RNA–Protein interactions for RNA: ENST00000362061.3

CACNA1S-201, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CACNA1S, Length 6,166 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-201ENST00000362061 RNF181Q9P0P0 153 aa11.71□□□□□ -0.54
CACNA1S-201ENST00000362061 HESX1Q9UBX0 185 aa11.71□□□□□ -0.54
CACNA1S-201ENST00000362061 DMP1Q13316 513 aaPredicted RBP11.71□□□□□ -0.54
CACNA1S-201ENST00000362061 CDC37L1Q7L3B6 337 aa11.71□□□□□ -0.54
CACNA1S-201ENST00000362061 CCDC26Q8TAB7 109 aa11.71□□□□□ -0.54
CACNA1S-201ENST00000362061 GPKOWQ92917 476 aaPredicted RBP eCLIP11.71□□□□□ -0.54
CACNA1S-201ENST00000362061 PUS3Q9BZE2 481 aaKnown RBP11.71□□□□□ -0.54
CACNA1S-201ENST00000362061 USP44Q9H0E7 712 aa11.71□□□□□ -0.54
CACNA1S-201ENST00000362061 PNMA3Q9UL41 463 aa11.71□□□□□ -0.54
CACNA1S-201ENST00000362061 FOSP01100 380 aaPredicted RBP11.7□□□□□ -0.54
CACNA1S-201ENST00000362061 ZSCAN20P17040 1043 aaPredicted RBP11.7□□□□□ -0.54
CACNA1S-201ENST00000362061 SLC9C1Q4G0N8 1177 aa11.7□□□□□ -0.54
CACNA1S-201ENST00000362061 SND1Q7KZF4 910 aaKnown RBP eCLIP11.7□□□□□ -0.54
CACNA1S-201ENST00000362061 FANCBQ8NB91 859 aa11.7□□□□□ -0.54
CACNA1S-201ENST00000362061 TRIM7Q9C029 511 aa11.7□□□□□ -0.54
CACNA1S-201ENST00000362061 PPP2R5CQ13362 524 aa11.7□□□□□ -0.54
CACNA1S-201ENST00000362061 CCDC6Q16204 474 aa11.7□□□□□ -0.54
CACNA1S-201ENST00000362061 RETREG2Q8NC44 543 aa11.7□□□□□ -0.54
CACNA1S-201ENST00000362061 ANKFY1Q9P2R3 1169 aa11.7□□□□□ -0.54
CACNA1S-201ENST00000362061 NOC2LQ9Y3T9 749 aaKnown RBP11.7□□□□□ -0.54
CACNA1S-201ENST00000362061 BLMP54132 1417 aaPredicted RBP11.7□□□□□ -0.54
CACNA1S-201ENST00000362061 SPDYE16A6NNV3 312 aaPredicted RBP11.7□□□□□ -0.54
CACNA1S-201ENST00000362061 UBXN2AP68543 259 aa11.7□□□□□ -0.54
CACNA1S-201ENST00000362061 TRIM14Q14142 442 aa11.7□□□□□ -0.54
CACNA1S-201ENST00000362061 SPDYE2Q495Y8 402 aa11.7□□□□□ -0.54
CACNA1S-201ENST00000362061 NEK8Q86SG6 692 aa11.7□□□□□ -0.54
CACNA1S-201ENST00000362061 PIGBQ92521 554 aa11.7□□□□□ -0.54
CACNA1S-201ENST00000362061 EAF2Q96CJ1 260 aaPredicted RBP11.7□□□□□ -0.54
CACNA1S-201ENST00000362061 BLZF1Q9H2G9 400 aa11.7□□□□□ -0.54
CACNA1S-201ENST00000362061 PARP2Q9UGN5 583 aa11.7□□□□□ -0.54
CACNA1S-201ENST00000362061 GPATCH4Q5T3I0 446 aaKnown RBP11.7□□□□□ -0.54
CACNA1S-201ENST00000362061 BEND3Q5T5X7 828 aa11.7□□□□□ -0.54
CACNA1S-201ENST00000362061 EEPD1Q7L9B9 569 aa11.7□□□□□ -0.54
CACNA1S-201ENST00000362061 ZBED2Q9BTP6 218 aa11.7□□□□□ -0.54
CACNA1S-201ENST00000362061 CLSTN2Q9H4D0 955 aa11.7□□□□□ -0.54
CACNA1S-201ENST00000362061 KANSL2Q9H9L4 492 aa11.7□□□□□ -0.54
CACNA1S-201ENST00000362061 LARSQ9P2J5 1176 aaKnown RBP11.7□□□□□ -0.54
CACNA1S-201ENST00000362061 SEPT9Q9UHD8 586 aaPredicted RBP11.7□□□□□ -0.54
CACNA1S-201ENST00000362061 PTPRTO14522 1441 aa11.7□□□□□ -0.54
CACNA1S-201ENST00000362061 XPOTO43592 962 aaKnown RBP11.69□□□□□ -0.54
CACNA1S-201ENST00000362061 OPA1O60313 960 aa11.69□□□□□ -0.54
CACNA1S-201ENST00000362061 GMNNO75496 209 aa11.69□□□□□ -0.54
CACNA1S-201ENST00000362061 TTLL1O95922 423 aa11.69□□□□□ -0.54
CACNA1S-201ENST00000362061 VAV2P52735 878 aa11.69□□□□□ -0.54
CACNA1S-201ENST00000362061 GRAPQ13588 217 aa11.69□□□□□ -0.54
CACNA1S-201ENST00000362061 CLUL1Q15846 466 aa11.69□□□□□ -0.54
CACNA1S-201ENST00000362061 GRAPLQ8TC17 118 aaPredicted RBP11.69□□□□□ -0.54
CACNA1S-201ENST00000362061 TLR3O15455 904 aaKnown RBP11.69□□□□□ -0.54
CACNA1S-201ENST00000362061 FAM178BQ8IXR5 827 aa11.69□□□□□ -0.54
CACNA1S-201ENST00000362061 JPH2Q9BR39 696 aaPredicted RBP11.69□□□□□ -0.54
CACNA1S-201ENST00000362061 DHX36Q9H2U1 1008 aaKnown RBP11.69□□□□□ -0.54
CACNA1S-201ENST00000362061 SERPINB13Q9UIV8 391 aa11.69□□□□□ -0.54
CACNA1S-201ENST00000362061 AFG3L2Q9Y4W6 797 aa11.69□□□□□ -0.54
CACNA1S-201ENST00000362061 NPC1L1Q9UHC9 1359 aa11.69□□□□□ -0.54
CACNA1S-201ENST00000362061 CFAP74Q9C0B2 1584 aa11.69□□□□□ -0.54
CACNA1S-201ENST00000362061 GPIHBP1Q8IV16 184 aa11.69□□□□□ -0.54
CACNA1S-201ENST00000362061 MRRFQ96E11 262 aaKnown RBP11.69□□□□□ -0.54
CACNA1S-201ENST00000362061 MYO1AQ9UBC5 1043 aa11.69□□□□□ -0.54
CACNA1S-201ENST00000362061 PALD1Q9ULE6 856 aa11.69□□□□□ -0.54
CACNA1S-201ENST00000362061 SAMD9Q5K651 1589 aa11.69□□□□□ -0.54
CACNA1S-201ENST00000362061 USP17L8P0C7I0 530 aa11.69□□□□□ -0.54
CACNA1S-201ENST00000362061 ITIH3Q06033 890 aa11.69□□□□□ -0.54
CACNA1S-201ENST00000362061 CASC4Q6P4E1 433 aa11.69□□□□□ -0.54
CACNA1S-201ENST00000362061 KCTD1Q719H9 257 aa11.69□□□□□ -0.54
CACNA1S-201ENST00000362061 BAG1Q99933 345 aaPredicted RBP11.69□□□□□ -0.54
CACNA1S-201ENST00000362061 CFAP65Q6ZU64 1925 aaKnown RBP11.69□□□□□ -0.54
CACNA1S-201ENST00000362061 ERBB3P21860 1342 aa11.69□□□□□ -0.54
CACNA1S-201ENST00000362061 SCG2P13521 617 aa11.69□□□□□ -0.54
CACNA1S-201ENST00000362061 ADORA1P30542 326 aa11.69□□□□□ -0.54
CACNA1S-201ENST00000362061 MCM6Q14566 821 aa11.69□□□□□ -0.54
CACNA1S-201ENST00000362061 FAM173BQ6P4H8 233 aa11.69□□□□□ -0.54
CACNA1S-201ENST00000362061 MICAL1Q8TDZ2 1067 aa11.69□□□□□ -0.54
CACNA1S-201ENST00000362061 ATP6V0A1Q93050 837 aa11.69□□□□□ -0.54
CACNA1S-201ENST00000362061 ARFGAP3Q9NP61 516 aa11.69□□□□□ -0.54
CACNA1S-201ENST00000362061 SCYL2Q6P3W7 929 aa11.68□□□□□ -0.54
CACNA1S-201ENST00000362061 MLKLQ8NB16 471 aa11.68□□□□□ -0.54
CACNA1S-201ENST00000362061 SEC62Q99442 399 aaKnown RBP11.68□□□□□ -0.54
CACNA1S-201ENST00000362061 NUP58Q9BVL2 599 aa11.68□□□□□ -0.54
CACNA1S-201ENST00000362061 ANAPC4Q9UJX5 808 aa11.68□□□□□ -0.54
CACNA1S-201ENST00000362061 PZPP20742 1482 aa11.68□□□□□ -0.54
CACNA1S-201ENST00000362061 DDAH1O94760 285 aa11.68□□□□□ -0.54
CACNA1S-201ENST00000362061 DLATP10515 647 aaKnown RBP11.68□□□□□ -0.54
CACNA1S-201ENST00000362061 KLHL30Q0D2K2 578 aa11.68□□□□□ -0.54
CACNA1S-201ENST00000362061 TBC1D10BQ4KMP7 808 aaPredicted RBP11.68□□□□□ -0.54
CACNA1S-201ENST00000362061 NELFBQ8WX92 580 aa11.68□□□□□ -0.54
CACNA1S-201ENST00000362061 SLC7A3Q8WY07 619 aa11.68□□□□□ -0.54
CACNA1S-201ENST00000362061 PSDA5PKW4 1024 aaPredicted RBP11.68□□□□□ -0.54
CACNA1S-201ENST00000362061 ERVV-1B6SEH8 477 aa11.68□□□□□ -0.54
CACNA1S-201ENST00000362061 RNASE9P60153 205 aaKnown RBP11.68□□□□□ -0.54
CACNA1S-201ENST00000362061 PROSER3Q2NL68 480 aa11.68□□□□□ -0.54
CACNA1S-201ENST00000362061 ATRIPQ8WXE1 791 aa11.68□□□□□ -0.54
CACNA1S-201ENST00000362061 PI4KBQ9UBF8 816 aa11.68□□□□□ -0.54
CACNA1S-201ENST00000362061 RPS6KA4O75676 772 aa11.68□□□□□ -0.54
CACNA1S-201ENST00000362061 CYP4A11Q02928 519 aa11.68□□□□□ -0.54
CACNA1S-201ENST00000362061 UBE3CQ15386 1083 aa11.68□□□□□ -0.54
CACNA1S-201ENST00000362061 TAB2Q9NYJ8 693 aa11.68□□□□□ -0.54
CACNA1S-201ENST00000362061 INO80B-WBP1J3KQ70 363 aa11.68□□□□□ -0.54
CACNA1S-201ENST00000362061 ZNF202O95125 648 aa11.68□□□□□ -0.54
CACNA1S-201ENST00000362061 HSPD1P10809 573 aaKnown RBP11.68□□□□□ -0.54
CACNA1S-201ENST00000362061 BMP3P12645 472 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms