RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 COA7Q96BR5 231 aa13.38□□□□□ -0.27
CDH5-201ENST00000341529 POTEB2H3BUK9 544 aa13.37□□□□□ -0.27
CDH5-201ENST00000341529 MECOMQ03112 1051 aa13.37□□□□□ -0.27
CDH5-201ENST00000341529 USP49Q70CQ1 688 aa13.37□□□□□ -0.27
CDH5-201ENST00000341529 KRT13P13646 458 aa13.37□□□□□ -0.27
CDH5-201ENST00000341529 C10orf67Q8IYJ2 551 aa13.37□□□□□ -0.27
CDH5-201ENST00000341529 FMR1NBQ8N0W7 255 aaPredicted RBP13.37□□□□□ -0.27
CDH5-201ENST00000341529 SCLT1Q96NL6 688 aa13.37□□□□□ -0.27
CDH5-201ENST00000341529 KCNF1Q9H3M0 494 aa13.37□□□□□ -0.27
CDH5-201ENST00000341529 PARP3Q9Y6F1 533 aa13.37□□□□□ -0.27
CDH5-201ENST00000341529 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.37□□□□□ -0.27
CDH5-201ENST00000341529 ADCY7P51828 1080 aa13.37□□□□□ -0.27
CDH5-201ENST00000341529 CACNB3P54284 484 aa13.37□□□□□ -0.27
CDH5-201ENST00000341529 PRKG1Q13976 671 aa13.37□□□□□ -0.27
CDH5-201ENST00000341529 NAA15Q9BXJ9 866 aaKnown RBP13.37□□□□□ -0.27
CDH5-201ENST00000341529 PCDHB13Q9Y5F0 798 aa13.37□□□□□ -0.27
CDH5-201ENST00000341529 PRR29P0C7W0 189 aa13.37□□□□□ -0.27
CDH5-201ENST00000341529 HARSP12081 509 aaKnown RBP13.37□□□□□ -0.27
CDH5-201ENST00000341529 CKAP4Q07065 602 aaKnown RBP13.37□□□□□ -0.27
CDH5-201ENST00000341529 RBL2Q08999 1139 aa13.37□□□□□ -0.27
CDH5-201ENST00000341529 UBE4AQ14139 1066 aa13.37□□□□□ -0.27
CDH5-201ENST00000341529 TTLL12Q14166 644 aaPredicted RBP13.37□□□□□ -0.27
CDH5-201ENST00000341529 ISCA1Q9BUE6 129 aa13.37□□□□□ -0.27
CDH5-201ENST00000341529 GDAQ9Y2T3 454 aa13.37□□□□□ -0.27
CDH5-201ENST00000341529 UBXN2AP68543 259 aa13.36□□□□□ -0.27
CDH5-201ENST00000341529 CETN1Q12798 172 aa13.36□□□□□ -0.27
CDH5-201ENST00000341529 RABL6Q3YEC7 729 aaPredicted RBP13.36□□□□□ -0.27
CDH5-201ENST00000341529 TIGD1Q96MW7 591 aa13.36□□□□□ -0.27
CDH5-201ENST00000341529 PLCD4Q9BRC7 762 aa13.36□□□□□ -0.27
CDH5-201ENST00000341529 ARPP21Q9UBL0 812 aaPredicted RBP13.36□□□□□ -0.27
CDH5-201ENST00000341529 DIP2BQ9P265 1576 aa13.36□□□□□ -0.27
CDH5-201ENST00000341529 FAM196BA6NMK8 535 aa13.36□□□□□ -0.27
CDH5-201ENST00000341529 BUB1O43683 1085 aa13.36□□□□□ -0.27
CDH5-201ENST00000341529 SORBS3O60504 671 aa13.36□□□□□ -0.27
CDH5-201ENST00000341529 MYCNP04198 464 aaPredicted RBP13.36□□□□□ -0.27
CDH5-201ENST00000341529 OAS2P29728 719 aaKnown RBP13.36□□□□□ -0.27
CDH5-201ENST00000341529 RDXP35241 583 aaKnown RBP13.36□□□□□ -0.27
CDH5-201ENST00000341529 RFX5P48382 616 aaPredicted RBP13.36□□□□□ -0.27
CDH5-201ENST00000341529 LLGL1Q15334 1064 aa13.36□□□□□ -0.27
CDH5-201ENST00000341529 SEPT7Q16181 437 aaKnown RBP13.36□□□□□ -0.27
CDH5-201ENST00000341529 CCDC174Q6PII3 467 aa13.36□□□□□ -0.27
CDH5-201ENST00000341529 TMTC1Q8IUR5 882 aa13.36□□□□□ -0.27
CDH5-201ENST00000341529 KLHL7Q8IXQ5 586 aa13.36□□□□□ -0.27
CDH5-201ENST00000341529 DPF2Q92785 391 aa13.36□□□□□ -0.27
CDH5-201ENST00000341529 FAM212AQ96EL1 285 aa13.36□□□□□ -0.27
CDH5-201ENST00000341529 RBM17Q96I25 401 aaKnown RBP13.36□□□□□ -0.27
CDH5-201ENST00000341529 B4DLN1 442 aa13.36□□□□□ -0.27
CDH5-201ENST00000341529 RPN1P04843 607 aaKnown RBP13.36□□□□□ -0.27
CDH5-201ENST00000341529 CYP27A1Q02318 531 aa13.36□□□□□ -0.27
CDH5-201ENST00000341529 SPATA1Q5VX52 437 aa13.36□□□□□ -0.27
CDH5-201ENST00000341529 HS2ST1Q7LGA3 356 aa13.36□□□□□ -0.27
CDH5-201ENST00000341529 PP2D1A8MPX8 630 aa13.35□□□□□ -0.27
CDH5-201ENST00000341529 GSG1L2A8MUP6 293 aa13.35□□□□□ -0.27
CDH5-201ENST00000341529 CTDNEP1O95476 244 aa13.35□□□□□ -0.27
CDH5-201ENST00000341529 CYP19A1P11511 503 aaPredicted RBP13.35□□□□□ -0.27
CDH5-201ENST00000341529 KCTD1Q719H9 257 aa13.35□□□□□ -0.27
CDH5-201ENST00000341529 CCDC25Q86WR0 208 aa13.35□□□□□ -0.27
CDH5-201ENST00000341529 SLC35F6Q8N357 371 aa13.35□□□□□ -0.27
CDH5-201ENST00000341529 OR8K1Q8NGG5 319 aa13.35□□□□□ -0.27
CDH5-201ENST00000341529 TCHPQ9BT92 498 aa13.35□□□□□ -0.27
CDH5-201ENST00000341529 CDCA7Q9BWT1 371 aaPredicted RBP13.35□□□□□ -0.27
CDH5-201ENST00000341529 KRT25Q7Z3Z0 450 aa13.35□□□□□ -0.27
CDH5-201ENST00000341529 CCDC65Q8IXS2 484 aa13.35□□□□□ -0.27
CDH5-201ENST00000341529 RNF26Q9BY78 433 aaPredicted RBP13.35□□□□□ -0.27
CDH5-201ENST00000341529 LRRC27Q9C0I9 530 aa13.35□□□□□ -0.27
CDH5-201ENST00000341529 HSF2BPO75031 334 aa13.35□□□□□ -0.27
CDH5-201ENST00000341529 MCM3P25205 808 aa13.35□□□□□ -0.27
CDH5-201ENST00000341529 SNAP25P60880 206 aa13.35□□□□□ -0.27
CDH5-201ENST00000341529 PRR16Q569H4 304 aa13.35□□□□□ -0.27
CDH5-201ENST00000341529 CNNM4Q6P4Q7 775 aa13.35□□□□□ -0.27
CDH5-201ENST00000341529 NRXN1Q9ULB1 1477 aa13.35□□□□□ -0.27
CDH5-201ENST00000341529 FDPSP14324 419 aaKnown RBP13.34□□□□□ -0.27
CDH5-201ENST00000341529 HPDP32754 393 aaPredicted RBP13.34□□□□□ -0.27
CDH5-201ENST00000341529 EXOSC10Q01780 885 aaKnown RBP13.34□□□□□ -0.27
CDH5-201ENST00000341529 SHC4Q6S5L8 630 aa13.34□□□□□ -0.27
CDH5-201ENST00000341529 SEPT12Q8IYM1 358 aa13.34□□□□□ -0.27
CDH5-201ENST00000341529 PIGSQ96S52 555 aa13.34□□□□□ -0.27
CDH5-201ENST00000341529 LY9Q9HBG7 655 aa13.34□□□□□ -0.27
CDH5-201ENST00000341529 RIPOR2Q9Y4F9 1068 aa13.34□□□□□ -0.27
CDH5-201ENST00000341529 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.34□□□□□ -0.27
CDH5-201ENST00000341529 UBN2Q6ZU65 1347 aa13.34□□□□□ -0.27
CDH5-201ENST00000341529 PPP6R2O75170 966 aa13.34□□□□□ -0.27
CDH5-201ENST00000341529 DPH6Q7L8W6 267 aa13.34□□□□□ -0.27
CDH5-201ENST00000341529 IRX2Q9BZI1 471 aaPredicted RBP13.34□□□□□ -0.27
CDH5-201ENST00000341529 FOXP1Q9H334 677 aaPredicted RBP13.34□□□□□ -0.27
CDH5-201ENST00000341529 HGSO14964 777 aaPredicted RBP13.34□□□□□ -0.27
CDH5-201ENST00000341529 KIAA0753Q2KHM9 967 aa13.34□□□□□ -0.27
CDH5-201ENST00000341529 ENAHQ8N8S7 591 aaPredicted RBP13.34□□□□□ -0.27
CDH5-201ENST00000341529 DBNDD1Q9H9R9 158 aa13.34□□□□□ -0.27
CDH5-201ENST00000341529 SALL3Q9BXA9 1300 aa13.34□□□□□ -0.27
CDH5-201ENST00000341529 TRIM49BA6NDI0 452 aa13.33□□□□□ -0.27
CDH5-201ENST00000341529 LIFRP42702 1097 aa13.33□□□□□ -0.27
CDH5-201ENST00000341529 COPB1P53618 953 aaKnown RBP13.33□□□□□ -0.27
CDH5-201ENST00000341529 ADAT2Q7Z6V5 191 aaKnown RBP13.33□□□□□ -0.27
CDH5-201ENST00000341529 TEX33O43247 280 aa13.33□□□□□ -0.28
CDH5-201ENST00000341529 OR52Z1P0C646 297 aa13.33□□□□□ -0.28
CDH5-201ENST00000341529 CXCR5P32302 372 aa13.33□□□□□ -0.28
CDH5-201ENST00000341529 ANTXR2P58335 489 aa13.33□□□□□ -0.28
CDH5-201ENST00000341529 PPP2R5BQ15173 497 aa13.33□□□□□ -0.28
CDH5-201ENST00000341529 IFIH1Q9BYX4 1025 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms