RNA–Protein interactions for RNA: ENST00000350199.8

RNF38-202, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 5,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-202ENST00000350199 TTLL1O95922 423 aa21.71■■□□□ 1.07
RNF38-202ENST00000350199 TRAPPC10P48553 1259 aa21.71■■□□□ 1.07
RNF38-202ENST00000350199 CD209Q9NNX6 404 aa21.71■■□□□ 1.07
RNF38-202ENST00000350199 DNM3Q9UQ16 869 aa21.71■■□□□ 1.07
RNF38-202ENST00000350199 PLEKHG2Q9H7P9 1386 aa21.71■■□□□ 1.07
RNF38-202ENST00000350199 TNFAIP1Q13829 316 aa21.71■■□□□ 1.07
RNF38-202ENST00000350199 DESP17661 470 aa21.71■■□□□ 1.07
RNF38-202ENST00000350199 IFI16Q16666 785 aaKnown RBP21.71■■□□□ 1.07
RNF38-202ENST00000350199 ASPRV1Q53RT3 343 aa21.71■■□□□ 1.07
RNF38-202ENST00000350199 DCAF17Q5H9S7 520 aaPredicted RBP21.71■■□□□ 1.07
RNF38-202ENST00000350199 MASTLQ96GX5 879 aa21.71■■□□□ 1.07
RNF38-202ENST00000350199 TRIM14Q14142 442 aa21.71■■□□□ 1.07
RNF38-202ENST00000350199 RC3H1Q5TC82 1133 aaKnown RBP21.71■■□□□ 1.07
RNF38-202ENST00000350199 HOOK2Q96ED9 719 aa21.71■■□□□ 1.07
RNF38-202ENST00000350199 HOMER2Q9NSB8 354 aa21.71■■□□□ 1.07
RNF38-202ENST00000350199 PCDHA5Q9Y5H7 936 aa21.71■■□□□ 1.07
RNF38-202ENST00000350199 TACC1O75410 805 aa21.7■■□□□ 1.06
RNF38-202ENST00000350199 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.7■■□□□ 1.06
RNF38-202ENST00000350199 V9GYY5 206 aaPredicted RBP21.7■■□□□ 1.06
RNF38-202ENST00000350199 CBX1P83916 185 aa21.7■■□□□ 1.06
RNF38-202ENST00000350199 RAD51AP2Q09MP3 1159 aa21.7■■□□□ 1.06
RNF38-202ENST00000350199 TRIML1Q8N9V2 468 aa21.7■■□□□ 1.06
RNF38-202ENST00000350199 GPATCH4Q5T3I0 446 aaKnown RBP21.7■■□□□ 1.06
RNF38-202ENST00000350199 SRRTQ9BXP5 876 aaKnown RBP21.7■■□□□ 1.06
RNF38-202ENST00000350199 CWC15Q9P013 229 aaKnown RBP21.7■■□□□ 1.06
RNF38-202ENST00000350199 STK24Q9Y6E0 443 aa21.7■■□□□ 1.06
RNF38-202ENST00000350199 CTAGE15A4D2H0 777 aa21.7■■□□□ 1.06
RNF38-202ENST00000350199 CTAGE8P0CG41 777 aa21.7■■□□□ 1.06
RNF38-202ENST00000350199 SF3B3Q15393 1217 aaKnown RBP21.7■■□□□ 1.06
RNF38-202ENST00000350199 ZNF569Q5MCW4 686 aa21.7■■□□□ 1.06
RNF38-202ENST00000350199 CTAGE6Q86UF2 777 aa21.7■■□□□ 1.06
RNF38-202ENST00000350199 CTAGE4Q8IX94 777 aa21.7■■□□□ 1.06
RNF38-202ENST00000350199 LONP1P36776 959 aaKnown RBP21.69■■□□□ 1.06
RNF38-202ENST00000350199 CDK8P49336 464 aa21.69■■□□□ 1.06
RNF38-202ENST00000350199 PRPF4BQ13523 1007 aaKnown RBP21.69■■□□□ 1.06
RNF38-202ENST00000350199 NAA15Q9BXJ9 866 aaKnown RBP21.69■■□□□ 1.06
RNF38-202ENST00000350199 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.69■■□□□ 1.062e-7■■■■■ 106.2
RNF38-202ENST00000350199 SPATA31A6Q5VVP1 1343 aa21.69■■□□□ 1.06
RNF38-202ENST00000350199 CLRN2A0PK11 232 aa21.69■■□□□ 1.06
RNF38-202ENST00000350199 PLEKHA8P1O95397 391 aa21.69■■□□□ 1.06
RNF38-202ENST00000350199 NTSR2O95665 410 aa21.69■■□□□ 1.06
RNF38-202ENST00000350199 MYCLP12524 364 aaPredicted RBP21.69■■□□□ 1.06
RNF38-202ENST00000350199 PRKG1Q13976 671 aa21.69■■□□□ 1.06
RNF38-202ENST00000350199 TMED8Q6PL24 325 aaPredicted RBP21.69■■□□□ 1.06
RNF38-202ENST00000350199 NSMFQ6X4W1 530 aa21.69■■□□□ 1.06
RNF38-202ENST00000350199 CSRNP1Q96S65 589 aa21.69■■□□□ 1.06
RNF38-202ENST00000350199 DCP1AQ9NPI6 582 aaPredicted RBP21.69■■□□□ 1.06
RNF38-202ENST00000350199 ZBED4O75132 1171 aa21.69■■□□□ 1.06
RNF38-202ENST00000350199 LY9Q9HBG7 655 aa21.69■■□□□ 1.06
RNF38-202ENST00000350199 TBC1D7Q9P0N9 293 aa21.69■■□□□ 1.06
RNF38-202ENST00000350199 PCDHA1Q9Y5I3 950 aa21.69■■□□□ 1.06
RNF38-202ENST00000350199 TMEM232C9JQI7 657 aa21.69■■□□□ 1.06
RNF38-202ENST00000350199 FBXO11Q86XK2 927 aa21.69■■□□□ 1.06
RNF38-202ENST00000350199 NT5C3AQ9H0P0 336 aa21.69■■□□□ 1.06
RNF38-202ENST00000350199 RNF216Q9NWF9 866 aaPredicted RBP21.69■■□□□ 1.06
RNF38-202ENST00000350199 DDX39AO00148 427 aaKnown RBP21.68■■□□□ 1.06
RNF38-202ENST00000350199 USP17L2Q6R6M4 530 aa21.68■■□□□ 1.06
RNF38-202ENST00000350199 DGKHQ86XP1 1220 aa21.68■■□□□ 1.06
RNF38-202ENST00000350199 SHPRHQ149N8 1683 aa21.68■■□□□ 1.06
RNF38-202ENST00000350199 PUF60Q9UHX1 559 aaKnown RBP21.68■■□□□ 1.06
RNF38-202ENST00000350199 PCDHA12Q9UN75 941 aa21.68■■□□□ 1.06
RNF38-202ENST00000350199 CKAP4Q07065 602 aaKnown RBP21.68■■□□□ 1.06
RNF38-202ENST00000350199 TXNRD1Q16881 649 aa21.68■■□□□ 1.06
RNF38-202ENST00000350199 TIGD1Q96MW7 591 aa21.68■■□□□ 1.06
RNF38-202ENST00000350199 CLEC17AQ6ZS10 378 aa21.67■■□□□ 1.06
RNF38-202ENST00000350199 TCHPQ9BT92 498 aa21.67■■□□□ 1.06
RNF38-202ENST00000350199 ARHGEF35A5YM69 484 aa21.67■■□□□ 1.06
RNF38-202ENST00000350199 CETN3O15182 167 aa21.67■■□□□ 1.06
RNF38-202ENST00000350199 GTPBP6O43824 516 aaPredicted RBP21.67■■□□□ 1.06
RNF38-202ENST00000350199 CC2D2BQ6DHV5 1058 aa21.67■■□□□ 1.06
RNF38-202ENST00000350199 PAXIP1Q6ZW49 1069 aaPredicted RBP21.67■■□□□ 1.06
RNF38-202ENST00000350199 PIGSQ96S52 555 aa21.67■■□□□ 1.06
RNF38-202ENST00000350199 FANCLQ9NW38 375 aa21.67■■□□□ 1.06
RNF38-202ENST00000350199 H7C1D1 291 aa21.67■■□□□ 1.06
RNF38-202ENST00000350199 EPB41P11171 864 aaKnown RBP21.67■■□□□ 1.06
RNF38-202ENST00000350199 PRR16Q569H4 304 aa21.67■■□□□ 1.06
RNF38-202ENST00000350199 A0A087WWV3 80 aa21.67■■□□□ 1.06
RNF38-202ENST00000350199 EXOSC10Q01780 885 aaKnown RBP21.67■■□□□ 1.06
RNF38-202ENST00000350199 SPECC1LQ69YQ0 1117 aa21.67■■□□□ 1.06
RNF38-202ENST00000350199 TDRD7Q8NHU6 1098 aaKnown RBP21.67■■□□□ 1.06
RNF38-202ENST00000350199 ZNF512BQ96KM6 892 aaPredicted RBP21.67■■□□□ 1.06
RNF38-202ENST00000350199 PCDHB6Q9Y5E3 794 aa21.67■■□□□ 1.06
RNF38-202ENST00000350199 PNPLA7Q6ZV29 1317 aa21.67■■□□□ 1.06
RNF38-202ENST00000350199 KCTD1Q719H9 257 aa21.66■■□□□ 1.06
RNF38-202ENST00000350199 DPCR1Q3MIW9 517 aa21.66■■□□□ 1.06
RNF38-202ENST00000350199 MRFAP1L1Q96HT8 127 aa21.66■■□□□ 1.06
RNF38-202ENST00000350199 DDX25Q9UHL0 483 aaKnown RBP21.66■■□□□ 1.06
RNF38-202ENST00000350199 DHX36Q9H2U1 1008 aaKnown RBP21.66■■□□□ 1.06
RNF38-202ENST00000350199 FRMD4BQ9Y2L6 1034 aa21.66■■□□□ 1.06
RNF38-202ENST00000350199 GPSM2P81274 684 aa21.66■■□□□ 1.06
RNF38-202ENST00000350199 SETQ01105 290 aaPredicted RBP21.66■■□□□ 1.06
RNF38-202ENST00000350199 MCTP2Q6DN12 878 aa21.66■■□□□ 1.06
RNF38-202ENST00000350199 C11orf57Q6ZUT1 292 aaPredicted RBP21.66■■□□□ 1.06
RNF38-202ENST00000350199 ENAHQ8N8S7 591 aaPredicted RBP21.66■■□□□ 1.06
RNF38-202ENST00000350199 KANSL2Q9H9L4 492 aa21.66■■□□□ 1.06
RNF38-202ENST00000350199 MYCNP04198 464 aaPredicted RBP21.65■■□□□ 1.06
RNF38-202ENST00000350199 TAF3Q5VWG9 929 aa21.65■■□□□ 1.06
RNF38-202ENST00000350199 CTR9Q6PD62 1173 aa21.65■■□□□ 1.06
RNF38-202ENST00000350199 CCDC66A2RUB6 948 aa21.65■■□□□ 1.06
RNF38-202ENST00000350199 ARHGAP6O43182 974 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms