RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 SNX17Q15036 470 aa13.32□□□□□ -0.28
CSNK1E-202ENST00000366216 NECTIN1Q15223 517 aa13.32□□□□□ -0.28
CSNK1E-202ENST00000366216 ZSCAN25Q6NSZ9 544 aa13.32□□□□□ -0.28
CSNK1E-202ENST00000366216 PI16Q6UXB8 463 aa13.32□□□□□ -0.28
CSNK1E-202ENST00000366216 ADAMTS19Q8TE59 1207 aa13.32□□□□□ -0.28
CSNK1E-202ENST00000366216 RNPC3Q96LT9 517 aaKnown RBP13.32□□□□□ -0.28
CSNK1E-202ENST00000366216 PAGR1Q9BTK6 254 aa13.32□□□□□ -0.28
CSNK1E-202ENST00000366216 WDR18Q9BV38 432 aa13.32□□□□□ -0.28
CSNK1E-202ENST00000366216 PDLIM7Q9NR12 457 aa13.32□□□□□ -0.28
CSNK1E-202ENST00000366216 PALD1Q9ULE6 856 aa13.32□□□□□ -0.28
CSNK1E-202ENST00000366216 COL11A1P12107 1806 aaPredicted RBP13.32□□□□□ -0.28
CSNK1E-202ENST00000366216 PARP14Q460N5 1801 aa13.32□□□□□ -0.28
CSNK1E-202ENST00000366216 MYH8P13535 1937 aa13.31□□□□□ -0.28
CSNK1E-202ENST00000366216 K7ELQ4 463 aaPredicted RBP13.31□□□□□ -0.28
CSNK1E-202ENST00000366216 CYP2E1P05181 493 aaPredicted RBP13.31□□□□□ -0.28
CSNK1E-202ENST00000366216 MCM2P49736 904 aa13.31□□□□□ -0.28
CSNK1E-202ENST00000366216 BACE1P56817 501 aa13.31□□□□□ -0.28
CSNK1E-202ENST00000366216 TRIM60Q495X7 471 aa13.31□□□□□ -0.28
CSNK1E-202ENST00000366216 GJC2Q5T442 439 aaPredicted RBP13.31□□□□□ -0.28
CSNK1E-202ENST00000366216 SH3RF1Q7Z6J0 888 aa13.31□□□□□ -0.28
CSNK1E-202ENST00000366216 ZNF589Q86UQ0 364 aaPredicted RBP13.31□□□□□ -0.28
CSNK1E-202ENST00000366216 IFNLR1Q8IU57 520 aaPredicted RBP13.31□□□□□ -0.28
CSNK1E-202ENST00000366216 SPATA5Q8NB90 893 aa13.31□□□□□ -0.28
CSNK1E-202ENST00000366216 GTF3C2Q8WUA4 911 aaPredicted RBP13.31□□□□□ -0.28
CSNK1E-202ENST00000366216 ASB2Q96Q27 587 aa13.31□□□□□ -0.28
CSNK1E-202ENST00000366216 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.31□□□□□ -0.28
CSNK1E-202ENST00000366216 CWC22Q9HCG8 908 aaKnown RBP13.31□□□□□ -0.28
CSNK1E-202ENST00000366216 HMG20BQ9P0W2 317 aa13.31□□□□□ -0.28
CSNK1E-202ENST00000366216 ABCF2Q9UG63 623 aa13.31□□□□□ -0.28
CSNK1E-202ENST00000366216 SNX14Q9Y5W7 946 aa13.31□□□□□ -0.28
CSNK1E-202ENST00000366216 MUC6Q6W4X9 2439 aa13.3□□□□□ -0.28
CSNK1E-202ENST00000366216 TRIM43BA6NCK2 446 aa13.3□□□□□ -0.28
CSNK1E-202ENST00000366216 C19orf81C9J6K1 198 aa13.3□□□□□ -0.28
CSNK1E-202ENST00000366216 KBTBD13C9JR72 458 aa13.3□□□□□ -0.28
CSNK1E-202ENST00000366216 DNAJB2P25686 324 aa13.3□□□□□ -0.28
CSNK1E-202ENST00000366216 ARRDC4Q8NCT1 418 aa13.3□□□□□ -0.28
CSNK1E-202ENST00000366216 APPBP2Q92624 585 aa13.3□□□□□ -0.28
CSNK1E-202ENST00000366216 TRIM43Q96BQ3 446 aaPredicted RBP13.3□□□□□ -0.28
CSNK1E-202ENST00000366216 UHRF1Q96T88 793 aaPredicted RBP13.3□□□□□ -0.28
CSNK1E-202ENST00000366216 TM6SF1Q9BZW5 370 aa13.3□□□□□ -0.28
CSNK1E-202ENST00000366216 ZNF576Q9H609 170 aa13.3□□□□□ -0.28
CSNK1E-202ENST00000366216 THEGQ9P2T0 379 aa13.3□□□□□ -0.28
CSNK1E-202ENST00000366216 RBM8AQ9Y5S9 174 aaKnown RBP13.3□□□□□ -0.28
CSNK1E-202ENST00000366216 XIRP2A4UGR9 3374 aa13.3□□□□□ -0.28
CSNK1E-202ENST00000366216 CD2BP2O95400 341 aaKnown RBP13.29□□□□□ -0.28
CSNK1E-202ENST00000366216 ITGB8P26012 769 aa13.29□□□□□ -0.28
CSNK1E-202ENST00000366216 ADD2P35612 726 aa13.29□□□□□ -0.28
CSNK1E-202ENST00000366216 EPHB4P54760 987 aa13.29□□□□□ -0.28
CSNK1E-202ENST00000366216 ATP2B2Q01814 1243 aa13.29□□□□□ -0.28
CSNK1E-202ENST00000366216 UBE3CQ15386 1083 aa13.29□□□□□ -0.28
CSNK1E-202ENST00000366216 TSGA10IPQ3SY00 556 aa13.29□□□□□ -0.28
CSNK1E-202ENST00000366216 RNF20Q5VTR2 975 aa13.29□□□□□ -0.28
CSNK1E-202ENST00000366216 CREB3L3Q68CJ9 461 aa13.29□□□□□ -0.28
CSNK1E-202ENST00000366216 NPLOC4Q8TAT6 608 aa13.29□□□□□ -0.28
CSNK1E-202ENST00000366216 PPM1EQ8WY54 764 aa13.29□□□□□ -0.28
CSNK1E-202ENST00000366216 DSCC1Q9BVC3 393 aa13.29□□□□□ -0.28
CSNK1E-202ENST00000366216 EMILIN3Q9NT22 766 aa13.29□□□□□ -0.28
CSNK1E-202ENST00000366216 HERC5Q9UII4 1024 aaKnown RBP13.29□□□□□ -0.28
CSNK1E-202ENST00000366216 A0A0G2JMZ2 1700 aa13.29□□□□□ -0.28
CSNK1E-202ENST00000366216 SYNGAP1Q96PV0 1343 aa13.29□□□□□ -0.28
CSNK1E-202ENST00000366216 SLC15A5A6NIM6 579 aa13.28□□□□□ -0.28
CSNK1E-202ENST00000366216 ASNSP08243 561 aa13.28□□□□□ -0.28
CSNK1E-202ENST00000366216 CYBAP13498 195 aa13.28□□□□□ -0.28
CSNK1E-202ENST00000366216 CYP2C19P33261 490 aa13.28□□□□□ -0.28
CSNK1E-202ENST00000366216 NEK4P51957 841 aa13.28□□□□□ -0.28
CSNK1E-202ENST00000366216 MRPS5P82675 430 aaKnown RBP13.28□□□□□ -0.28
CSNK1E-202ENST00000366216 C1orf53Q5VUE5 145 aa13.28□□□□□ -0.28
CSNK1E-202ENST00000366216 SPTY2D1Q68D10 685 aaPredicted RBP13.28□□□□□ -0.28
CSNK1E-202ENST00000366216 RASEFQ8IZ41 740 aa13.28□□□□□ -0.28
CSNK1E-202ENST00000366216 NSUN4Q96CB9 384 aaKnown RBP13.28□□□□□ -0.28
CSNK1E-202ENST00000366216 SEC62Q99442 399 aaKnown RBP13.28□□□□□ -0.28
CSNK1E-202ENST00000366216 PIH1D3Q9NQM4 214 aaKnown RBP13.28□□□□□ -0.28
CSNK1E-202ENST00000366216 PDS5AQ29RF7 1337 aaKnown RBP13.28□□□□□ -0.28
CSNK1E-202ENST00000366216 USP17L10C9JJH3 530 aa13.27□□□□□ -0.29
CSNK1E-202ENST00000366216 SLC27A2O14975 620 aa13.27□□□□□ -0.29
CSNK1E-202ENST00000366216 GDF11O95390 407 aa13.27□□□□□ -0.29
CSNK1E-202ENST00000366216 CHGBP05060 677 aa13.27□□□□□ -0.29
CSNK1E-202ENST00000366216 HOXC6P09630 235 aa13.27□□□□□ -0.29
CSNK1E-202ENST00000366216 CCNA1P78396 465 aa13.27□□□□□ -0.29
CSNK1E-202ENST00000366216 AKNAD1Q5T1N1 836 aa13.27□□□□□ -0.29
CSNK1E-202ENST00000366216 WDR78Q5VTH9 848 aa13.27□□□□□ -0.29
CSNK1E-202ENST00000366216 CCDC129Q6ZRS4 1044 aa13.27□□□□□ -0.29
CSNK1E-202ENST00000366216 SH3RF3Q8TEJ3 882 aaPredicted RBP13.27□□□□□ -0.29
CSNK1E-202ENST00000366216 OSBP2Q969R2 916 aa13.27□□□□□ -0.29
CSNK1E-202ENST00000366216 TIFAQ96CG3 184 aa13.27□□□□□ -0.29
CSNK1E-202ENST00000366216 GAS2L1Q99501 681 aaPredicted RBP13.27□□□□□ -0.29
CSNK1E-202ENST00000366216 C1QTNF1Q9BXJ1 281 aa13.27□□□□□ -0.29
CSNK1E-202ENST00000366216 SSUH2Q9Y2M2 353 aa13.27□□□□□ -0.29
CSNK1E-202ENST00000366216 RABGAP1Q9Y3P9 1069 aa13.27□□□□□ -0.29
CSNK1E-202ENST00000366216 ARIH1Q9Y4X5 557 aaPredicted RBP13.27□□□□□ -0.29
CSNK1E-202ENST00000366216 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.26□□□□□ -0.29
CSNK1E-202ENST00000366216 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.26□□□□□ -0.29
CSNK1E-202ENST00000366216 M0R2C6 588 aa13.26□□□□□ -0.29
CSNK1E-202ENST00000366216 IGSF3O75054 1194 aa13.26□□□□□ -0.29
CSNK1E-202ENST00000366216 PTPREP23469 700 aa13.26□□□□□ -0.29
CSNK1E-202ENST00000366216 ADCYAP1R1P41586 468 aa13.26□□□□□ -0.29
CSNK1E-202ENST00000366216 TLE2Q04725 743 aa13.26□□□□□ -0.29
CSNK1E-202ENST00000366216 GRB14Q14449 540 aa13.26□□□□□ -0.29
CSNK1E-202ENST00000366216 SLC9C2Q5TAH2 1124 aa13.26□□□□□ -0.29
CSNK1E-202ENST00000366216 ANO1Q5XXA6 986 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms