RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 CERKQ8TCT0 537 aa18.01■□□□□ 0.47
PHTF1-201ENST00000357783 RBM17Q96I25 401 aaKnown RBP18.01■□□□□ 0.47
PHTF1-201ENST00000357783 DPYDQ12882 1025 aa18.01■□□□□ 0.47
PHTF1-201ENST00000357783 SLC35G1Q2M3R5 365 aa18.01■□□□□ 0.47
PHTF1-201ENST00000357783 TEX11Q8IYF3 940 aa18.01■□□□□ 0.47
PHTF1-201ENST00000357783 PSDA5PKW4 1024 aaPredicted RBP18■□□□□ 0.47
PHTF1-201ENST00000357783 CD44P16070 742 aaKnown RBP18■□□□□ 0.47
PHTF1-201ENST00000357783 STX17P56962 302 aa18■□□□□ 0.47
PHTF1-201ENST00000357783 RASGRP2Q7LDG7 609 aa18■□□□□ 0.47
PHTF1-201ENST00000357783 TMEM47Q9BQJ4 181 aa18■□□□□ 0.47
PHTF1-201ENST00000357783 PCDHA4Q9UN74 947 aa18■□□□□ 0.47
PHTF1-201ENST00000357783 IGSF3O75054 1194 aa18■□□□□ 0.47
PHTF1-201ENST00000357783 GOLGA8HP0CJ92 632 aa18■□□□□ 0.47
PHTF1-201ENST00000357783 ERCC5P28715 1186 aaPredicted RBP18■□□□□ 0.47
PHTF1-201ENST00000357783 KCNJ6P48051 423 aa18■□□□□ 0.47
PHTF1-201ENST00000357783 CCDC178Q5BJE1 867 aa18■□□□□ 0.47
PHTF1-201ENST00000357783 WWC2Q6AWC2 1192 aa18■□□□□ 0.47
PHTF1-201ENST00000357783 HEATR3Q7Z4Q2 680 aa18■□□□□ 0.47
PHTF1-201ENST00000357783 KIF18AQ8NI77 898 aa18■□□□□ 0.47
PHTF1-201ENST00000357783 CYTH3O43739 400 aa18■□□□□ 0.47
PHTF1-201ENST00000357783 IL1R1P14778 569 aa18■□□□□ 0.47
PHTF1-201ENST00000357783 GNAQP50148 359 aa18■□□□□ 0.47
PHTF1-201ENST00000357783 NCBP1Q09161 790 aaKnown RBP18■□□□□ 0.47
PHTF1-201ENST00000357783 NAA30Q147X3 362 aaPredicted RBP18■□□□□ 0.47
PHTF1-201ENST00000357783 MFSD14BQ5SR56 506 aa18■□□□□ 0.47
PHTF1-201ENST00000357783 BLZF1Q9H2G9 400 aa18■□□□□ 0.47
PHTF1-201ENST00000357783 SH3GLB2Q9NR46 395 aa18■□□□□ 0.47
PHTF1-201ENST00000357783 TCP11L1Q9NUJ3 509 aa18■□□□□ 0.47
PHTF1-201ENST00000357783 SYNRGQ9UMZ2 1314 aa17.99■□□□□ 0.47
PHTF1-201ENST00000357783 NT5C2P49902 561 aa17.99■□□□□ 0.47
PHTF1-201ENST00000357783 IQUBQ8NA54 791 aa17.99■□□□□ 0.47
PHTF1-201ENST00000357783 ANKRD7Q92527 254 aa17.99■□□□□ 0.47
PHTF1-201ENST00000357783 CPVLQ9H3G5 476 aa17.99■□□□□ 0.47
PHTF1-201ENST00000357783 POLLQ9UGP5 575 aa17.99■□□□□ 0.47
PHTF1-201ENST00000357783 GPR75-ASB3A0A0A6YYF3 556 aa17.99■□□□□ 0.47
PHTF1-201ENST00000357783 CDK8P49336 464 aa17.99■□□□□ 0.47
PHTF1-201ENST00000357783 E2F4Q16254 413 aa17.99■□□□□ 0.47
PHTF1-201ENST00000357783 GSDMAQ96QA5 445 aa17.99■□□□□ 0.47
PHTF1-201ENST00000357783 EYA3Q99504 573 aa17.99■□□□□ 0.47
PHTF1-201ENST00000357783 DDX60LQ5H9U9 1706 aaKnown RBP17.98■□□□□ 0.47
PHTF1-201ENST00000357783 FLT1P17948 1338 aa17.98■□□□□ 0.47
PHTF1-201ENST00000357783 CCDC194A0A1B0GVG4 234 aa17.98■□□□□ 0.47
PHTF1-201ENST00000357783 KIF2AO00139 706 aaPredicted RBP17.98■□□□□ 0.47
PHTF1-201ENST00000357783 CDC25AP30304 524 aa17.98■□□□□ 0.47
PHTF1-201ENST00000357783 TBC1D16Q8TBP0 767 aa17.98■□□□□ 0.47
PHTF1-201ENST00000357783 TMX1Q9H3N1 280 aa17.98■□□□□ 0.47
PHTF1-201ENST00000357783 SNED1Q8TER0 1413 aa17.98■□□□□ 0.47
PHTF1-201ENST00000357783 MYH1P12882 1939 aa17.98■□□□□ 0.47
PHTF1-201ENST00000357783 C6orf229H3BNL8 230 aa17.98■□□□□ 0.47
PHTF1-201ENST00000357783 DDR1Q08345 913 aa17.98■□□□□ 0.47
PHTF1-201ENST00000357783 CUL4BQ13620 913 aa17.98■□□□□ 0.47
PHTF1-201ENST00000357783 SPECC1LQ69YQ0 1117 aa17.98■□□□□ 0.47
PHTF1-201ENST00000357783 TBX2Q13207 712 aaPredicted RBP17.97■□□□□ 0.47
PHTF1-201ENST00000357783 PDXDC2PQ6P474 469 aa17.97■□□□□ 0.47
PHTF1-201ENST00000357783 C4orf32Q8N8J7 132 aa17.97■□□□□ 0.47
PHTF1-201ENST00000357783 ZNF287Q9HBT7 754 aa17.97■□□□□ 0.47
PHTF1-201ENST00000357783 PALM3A6NDB9 673 aaPredicted RBP17.97■□□□□ 0.47
PHTF1-201ENST00000357783 ONECUT3O60422 494 aaPredicted RBP17.97■□□□□ 0.47
PHTF1-201ENST00000357783 SPATA1Q5VX52 437 aa17.97■□□□□ 0.47
PHTF1-201ENST00000357783 SYT10Q6XYQ8 523 aa17.97■□□□□ 0.47
PHTF1-201ENST00000357783 C16orf86Q6ZW13 317 aa17.97■□□□□ 0.47
PHTF1-201ENST00000357783 PDCL2Q8N4E4 241 aa17.97■□□□□ 0.47
PHTF1-201ENST00000357783 PCDHA6Q9UN73 950 aa17.97■□□□□ 0.47
PHTF1-201ENST00000357783 PCDHA8Q9Y5H6 950 aa17.97■□□□□ 0.47
PHTF1-201ENST00000357783 PPP1R3GB7ZBB8 358 aa17.96■□□□□ 0.47
PHTF1-201ENST00000357783 STXBP3O00186 592 aa17.96■□□□□ 0.47
PHTF1-201ENST00000357783 COBLO75128 1261 aa17.96■□□□□ 0.47
PHTF1-201ENST00000357783 BBOX1O75936 387 aa17.96■□□□□ 0.47
PHTF1-201ENST00000357783 INF2Q27J81 1249 aa17.96■□□□□ 0.47
PHTF1-201ENST00000357783 HOMER1Q86YM7 354 aa17.96■□□□□ 0.47
PHTF1-201ENST00000357783 CCDC148Q8NFR7 591 aa17.96■□□□□ 0.47
PHTF1-201ENST00000357783 TRPC5Q9UL62 973 aaPredicted RBP17.96■□□□□ 0.47
PHTF1-201ENST00000357783 KLRF2D3W0D1 207 aa17.96■□□□□ 0.47
PHTF1-201ENST00000357783 M0R2N6 131 aa17.96■□□□□ 0.47
PHTF1-201ENST00000357783 PLCG2P16885 1265 aa17.96■□□□□ 0.47
PHTF1-201ENST00000357783 ADKP55263 362 aaKnown RBP17.96■□□□□ 0.47
PHTF1-201ENST00000357783 RHBDL3P58872 404 aa17.96■□□□□ 0.47
PHTF1-201ENST00000357783 ARL6IP4Q66PJ3 421 aaKnown RBP17.96■□□□□ 0.47
PHTF1-201ENST00000357783 CERS3Q8IU89 383 aa17.96■□□□□ 0.47
PHTF1-201ENST00000357783 MTRQ99707 1265 aa17.96■□□□□ 0.47
PHTF1-201ENST00000357783 BARHL2Q9NY43 387 aa17.96■□□□□ 0.47
PHTF1-201ENST00000357783 ZNF215Q9UL58 517 aaPredicted RBP17.96■□□□□ 0.47
PHTF1-201ENST00000357783 CTNND2Q9UQB3 1225 aa17.96■□□□□ 0.47
PHTF1-201ENST00000357783 TMEM139Q8IV31 216 aa17.95■□□□□ 0.46
PHTF1-201ENST00000357783 LONP1P36776 959 aaKnown RBP17.95■□□□□ 0.46
PHTF1-201ENST00000357783 TXLNAP40222 546 aa17.95■□□□□ 0.46
PHTF1-201ENST00000357783 NR1I3Q14994 352 aa17.95■□□□□ 0.46
PHTF1-201ENST00000357783 KARSQ15046 597 aaKnown RBP17.95■□□□□ 0.46
PHTF1-201ENST00000357783 CT47A1Q5JQC4 288 aaPredicted RBP17.95■□□□□ 0.46
PHTF1-201ENST00000357783 A0A1B0GTH6 734 aa17.94■□□□□ 0.46
PHTF1-201ENST00000357783 USP17L2Q6R6M4 530 aa17.94■□□□□ 0.46
PHTF1-201ENST00000357783 NEDD1Q8NHV4 660 aa17.94■□□□□ 0.46
PHTF1-201ENST00000357783 BAG1Q99933 345 aaPredicted RBP17.94■□□□□ 0.46
PHTF1-201ENST00000357783 PYM1Q9BRP8 204 aaKnown RBP17.94■□□□□ 0.46
PHTF1-201ENST00000357783 TMEM60Q9H2L4 133 aa17.94■□□□□ 0.46
PHTF1-201ENST00000357783 PODXL2Q9NZ53 605 aa17.94■□□□□ 0.46
PHTF1-201ENST00000357783 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.94■□□□□ 0.46
PHTF1-201ENST00000357783 V9GYY5 206 aaPredicted RBP17.94■□□□□ 0.46
PHTF1-201ENST00000357783 PP2D1A8MPX8 630 aa17.94■□□□□ 0.46
PHTF1-201ENST00000357783 POLRMTO00411 1230 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms