RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 FANCCQ00597 558 aa20.83■□□□□ 0.93
RXRB-202ENST00000374685 LRRC47Q8N1G4 583 aaKnown RBP20.83■□□□□ 0.93
RXRB-202ENST00000374685 CERS5Q8N5B7 392 aa20.83■□□□□ 0.93
RXRB-202ENST00000374685 HOOK1Q9UJC3 728 aaKnown RBP20.83■□□□□ 0.93
RXRB-202ENST00000374685 FRMPD2Q68DX3 1309 aaPredicted RBP20.83■□□□□ 0.93
RXRB-202ENST00000374685 SMTNL1A8MU46 457 aa20.83■□□□□ 0.92
RXRB-202ENST00000374685 KLRF2D3W0D1 207 aa20.83■□□□□ 0.92
RXRB-202ENST00000374685 HOXA10P31260 410 aaPredicted RBP20.83■□□□□ 0.92
RXRB-202ENST00000374685 GOLGA8FQ08AF8 430 aa20.83■□□□□ 0.92
RXRB-202ENST00000374685 GOLGA8DPQ0D2H9 430 aa20.83■□□□□ 0.92
RXRB-202ENST00000374685 CRAMP1Q96RY5 1269 aa20.83■□□□□ 0.92
RXRB-202ENST00000374685 PLIN2Q99541 437 aa20.83■□□□□ 0.92
RXRB-202ENST00000374685 STX17P56962 302 aa20.82■□□□□ 0.92
RXRB-202ENST00000374685 MYL5Q02045 173 aa20.82■□□□□ 0.92
RXRB-202ENST00000374685 TPD52L1Q16890 204 aaPredicted RBP20.82■□□□□ 0.92
RXRB-202ENST00000374685 RGS22Q8NE09 1264 aa20.82■□□□□ 0.92
RXRB-202ENST00000374685 BLZF1Q9H2G9 400 aa20.82■□□□□ 0.92
RXRB-202ENST00000374685 SRGNP10124 158 aa20.82■□□□□ 0.92
RXRB-202ENST00000374685 WWC2Q6AWC2 1192 aa20.82■□□□□ 0.92
RXRB-202ENST00000374685 RASSF8Q8NHQ8 419 aa20.82■□□□□ 0.92
RXRB-202ENST00000374685 TMX4Q9H1E5 349 aaPredicted RBP20.82■□□□□ 0.92
RXRB-202ENST00000374685 ATP6V0A2Q9Y487 856 aa20.82■□□□□ 0.92
RXRB-202ENST00000374685 PCDHAC2Q9Y5I4 1007 aa20.82■□□□□ 0.92
RXRB-202ENST00000374685 BLIDQ8IZY5 108 aa20.82■□□□□ 0.92
RXRB-202ENST00000374685 PARP3Q9Y6F1 533 aa20.82■□□□□ 0.92
RXRB-202ENST00000374685 USP27XA6NNY8 438 aa20.81■□□□□ 0.92
RXRB-202ENST00000374685 ACTN4O43707 911 aaKnown RBP20.81■□□□□ 0.92
RXRB-202ENST00000374685 RBM5P52756 815 aaKnown RBP eCLIP20.81■□□□□ 0.92
RXRB-202ENST00000374685 INF2Q27J81 1249 aa20.81■□□□□ 0.92
RXRB-202ENST00000374685 SP8Q8IXZ3 490 aa20.81■□□□□ 0.92
RXRB-202ENST00000374685 TNFRSF25Q93038 417 aa20.81■□□□□ 0.92
RXRB-202ENST00000374685 SPTLC3Q9NUV7 552 aa20.81■□□□□ 0.92
RXRB-202ENST00000374685 FAM237AA0A1B0GTK4 181 aa20.81■□□□□ 0.92
RXRB-202ENST00000374685 CCDC194A0A1B0GVG4 234 aa20.81■□□□□ 0.92
RXRB-202ENST00000374685 FAM196BA6NMK8 535 aa20.81■□□□□ 0.92
RXRB-202ENST00000374685 CDK11BP21127 795 aaKnown RBP20.81■□□□□ 0.92
RXRB-202ENST00000374685 UBASH3AP57075 661 aa20.81■□□□□ 0.92
RXRB-202ENST00000374685 MDM2Q00987 491 aaPredicted RBP20.81■□□□□ 0.92
RXRB-202ENST00000374685 FMR1Q06787 632 aaKnown RBP eCLIP20.81■□□□□ 0.92
RXRB-202ENST00000374685 TCP10Q12799 353 aa20.81■□□□□ 0.92
RXRB-202ENST00000374685 CREBRFQ8IUR6 639 aa20.81■□□□□ 0.92
RXRB-202ENST00000374685 KIAA0825Q8IV33 1275 aa20.81■□□□□ 0.92
RXRB-202ENST00000374685 NLGN1Q8N2Q7 840 aa20.81■□□□□ 0.92
RXRB-202ENST00000374685 DDX4Q9NQI0 724 aaKnown RBP20.81■□□□□ 0.92
RXRB-202ENST00000374685 BRWD3Q6RI45 1802 aa20.8■□□□□ 0.92
RXRB-202ENST00000374685 KIAA1551Q9HCM1 1747 aa20.8■□□□□ 0.92
RXRB-202ENST00000374685 MPHOSPH10O00566 681 aaKnown RBP20.8■□□□□ 0.92
RXRB-202ENST00000374685 GRM4Q14833 912 aa20.8■□□□□ 0.92
RXRB-202ENST00000374685 C15orf52Q6ZUT6 534 aaKnown RBP20.8■□□□□ 0.92
RXRB-202ENST00000374685 TBC1D22AQ8WUA7 517 aa20.8■□□□□ 0.92
RXRB-202ENST00000374685 CDC25BP30305 580 aa20.8■□□□□ 0.92
RXRB-202ENST00000374685 PDCL2Q8N4E4 241 aa20.8■□□□□ 0.92
RXRB-202ENST00000374685 HSD3B7Q9H2F3 369 aa20.8■□□□□ 0.92
RXRB-202ENST00000374685 ZNF287Q9HBT7 754 aa20.8■□□□□ 0.92
RXRB-202ENST00000374685 USP40Q9NVE5 1235 aa20.8■□□□□ 0.92
RXRB-202ENST00000374685 TMEM232C9JQI7 657 aa20.79■□□□□ 0.92
RXRB-202ENST00000374685 PLCG2P16885 1265 aa20.79■□□□□ 0.92
RXRB-202ENST00000374685 C16orf86Q6ZW13 317 aa20.79■□□□□ 0.92
RXRB-202ENST00000374685 PP2D1A8MPX8 630 aa20.79■□□□□ 0.92
RXRB-202ENST00000374685 USP17L5A8MUK1 530 aa20.79■□□□□ 0.92
RXRB-202ENST00000374685 NAPAP54920 295 aa20.79■□□□□ 0.92
RXRB-202ENST00000374685 SLF2Q8IX21 1173 aa20.79■□□□□ 0.92
RXRB-202ENST00000374685 PARP1P09874 1014 aaKnown RBP20.78■□□□□ 0.92
RXRB-202ENST00000374685 BPIFA3Q9BQP9 254 aa20.78■□□□□ 0.92
RXRB-202ENST00000374685 NFE2L3Q9Y4A8 694 aa20.78■□□□□ 0.92
RXRB-202ENST00000374685 CHRNA5P30532 468 aa20.78■□□□□ 0.92
RXRB-202ENST00000374685 IL17AQ16552 155 aa20.78■□□□□ 0.92
RXRB-202ENST00000374685 ZNF579Q8NAF0 562 aaKnown RBP20.78■□□□□ 0.92
RXRB-202ENST00000374685 GPCPD1Q9NPB8 672 aa20.78■□□□□ 0.92
RXRB-202ENST00000374685 LAMB1P07942 1786 aa20.78■□□□□ 0.92
RXRB-202ENST00000374685 AKR1B1P15121 316 aa20.77■□□□□ 0.92
RXRB-202ENST00000374685 PCDHA4Q9UN74 947 aa20.77■□□□□ 0.92
RXRB-202ENST00000374685 NPR1P16066 1061 aa20.77■□□□□ 0.92
RXRB-202ENST00000374685 NFIAQ12857 509 aa20.77■□□□□ 0.92
RXRB-202ENST00000374685 PAGE5Q96GU1 130 aa20.77■□□□□ 0.92
RXRB-202ENST00000374685 PIGSQ96S52 555 aa20.77■□□□□ 0.92
RXRB-202ENST00000374685 COA1Q9GZY4 146 aa20.77■□□□□ 0.92
RXRB-202ENST00000374685 MAPK8IP1Q9UQF2 711 aa20.77■□□□□ 0.92
RXRB-202ENST00000374685 CALML3P27482 149 aa20.77■□□□□ 0.91
RXRB-202ENST00000374685 ANKRD7Q92527 254 aa20.77■□□□□ 0.91
RXRB-202ENST00000374685 SAMSN1Q9NSI8 373 aaKnown RBP20.77■□□□□ 0.91
RXRB-202ENST00000374685 GNAQP50148 359 aa20.76■□□□□ 0.91
RXRB-202ENST00000374685 ATP2C1P98194 919 aaPredicted RBP20.76■□□□□ 0.91
RXRB-202ENST00000374685 KARSQ15046 597 aaKnown RBP20.76■□□□□ 0.91
RXRB-202ENST00000374685 FERMT2Q96AC1 680 aa20.76■□□□□ 0.91
RXRB-202ENST00000374685 FEZ1Q99689 392 aa20.76■□□□□ 0.91
RXRB-202ENST00000374685 MAST2Q6P0Q8 1798 aa20.76■□□□□ 0.91
RXRB-202ENST00000374685 SPDYE4A6NLX3 237 aa20.76■□□□□ 0.91
RXRB-202ENST00000374685 TNNT1P13805 278 aa20.76■□□□□ 0.91
RXRB-202ENST00000374685 LETM2Q2VYF4 491 aa20.76■□□□□ 0.91
RXRB-202ENST00000374685 ZSCAN29Q8IWY8 852 aaPredicted RBP20.76■□□□□ 0.91
RXRB-202ENST00000374685 NEDD1Q8NHV4 660 aa20.76■□□□□ 0.91
RXRB-202ENST00000374685 SNED1Q8TER0 1413 aa20.75■□□□□ 0.91
RXRB-202ENST00000374685 IKBKBO14920 756 aa20.75■□□□□ 0.91
RXRB-202ENST00000374685 SFPQP23246 707 aaKnown RBP eCLIP20.75■□□□□ 0.91
RXRB-202ENST00000374685 ARMCX5Q6P1M9 558 aa20.75■□□□□ 0.91
RXRB-202ENST00000374685 C2CD5Q86YS7 1000 aa20.75■□□□□ 0.91
RXRB-202ENST00000374685 ZFPM1Q8IX07 1006 aa20.75■□□□□ 0.91
RXRB-202ENST00000374685 TMEM60Q9H2L4 133 aa20.75■□□□□ 0.91
RXRB-202ENST00000374685 PALM3A6NDB9 673 aaPredicted RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms