted RBP9.32□□□□□ -0.92
UBR4-202ENST00000375224 MRIQ9BWK5 157 aa9.32□□□□□ -0.92
UBR4-202ENST00000375224 BARHL2Q9NY43 387 aa9.32□□□□□ -0.92
UBR4-202ENST00000375224 SNED1Q8TER0 1413 aa9.31□□□□□ -0.92
UBR4-202ENST00000375224 FAM205CA6NFA0 338 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms