RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 LDHBP07195 334 aaKnown RBP18.85■□□□□ 0.61
PDAP1-201ENST00000350498 GNG11P61952 73 aa18.85■□□□□ 0.61
PDAP1-201ENST00000350498 BAG1Q99933 345 aaPredicted RBP18.85■□□□□ 0.61
PDAP1-201ENST00000350498 XDHP47989 1333 aa18.85■□□□□ 0.61
PDAP1-201ENST00000350498 PNMA6AP0CW24 399 aaPredicted RBP18.85■□□□□ 0.61
PDAP1-201ENST00000350498 GPSM2P81274 684 aa18.85■□□□□ 0.61
PDAP1-201ENST00000350498 PNMA1Q8ND90 353 aa18.85■□□□□ 0.61
PDAP1-201ENST00000350498 MNS1Q8NEH6 495 aa18.85■□□□□ 0.61
PDAP1-201ENST00000350498 CPLX3Q8WVH0 158 aa18.85■□□□□ 0.61
PDAP1-201ENST00000350498 ARPP21Q9UBL0 812 aaPredicted RBP18.85■□□□□ 0.61
PDAP1-201ENST00000350498 PHLPP2Q6ZVD8 1323 aa18.85■□□□□ 0.61
PDAP1-201ENST00000350498 UBAP1LF5GYI3 381 aa18.84■□□□□ 0.61
PDAP1-201ENST00000350498 PLA2G4AP47712 749 aa18.84■□□□□ 0.61
PDAP1-201ENST00000350498 PFKFB3Q16875 520 aaPredicted RBP18.84■□□□□ 0.61
PDAP1-201ENST00000350498 SH3RF1Q7Z6J0 888 aa18.84■□□□□ 0.61
PDAP1-201ENST00000350498 ZSWIM4Q9H7M6 989 aa18.84■□□□□ 0.61
PDAP1-201ENST00000350498 STX8Q9UNK0 236 aa18.84■□□□□ 0.61
PDAP1-201ENST00000350498 DLEC1Q9Y238 1755 aa18.84■□□□□ 0.61
PDAP1-201ENST00000350498 TADA3O75528 432 aa18.84■□□□□ 0.61
PDAP1-201ENST00000350498 TBX2Q13207 712 aaPredicted RBP18.84■□□□□ 0.61
PDAP1-201ENST00000350498 CUL4BQ13620 913 aa18.84■□□□□ 0.61
PDAP1-201ENST00000350498 PPP2R5BQ15173 497 aa18.84■□□□□ 0.61
PDAP1-201ENST00000350498 TRAPPC3LQ5T215 181 aa18.84■□□□□ 0.61
PDAP1-201ENST00000350498 MLKLQ8NB16 471 aa18.84■□□□□ 0.61
PDAP1-201ENST00000350498 ENOX1Q8TC92 643 aaKnown RBP18.84■□□□□ 0.61
PDAP1-201ENST00000350498 KAT14Q9H8E8 782 aa18.84■□□□□ 0.61
PDAP1-201ENST00000350498 CALM1P0DP23 149 aa18.83■□□□□ 0.61
PDAP1-201ENST00000350498 CALM2P0DP24 149 aa18.83■□□□□ 0.61
PDAP1-201ENST00000350498 CALM3P0DP25 149 aa18.83■□□□□ 0.61
PDAP1-201ENST00000350498 ATP2C1P98194 919 aaPredicted RBP18.83■□□□□ 0.61
PDAP1-201ENST00000350498 SBK1Q52WX2 424 aa18.83■□□□□ 0.61
PDAP1-201ENST00000350498 MKNK2Q9HBH9 465 aa18.83■□□□□ 0.61
PDAP1-201ENST00000350498 HOOK1Q9UJC3 728 aaKnown RBP18.83■□□□□ 0.61
PDAP1-201ENST00000350498 SOWAHDA6NJG2 315 aa18.83■□□□□ 0.6
PDAP1-201ENST00000350498 TOM1O60784 492 aa18.83■□□□□ 0.6
PDAP1-201ENST00000350498 APTXQ7Z2E3 356 aaKnown RBP18.83■□□□□ 0.6
PDAP1-201ENST00000350498 MRPL44Q9H9J2 332 aaKnown RBP18.83■□□□□ 0.6
PDAP1-201ENST00000350498 MAD2L2Q9UI95 211 aa18.83■□□□□ 0.6
PDAP1-201ENST00000350498 SBF2Q86WG5 1849 aa18.83■□□□□ 0.6
PDAP1-201ENST00000350498 PPP1R3GB7ZBB8 358 aa18.82■□□□□ 0.6
PDAP1-201ENST00000350498 TFRCP02786 760 aaKnown RBP18.82■□□□□ 0.6
PDAP1-201ENST00000350498 CREBRFQ8IUR6 639 aa18.82■□□□□ 0.6
PDAP1-201ENST00000350498 CCDC88AQ3V6T2 1871 aa18.82■□□□□ 0.6
PDAP1-201ENST00000350498 POLR3GO15318 223 aaPredicted RBP18.82■□□□□ 0.6
PDAP1-201ENST00000350498 ARHGAP6O43182 974 aa18.82■□□□□ 0.6
PDAP1-201ENST00000350498 GRAPQ13588 217 aa18.82■□□□□ 0.6
PDAP1-201ENST00000350498 E2F4Q16254 413 aa18.82■□□□□ 0.6
PDAP1-201ENST00000350498 PRR5LQ6MZQ0 368 aa18.82■□□□□ 0.6
PDAP1-201ENST00000350498 CNBD1Q8NA66 436 aa18.82■□□□□ 0.6
PDAP1-201ENST00000350498 GRAPLQ8TC17 118 aaPredicted RBP18.82■□□□□ 0.6
PDAP1-201ENST00000350498 TMEM60Q9H2L4 133 aa18.82■□□□□ 0.6
PDAP1-201ENST00000350498 BRMS1Q9HCU9 246 aa18.82■□□□□ 0.6
PDAP1-201ENST00000350498 SASH3O75995 380 aa18.81■□□□□ 0.6
PDAP1-201ENST00000350498 SLURP2P0DP57 97 aa18.81■□□□□ 0.6
PDAP1-201ENST00000350498 SPECC1LQ69YQ0 1117 aa18.81■□□□□ 0.6
PDAP1-201ENST00000350498 ELOA2Q8IYF1 753 aaPredicted RBP18.81■□□□□ 0.6
PDAP1-201ENST00000350498 ZCCHC17Q9NP64 241 aaKnown RBP18.81■□□□□ 0.6
PDAP1-201ENST00000350498 COL24A1Q17RW2 1714 aa18.81■□□□□ 0.6
PDAP1-201ENST00000350498 LAMB1P07942 1786 aa18.81■□□□□ 0.6
PDAP1-201ENST00000350498 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.81■□□□□ 0.6
PDAP1-201ENST00000350498 TSPY3P0CV98 308 aa18.81■□□□□ 0.6
PDAP1-201ENST00000350498 TSPY8P0CW00 308 aa18.81■□□□□ 0.6
PDAP1-201ENST00000350498 BMS1Q14692 1282 aaKnown RBP18.81■□□□□ 0.6
PDAP1-201ENST00000350498 NR1I3Q14994 352 aa18.81■□□□□ 0.6
PDAP1-201ENST00000350498 TEX35Q5T0J7 233 aa18.81■□□□□ 0.6
PDAP1-201ENST00000350498 WWC2Q6AWC2 1192 aa18.81■□□□□ 0.6
PDAP1-201ENST00000350498 LRRC15Q8TF66 581 aa18.81■□□□□ 0.6
PDAP1-201ENST00000350498 LZTFL1Q9NQ48 299 aa18.81■□□□□ 0.6
PDAP1-201ENST00000350498 CTNND2Q9UQB3 1225 aa18.81■□□□□ 0.6
PDAP1-201ENST00000350498 ZRANB2O95218 330 aaKnown RBP eCLIP18.8■□□□□ 0.6
PDAP1-201ENST00000350498 C4orf32Q8N8J7 132 aa18.8■□□□□ 0.6
PDAP1-201ENST00000350498 CCT6AP40227 531 aaKnown RBP18.8■□□□□ 0.6
PDAP1-201ENST00000350498 INF2Q27J81 1249 aa18.8■□□□□ 0.6
PDAP1-201ENST00000350498 HEATR3Q7Z4Q2 680 aa18.8■□□□□ 0.6
PDAP1-201ENST00000350498 BLIDQ8IZY5 108 aa18.8■□□□□ 0.6
PDAP1-201ENST00000350498 EEF2KMTQ96G04 330 aa18.8■□□□□ 0.6
PDAP1-201ENST00000350498 CCDC34Q96HJ3 373 aa18.8■□□□□ 0.6
PDAP1-201ENST00000350498 TMEM47Q9BQJ4 181 aa18.8■□□□□ 0.6
PDAP1-201ENST00000350498 VAT1LQ9HCJ6 419 aa18.8■□□□□ 0.6
PDAP1-201ENST00000350498 GDAQ9Y2T3 454 aa18.8■□□□□ 0.6
PDAP1-201ENST00000350498 ZBTB22O15209 634 aa18.79■□□□□ 0.6
PDAP1-201ENST00000350498 UFL1O94874 794 aa18.79■□□□□ 0.6
PDAP1-201ENST00000350498 PCP11498 1178 aaKnown RBP18.79■□□□□ 0.6
PDAP1-201ENST00000350498 CASQ1P31415 396 aa18.79■□□□□ 0.6
PDAP1-201ENST00000350498 BTDP43251 543 aa18.79■□□□□ 0.6
PDAP1-201ENST00000350498 PDXDC2PQ6P474 469 aa18.79■□□□□ 0.6
PDAP1-201ENST00000350498 FNBP4Q8N3X1 1017 aaPredicted RBP18.79■□□□□ 0.6
PDAP1-201ENST00000350498 FERMT2Q96AC1 680 aa18.79■□□□□ 0.6
PDAP1-201ENST00000350498 SYNRGQ9UMZ2 1314 aa18.79■□□□□ 0.6
PDAP1-201ENST00000350498 ZSCAN12O43309 604 aa18.79■□□□□ 0.6
PDAP1-201ENST00000350498 ABL1P00519 1130 aa18.79■□□□□ 0.6
PDAP1-201ENST00000350498 RASA1P20936 1047 aa18.79■□□□□ 0.6
PDAP1-201ENST00000350498 KANK3Q6NY19 840 aa18.79■□□□□ 0.6
PDAP1-201ENST00000350498 USP17L2Q6R6M4 530 aa18.79■□□□□ 0.6
PDAP1-201ENST00000350498 TMCO3Q6UWJ1 677 aa18.79■□□□□ 0.6
PDAP1-201ENST00000350498 CLEC10AQ8IUN9 316 aa18.79■□□□□ 0.6
PDAP1-201ENST00000350498 KIFC2Q96AC6 838 aa18.79■□□□□ 0.6
PDAP1-201ENST00000350498 RTFDC1Q9BY42 306 aaPredicted RBP18.79■□□□□ 0.6
PDAP1-201ENST00000350498 PDS5AQ29RF7 1337 aaKnown RBP18.78■□□□□ 0.6
PDAP1-201ENST00000350498 NOL10Q9BSC4 688 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms