RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 PDRG1Q9NUG6 133 aa18.19■□□□□ 0.5
TRIM13-201ENST00000356017 PDHBP11177 359 aa18.18■□□□□ 0.5
TRIM13-201ENST00000356017 FAM83BQ5T0W9 1011 aa18.18■□□□□ 0.5
TRIM13-201ENST00000356017 GPATCH4Q5T3I0 446 aaKnown RBP18.18■□□□□ 0.5
TRIM13-201ENST00000356017 PARK7Q99497 189 aaKnown RBP18.18■□□□□ 0.5
TRIM13-201ENST00000356017 AGXT2Q9BYV1 514 aa18.18■□□□□ 0.5
TRIM13-201ENST00000356017 MTMR7Q9Y216 660 aa18.18■□□□□ 0.5
TRIM13-201ENST00000356017 SLC12A7Q9Y666 1083 aa18.18■□□□□ 0.5
TRIM13-201ENST00000356017 PTPRFP10586 1907 aa18.17■□□□□ 0.5
TRIM13-201ENST00000356017 CA12O43570 354 aa18.17■□□□□ 0.5
TRIM13-201ENST00000356017 DDAH1O94760 285 aa18.17■□□□□ 0.5
TRIM13-201ENST00000356017 CALM1P0DP23 149 aa18.17■□□□□ 0.5
TRIM13-201ENST00000356017 CALM2P0DP24 149 aa18.17■□□□□ 0.5
TRIM13-201ENST00000356017 CALM3P0DP25 149 aa18.17■□□□□ 0.5
TRIM13-201ENST00000356017 SNHG28P0DPA3 235 aa18.17■□□□□ 0.5
TRIM13-201ENST00000356017 COG2Q14746 738 aa18.17■□□□□ 0.5
TRIM13-201ENST00000356017 TAF1CQ15572 869 aaPredicted RBP18.17■□□□□ 0.5
TRIM13-201ENST00000356017 JMYQ8N9B5 988 aa18.17■□□□□ 0.5
TRIM13-201ENST00000356017 ALDH8A1Q9H2A2 487 aaPredicted RBP18.17■□□□□ 0.5
TRIM13-201ENST00000356017 SENP2Q9HC62 589 aa18.17■□□□□ 0.5
TRIM13-201ENST00000356017 GPHNQ9NQX3 736 aaPredicted RBP18.17■□□□□ 0.5
TRIM13-201ENST00000356017 HOXC10Q9NYD6 342 aa18.17■□□□□ 0.5
TRIM13-201ENST00000356017 LOC285556D6RIA3 1793 aa18.17■□□□□ 0.5
TRIM13-201ENST00000356017 MYH4Q9Y623 1939 aa18.17■□□□□ 0.5
TRIM13-201ENST00000356017 FLOT1O75955 427 aa18.16■□□□□ 0.5
TRIM13-201ENST00000356017 NEK4P51957 841 aa18.16■□□□□ 0.5
TRIM13-201ENST00000356017 TROAPQ12815 778 aa18.16■□□□□ 0.5
TRIM13-201ENST00000356017 ANKRD1Q15327 319 aa18.16■□□□□ 0.5
TRIM13-201ENST00000356017 ZNF654Q8IZM8 581 aa18.16■□□□□ 0.5
TRIM13-201ENST00000356017 CHURC1Q8WUH1 139 aa18.16■□□□□ 0.5
TRIM13-201ENST00000356017 BRF1Q92994 677 aa18.16■□□□□ 0.5
TRIM13-201ENST00000356017 MAP3K14Q99558 947 aa18.16■□□□□ 0.5
TRIM13-201ENST00000356017 KIF2CQ99661 725 aa18.16■□□□□ 0.5
TRIM13-201ENST00000356017 ASCC2Q9H1I8 757 aaPredicted RBP18.16■□□□□ 0.5
TRIM13-201ENST00000356017 ZFYVE28Q9HCC9 887 aa18.16■□□□□ 0.5
TRIM13-201ENST00000356017 SAGE1Q9NXZ1 904 aa18.16■□□□□ 0.5
TRIM13-201ENST00000356017 FEM1BQ9UK73 627 aa18.16■□□□□ 0.5
TRIM13-201ENST00000356017 ISY1Q9ULR0 285 aaKnown RBP18.16■□□□□ 0.5
TRIM13-201ENST00000356017 PLA2G6O60733 806 aa18.16■□□□□ 0.5
TRIM13-201ENST00000356017 STAT2P52630 851 aa18.16■□□□□ 0.5
TRIM13-201ENST00000356017 RABEP1Q15276 862 aa18.16■□□□□ 0.5
TRIM13-201ENST00000356017 CCDC96Q2M329 555 aa18.16■□□□□ 0.5
TRIM13-201ENST00000356017 ASPRV1Q53RT3 343 aa18.16■□□□□ 0.5
TRIM13-201ENST00000356017 SMCR8Q8TEV9 937 aaPredicted RBP18.16■□□□□ 0.5
TRIM13-201ENST00000356017 GTF3C2Q8WUA4 911 aaPredicted RBP18.16■□□□□ 0.5
TRIM13-201ENST00000356017 NUP88Q99567 741 aaPredicted RBP18.16■□□□□ 0.5
TRIM13-201ENST00000356017 CFHR5Q9BXR6 569 aa18.16■□□□□ 0.5
TRIM13-201ENST00000356017 RNF186Q9NXI6 227 aa18.16■□□□□ 0.5
TRIM13-201ENST00000356017 MYPNQ86TC9 1320 aa18.15■□□□□ 0.5
TRIM13-201ENST00000356017 TMEM232C9JQI7 657 aa18.15■□□□□ 0.5
TRIM13-201ENST00000356017 PARP1P09874 1014 aaKnown RBP18.15■□□□□ 0.5
TRIM13-201ENST00000356017 KIF5BP33176 963 aa18.15■□□□□ 0.5
TRIM13-201ENST00000356017 RCAN1P53805 252 aa18.15■□□□□ 0.5
TRIM13-201ENST00000356017 ZNF543Q08ER8 600 aa18.15■□□□□ 0.5
TRIM13-201ENST00000356017 APOA5Q6Q788 366 aa18.15■□□□□ 0.5
TRIM13-201ENST00000356017 KCTD1Q719H9 257 aa18.15■□□□□ 0.5
TRIM13-201ENST00000356017 FAM160B2Q86V87 743 aa18.15■□□□□ 0.5
TRIM13-201ENST00000356017 PRPF38AQ8NAV1 312 aaKnown RBP18.15■□□□□ 0.5
TRIM13-201ENST00000356017 CTCFLQ8NI51 663 aaPredicted RBP18.15■□□□□ 0.5
TRIM13-201ENST00000356017 WBP1LQ9NX94 342 aa18.15■□□□□ 0.5
TRIM13-201ENST00000356017 KLF18A0A0U1RQI7 1052 aa18.14■□□□□ 0.49
TRIM13-201ENST00000356017 TRPA1O75762 1119 aa18.14■□□□□ 0.49
TRIM13-201ENST00000356017 CYP2C8P10632 490 aa18.14■□□□□ 0.49
TRIM13-201ENST00000356017 EVCP57679 992 aa18.14■□□□□ 0.49
TRIM13-201ENST00000356017 IKQ13123 557 aaPredicted RBP18.14■□□□□ 0.49
TRIM13-201ENST00000356017 NUP133Q8WUM0 1156 aa18.14■□□□□ 0.49
TRIM13-201ENST00000356017 P2RX7Q99572 595 aaKnown RBP18.14■□□□□ 0.49
TRIM13-201ENST00000356017 ZBTB43O43298 467 aa18.13■□□□□ 0.49
TRIM13-201ENST00000356017 TLR2O60603 784 aa18.13■□□□□ 0.49
TRIM13-201ENST00000356017 DSG3P32926 999 aa18.13■□□□□ 0.49
TRIM13-201ENST00000356017 GCLCP48506 637 aaPredicted RBP18.13■□□□□ 0.49
TRIM13-201ENST00000356017 HERVK_113P62684 666 aa18.13■□□□□ 0.49
TRIM13-201ENST00000356017 TOB2Q14106 344 aaPredicted RBP18.13■□□□□ 0.49
TRIM13-201ENST00000356017 PPP2R5BQ15173 497 aa18.13■□□□□ 0.49
TRIM13-201ENST00000356017 LBX2Q6XYB7 198 aa18.13■□□□□ 0.49
TRIM13-201ENST00000356017 CHMP4CQ96CF2 233 aa18.13■□□□□ 0.49
TRIM13-201ENST00000356017 SLF1Q9BQI6 1058 aa18.13■□□□□ 0.49
TRIM13-201ENST00000356017 BRPF3Q9ULD4 1205 aa18.13■□□□□ 0.49
TRIM13-201ENST00000356017 PPP1R9AQ9ULJ8 1098 aa18.13■□□□□ 0.49
TRIM13-201ENST00000356017 FRMPD2Q68DX3 1309 aaPredicted RBP18.13■□□□□ 0.49
TRIM13-201ENST00000356017 FDX1P10109 184 aa18.12■□□□□ 0.49
TRIM13-201ENST00000356017 APOBRQ0VD83 1088 aa18.12■□□□□ 0.49
TRIM13-201ENST00000356017 CRHR2Q13324 411 aa18.12■□□□□ 0.49
TRIM13-201ENST00000356017 GRM4Q14833 912 aa18.12■□□□□ 0.49
TRIM13-201ENST00000356017 BTNL9Q6UXG8 535 aa18.12■□□□□ 0.49
TRIM13-201ENST00000356017 MB21D1Q8N884 522 aa18.12■□□□□ 0.49
TRIM13-201ENST00000356017 GPCPD1Q9NPB8 672 aa18.12■□□□□ 0.49
TRIM13-201ENST00000356017 PALM3A6NDB9 673 aaPredicted RBP18.12■□□□□ 0.49
TRIM13-201ENST00000356017 SPDYE16A6NNV3 312 aaPredicted RBP18.12■□□□□ 0.49
TRIM13-201ENST00000356017 GNAQP50148 359 aa18.12■□□□□ 0.49
TRIM13-201ENST00000356017 RASGRP2Q7LDG7 609 aa18.12■□□□□ 0.49
TRIM13-201ENST00000356017 MICU3Q86XE3 530 aa18.12■□□□□ 0.49
TRIM13-201ENST00000356017 FANCBQ8NB91 859 aa18.12■□□□□ 0.49
TRIM13-201ENST00000356017 MYL10Q9BUA6 226 aa18.12■□□□□ 0.49
TRIM13-201ENST00000356017 FBXO28Q9NVF7 368 aa18.12■□□□□ 0.49
TRIM13-201ENST00000356017 MAD2L2Q9UI95 211 aa18.12■□□□□ 0.49
TRIM13-201ENST00000356017 NAP1L2Q9ULW6 460 aaPredicted RBP18.12■□□□□ 0.49
TRIM13-201ENST00000356017 CEP350Q5VT06 3117 aa18.11■□□□□ 0.49
TRIM13-201ENST00000356017 CCDC196A0A1B0GTZ2 297 aa18.11■□□□□ 0.49
TRIM13-201ENST00000356017 KLRF2D3W0D1 207 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms