RNA–Protein interactions for RNA: ENST00000361293.9

CHD1L-201, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2 BASIC

Gene CHD1L, Length 2,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-201ENST00000361293 SH3RF1Q7Z6J0 888 aa22.87■■□□□ 1.25
CHD1L-201ENST00000361293 INTS13Q9NVM9 706 aa22.87■■□□□ 1.25
CHD1L-201ENST00000361293 DAGLAQ9Y4D2 1042 aa22.87■■□□□ 1.25
CHD1L-201ENST00000361293 PALM3A6NDB9 673 aaPredicted RBP22.86■■□□□ 1.25
CHD1L-201ENST00000361293 GTF2F1P35269 517 aaKnown RBP eCLIP22.86■■□□□ 1.25
CHD1L-201ENST00000361293 TRAPPC10P48553 1259 aa22.86■■□□□ 1.25
CHD1L-201ENST00000361293 NT5C2P49902 561 aa22.86■■□□□ 1.25
CHD1L-201ENST00000361293 MLKLQ8NB16 471 aa22.86■■□□□ 1.25
CHD1L-201ENST00000361293 STAMQ92783 540 aa22.86■■□□□ 1.25
CHD1L-201ENST00000361293 TRMT1Q9NXH9 659 aaKnown RBP22.86■■□□□ 1.25
CHD1L-201ENST00000361293 PCDHA4Q9UN74 947 aa22.86■■□□□ 1.25
CHD1L-201ENST00000361293 GOLGB1Q14789 3259 aaKnown RBP22.86■■□□□ 1.25
CHD1L-201ENST00000361293 M0R2N6 131 aa22.86■■□□□ 1.25
CHD1L-201ENST00000361293 CALML3P27482 149 aa22.86■■□□□ 1.25
CHD1L-201ENST00000361293 NFE2L3Q9Y4A8 694 aa22.86■■□□□ 1.25
CHD1L-201ENST00000361293 F8W031 263 aaPredicted RBP22.85■■□□□ 1.25
CHD1L-201ENST00000361293 CCDC178Q5BJE1 867 aa22.85■■□□□ 1.25
CHD1L-201ENST00000361293 HEATR3Q7Z4Q2 680 aa22.85■■□□□ 1.25
CHD1L-201ENST00000361293 CERS3Q8IU89 383 aa22.85■■□□□ 1.25
CHD1L-201ENST00000361293 SP8Q8IXZ3 490 aa22.85■■□□□ 1.25
CHD1L-201ENST00000361293 TRIML1Q8N9V2 468 aa22.85■■□□□ 1.25
CHD1L-201ENST00000361293 TBC1D22AQ8WUA7 517 aa22.85■■□□□ 1.25
CHD1L-201ENST00000361293 SH3GLB2Q9NR46 395 aa22.85■■□□□ 1.25
CHD1L-201ENST00000361293 PLCG2P16885 1265 aa22.85■■□□□ 1.25
CHD1L-201ENST00000361293 GNAQP50148 359 aa22.85■■□□□ 1.25
CHD1L-201ENST00000361293 MXD3Q9BW11 206 aa22.85■■□□□ 1.25
CHD1L-201ENST00000361293 SFPQP23246 707 aaKnown RBP eCLIP22.84■■□□□ 1.25
CHD1L-201ENST00000361293 CERS5Q8N5B7 392 aa22.84■■□□□ 1.25
CHD1L-201ENST00000361293 C4orf32Q8N8J7 132 aa22.84■■□□□ 1.25
CHD1L-201ENST00000361293 CCDC150Q8NCX0 1101 aa22.84■■□□□ 1.25
CHD1L-201ENST00000361293 NEDD1Q8NHV4 660 aa22.84■■□□□ 1.25
CHD1L-201ENST00000361293 CEP95Q96GE4 821 aa22.84■■□□□ 1.25
CHD1L-201ENST00000361293 ATP6V0A2Q9Y487 856 aa22.84■■□□□ 1.25
CHD1L-201ENST00000361293 KLRF2D3W0D1 207 aa22.84■■□□□ 1.25
CHD1L-201ENST00000361293 STXBP3O00186 592 aa22.84■■□□□ 1.25
CHD1L-201ENST00000361293 ZNF18P17022 549 aa22.84■■□□□ 1.25
CHD1L-201ENST00000361293 CDC25AP30304 524 aa22.84■■□□□ 1.25
CHD1L-201ENST00000361293 E2F4Q16254 413 aa22.84■■□□□ 1.25
CHD1L-201ENST00000361293 FOCADQ5VW36 1801 aa22.84■■□□□ 1.25
CHD1L-201ENST00000361293 CD44P16070 742 aaKnown RBP22.83■■□□□ 1.25
CHD1L-201ENST00000361293 DPYDQ12882 1025 aa22.83■■□□□ 1.25
CHD1L-201ENST00000361293 PICALMQ13492 652 aa22.83■■□□□ 1.25
CHD1L-201ENST00000361293 USP17L2Q6R6M4 530 aa22.83■■□□□ 1.25
CHD1L-201ENST00000361293 COL23A1Q86Y22 540 aaPredicted RBP22.83■■□□□ 1.25
CHD1L-201ENST00000361293 CCAR2Q8N163 923 aaKnown RBP22.83■■□□□ 1.25
CHD1L-201ENST00000361293 ENOX1Q8TC92 643 aaKnown RBP22.83■■□□□ 1.25
CHD1L-201ENST00000361293 ZNF287Q9HBT7 754 aa22.83■■□□□ 1.25
CHD1L-201ENST00000361293 PCDHA6Q9UN73 950 aa22.83■■□□□ 1.25
CHD1L-201ENST00000361293 PCDHA8Q9Y5H6 950 aa22.83■■□□□ 1.25
CHD1L-201ENST00000361293 SRGNP10124 158 aa22.83■■□□□ 1.24
CHD1L-201ENST00000361293 GOLGA8FQ08AF8 430 aa22.83■■□□□ 1.24
CHD1L-201ENST00000361293 GOLGA8DPQ0D2H9 430 aa22.83■■□□□ 1.24
CHD1L-201ENST00000361293 SMYD4Q8IYR2 804 aaPredicted RBP22.83■■□□□ 1.24
CHD1L-201ENST00000361293 SAMSN1Q9NSI8 373 aaKnown RBP22.83■■□□□ 1.24
CHD1L-201ENST00000361293 BARHL2Q9NY43 387 aa22.83■■□□□ 1.24
CHD1L-201ENST00000361293 HSP90AA2PQ14568 343 aaPredicted RBP22.82■■□□□ 1.24
CHD1L-201ENST00000361293 E4F1Q66K89 784 aaPredicted RBP22.82■■□□□ 1.24
CHD1L-201ENST00000361293 NYAP1Q6ZVC0 841 aa22.82■■□□□ 1.24
CHD1L-201ENST00000361293 VSTM4Q8IW00 320 aa22.82■■□□□ 1.24
CHD1L-201ENST00000361293 CBFA2T2O43439 604 aa22.82■■□□□ 1.24
CHD1L-201ENST00000361293 SLF2Q8IX21 1173 aa22.82■■□□□ 1.24
CHD1L-201ENST00000361293 MTRQ99707 1265 aa22.82■■□□□ 1.24
CHD1L-201ENST00000361293 DACH1Q9UI36 760 aa22.82■■□□□ 1.24
CHD1L-201ENST00000361293 DDX4Q9NQI0 724 aaKnown RBP22.81■■□□□ 1.24
CHD1L-201ENST00000361293 ADAMTSL1Q8N6G6 1762 aa22.81■■□□□ 1.24
CHD1L-201ENST00000361293 DOK7Q18PE1 504 aa22.81■■□□□ 1.24
CHD1L-201ENST00000361293 INF2Q27J81 1249 aa22.81■■□□□ 1.24
CHD1L-201ENST00000361293 COA1Q9GZY4 146 aa22.81■■□□□ 1.24
CHD1L-201ENST00000361293 BLZF1Q9H2G9 400 aa22.81■■□□□ 1.24
CHD1L-201ENST00000361293 CCDC194A0A1B0GVG4 234 aa22.8■■□□□ 1.24
CHD1L-201ENST00000361293 MYO1BO43795 1136 aa22.8■■□□□ 1.24
CHD1L-201ENST00000361293 RRP9O43818 475 aaKnown RBP22.8■■□□□ 1.24
CHD1L-201ENST00000361293 KLHL10Q6JEL2 608 aa22.8■■□□□ 1.24
CHD1L-201ENST00000361293 PDXDC2PQ6P474 469 aa22.8■■□□□ 1.24
CHD1L-201ENST00000361293 HOMER1Q86YM7 354 aa22.8■■□□□ 1.24
CHD1L-201ENST00000361293 TMEM60Q9H2L4 133 aa22.8■■□□□ 1.24
CHD1L-201ENST00000361293 TMC4Q7Z404 712 aa22.8■■□□□ 1.24
CHD1L-201ENST00000361293 COL11A2P13942 1736 aaPredicted RBP22.79■■□□□ 1.24
CHD1L-201ENST00000361293 PARP1P09874 1014 aaKnown RBP22.79■■□□□ 1.24
CHD1L-201ENST00000361293 STX17P56962 302 aa22.79■■□□□ 1.24
CHD1L-201ENST00000361293 CLEC10AQ8IUN9 316 aa22.79■■□□□ 1.24
CHD1L-201ENST00000361293 ZNF710Q8N1W2 664 aa22.79■■□□□ 1.24
CHD1L-201ENST00000361293 DAGLBQ8NCG7 672 aa22.79■■□□□ 1.24
CHD1L-201ENST00000361293 CCDC148Q8NFR7 591 aa22.79■■□□□ 1.24
CHD1L-201ENST00000361293 ZNF592Q92610 1267 aa22.79■■□□□ 1.24
CHD1L-201ENST00000361293 SPZ1Q9BXG8 430 aa22.79■■□□□ 1.24
CHD1L-201ENST00000361293 CUL4BQ13620 913 aa22.79■■□□□ 1.24
CHD1L-201ENST00000361293 CEP135Q66GS9 1140 aa22.79■■□□□ 1.24
CHD1L-201ENST00000361293 ARL6IP4Q66PJ3 421 aaKnown RBP22.79■■□□□ 1.24
CHD1L-201ENST00000361293 IQUBQ8NA54 791 aa22.79■■□□□ 1.24
CHD1L-201ENST00000361293 CCDC34Q96HJ3 373 aa22.79■■□□□ 1.24
CHD1L-201ENST00000361293 KCND1Q9NSA2 647 aa22.79■■□□□ 1.24
CHD1L-201ENST00000361293 NRXN2Q9P2S2 1712 aa22.78■■□□□ 1.24
CHD1L-201ENST00000361293 CDK11BP21127 795 aaKnown RBP22.78■■□□□ 1.24
CHD1L-201ENST00000361293 ERCC5P28715 1186 aaPredicted RBP22.78■■□□□ 1.24
CHD1L-201ENST00000361293 SCNN1DP51172 638 aa22.78■■□□□ 1.24
CHD1L-201ENST00000361293 AKT1S1Q96B36 256 aa22.78■■□□□ 1.24
CHD1L-201ENST00000361293 GSDMAQ96QA5 445 aa22.78■■□□□ 1.24
CHD1L-201ENST00000361293 ZC3H12CQ9C0D7 883 aaKnown RBP22.78■■□□□ 1.24
CHD1L-201ENST00000361293 TTF2Q9UNY4 1162 aaKnown RBP22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms