RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 CRKLP46109 303 aaKnown RBP16.23■□□□□ 0.19
CPSF7-201ENST00000340437 DNA2P51530 1060 aa16.23■□□□□ 0.19
CPSF7-201ENST00000340437 ZNF34Q8IZ26 560 aa16.23■□□□□ 0.19
CPSF7-201ENST00000340437 FERMT2Q96AC1 680 aa16.23■□□□□ 0.19
CPSF7-201ENST00000340437 CCDC122Q5T0U0 273 aa16.22■□□□□ 0.19
CPSF7-201ENST00000340437 ANKRD18AQ8IVF6 992 aa16.22■□□□□ 0.19
CPSF7-201ENST00000340437 GSPT2Q8IYD1 628 aaKnown RBP16.22■□□□□ 0.19
CPSF7-201ENST00000340437 MCM9Q9NXL9 1143 aa16.22■□□□□ 0.19
CPSF7-201ENST00000340437 ADAMTS7Q9UKP4 1686 aa16.22■□□□□ 0.19
CPSF7-201ENST00000340437 PRPF3O43395 683 aaKnown RBP16.22■□□□□ 0.19
CPSF7-201ENST00000340437 RPN1P04843 607 aaKnown RBP16.22■□□□□ 0.19
CPSF7-201ENST00000340437 GOLGA8HP0CJ92 632 aa16.22■□□□□ 0.19
CPSF7-201ENST00000340437 CYP26C1Q6V0L0 522 aa16.22■□□□□ 0.19
CPSF7-201ENST00000340437 HEATR3Q7Z4Q2 680 aa16.22■□□□□ 0.19
CPSF7-201ENST00000340437 CCDC151A5D8V7 595 aa16.22■□□□□ 0.19
CPSF7-201ENST00000340437 HDXQ7Z353 690 aa16.22■□□□□ 0.19
CPSF7-201ENST00000340437 TMTC1Q8IUR5 882 aa16.22■□□□□ 0.19
CPSF7-201ENST00000340437 MAGEC2Q9UBF1 373 aaPredicted RBP16.22■□□□□ 0.19
CPSF7-201ENST00000340437 STX8Q9UNK0 236 aa16.22■□□□□ 0.19
CPSF7-201ENST00000340437 KIF1AQ12756 1690 aa16.22■□□□□ 0.19
CPSF7-201ENST00000340437 TJP1Q07157 1748 aa16.21■□□□□ 0.19
CPSF7-201ENST00000340437 CCDC194A0A1B0GVG4 234 aa16.21■□□□□ 0.19
CPSF7-201ENST00000340437 UBA7P41226 1012 aa16.21■□□□□ 0.19
CPSF7-201ENST00000340437 CYP27A1Q02318 531 aa16.21■□□□□ 0.19
CPSF7-201ENST00000340437 CCDC178Q5BJE1 867 aa16.21■□□□□ 0.19
CPSF7-201ENST00000340437 CTR9Q6PD62 1173 aa16.21■□□□□ 0.19
CPSF7-201ENST00000340437 C3orf67Q6ZVT6 689 aa16.21■□□□□ 0.19
CPSF7-201ENST00000340437 MTRQ99707 1265 aa16.21■□□□□ 0.19
CPSF7-201ENST00000340437 LUC7L2Q9Y383 392 aaKnown RBP16.21■□□□□ 0.19
CPSF7-201ENST00000340437 EPN1Q9Y6I3 576 aaPredicted RBP16.21■□□□□ 0.19
CPSF7-201ENST00000340437 COL5A2P05997 1499 aaPredicted RBP16.21■□□□□ 0.19
CPSF7-201ENST00000340437 TTC26A0AVF1 554 aa16.21■□□□□ 0.19
CPSF7-201ENST00000340437 TRIM21P19474 475 aaKnown RBP16.21■□□□□ 0.19
CPSF7-201ENST00000340437 IL6STP40189 918 aaPredicted RBP16.21■□□□□ 0.19
CPSF7-201ENST00000340437 KLK7P49862 253 aa16.21■□□□□ 0.19
CPSF7-201ENST00000340437 RAD51AP2Q09MP3 1159 aa16.21■□□□□ 0.19
CPSF7-201ENST00000340437 IL17AQ16552 155 aa16.21■□□□□ 0.19
CPSF7-201ENST00000340437 INF2Q27J81 1249 aa16.21■□□□□ 0.19
CPSF7-201ENST00000340437 TCP11X2Q5H9J9 407 aa16.21■□□□□ 0.19
CPSF7-201ENST00000340437 TRIM34Q9BYJ4 488 aa16.21■□□□□ 0.19
CPSF7-201ENST00000340437 MYO6Q9UM54 1294 aa16.21■□□□□ 0.19
CPSF7-201ENST00000340437 TTF2Q9UNY4 1162 aaKnown RBP16.21■□□□□ 0.19
CPSF7-201ENST00000340437 PARP1P09874 1014 aaKnown RBP16.21■□□□□ 0.18
CPSF7-201ENST00000340437 SCG2P13521 617 aa16.21■□□□□ 0.18
CPSF7-201ENST00000340437 TROAPQ12815 778 aa16.21■□□□□ 0.18
CPSF7-201ENST00000340437 CDKAL1Q5VV42 579 aa16.21■□□□□ 0.18
CPSF7-201ENST00000340437 LEKR1Q6ZMV7 388 aa16.21■□□□□ 0.18
CPSF7-201ENST00000340437 RASGRP2Q7LDG7 609 aa16.21■□□□□ 0.18
CPSF7-201ENST00000340437 DYNLL2Q96FJ2 89 aa16.21■□□□□ 0.18
CPSF7-201ENST00000340437 JADE2Q9NQC1 790 aa16.21■□□□□ 0.18
CPSF7-201ENST00000340437 B4DLN1 442 aa16.2■□□□□ 0.18
CPSF7-201ENST00000340437 PMS1P54277 932 aaKnown RBP16.2■□□□□ 0.18
CPSF7-201ENST00000340437 ERFEQ4G0M1 354 aa16.2■□□□□ 0.18
CPSF7-201ENST00000340437 TMTC3Q6ZXV5 915 aa16.2■□□□□ 0.18
CPSF7-201ENST00000340437 STAG2Q8N3U4 1231 aa16.2■□□□□ 0.18
CPSF7-201ENST00000340437 NAA15Q9BXJ9 866 aaKnown RBP16.2■□□□□ 0.18
CPSF7-201ENST00000340437 TRIM66O15016 1216 aa16.2■□□□□ 0.18
CPSF7-201ENST00000340437 USP17L8P0C7I0 530 aa16.2■□□□□ 0.18
CPSF7-201ENST00000340437 PRDX5P30044 214 aa16.2■□□□□ 0.18
CPSF7-201ENST00000340437 PPARDQ03181 441 aa16.2■□□□□ 0.18
CPSF7-201ENST00000340437 BRD3Q15059 726 aa16.2■□□□□ 0.18
CPSF7-201ENST00000340437 HPS3Q969F9 1004 aa16.2■□□□□ 0.18
CPSF7-201ENST00000340437 CCDC87Q9NVE4 849 aa16.2■□□□□ 0.18
CPSF7-201ENST00000340437 KAT14Q9H8E8 782 aa16.2■□□□□ 0.18
CPSF7-201ENST00000340437 PNPLA7Q6ZV29 1317 aa16.19■□□□□ 0.18
CPSF7-201ENST00000340437 EIF3JO75822 258 aaKnown RBP16.19■□□□□ 0.18
CPSF7-201ENST00000340437 BEND6Q5SZJ8 279 aaPredicted RBP16.19■□□□□ 0.18
CPSF7-201ENST00000340437 SPATA20Q8TB22 786 aa16.19■□□□□ 0.18
CPSF7-201ENST00000340437 RIN2Q8WYP3 895 aaPredicted RBP16.19■□□□□ 0.18
CPSF7-201ENST00000340437 IPO7O95373 1038 aaKnown RBP16.19■□□□□ 0.18
CPSF7-201ENST00000340437 TFAP4Q01664 338 aa16.19■□□□□ 0.18
CPSF7-201ENST00000340437 MKNK2Q9HBH9 465 aa16.19■□□□□ 0.18
CPSF7-201ENST00000340437 C4AP0C0L4 1744 aa16.19■□□□□ 0.18
CPSF7-201ENST00000340437 C4BP0C0L5 1744 aa16.19■□□□□ 0.18
CPSF7-201ENST00000340437 MTIF2P46199 727 aaKnown RBP16.18■□□□□ 0.18
CPSF7-201ENST00000340437 CASP8Q14790 479 aa16.18■□□□□ 0.18
CPSF7-201ENST00000340437 GOLGA6L1Q8N7Z2 621 aa16.18■□□□□ 0.18
CPSF7-201ENST00000340437 RSPH14Q9UHP6 348 aa16.18■□□□□ 0.18
CPSF7-201ENST00000340437 LCMT1Q9UIC8 334 aa16.18■□□□□ 0.18
CPSF7-201ENST00000340437 DUSP10Q9Y6W6 482 aa16.18■□□□□ 0.18
CPSF7-201ENST00000340437 AKAP11Q9UKA4 1901 aa16.18■□□□□ 0.18
CPSF7-201ENST00000340437 ZNF185O15231 689 aa16.18■□□□□ 0.18
CPSF7-201ENST00000340437 GTPBP6O43824 516 aaPredicted RBP16.18■□□□□ 0.18
CPSF7-201ENST00000340437 NDUFA10O95299 355 aa16.18■□□□□ 0.18
CPSF7-201ENST00000340437 USP5P45974 858 aa16.18■□□□□ 0.18
CPSF7-201ENST00000340437 ATP2C1P98194 919 aaPredicted RBP16.18■□□□□ 0.18
CPSF7-201ENST00000340437 ENOX2Q16206 610 aaKnown RBP16.18■□□□□ 0.18
CPSF7-201ENST00000340437 DTHD1Q6ZMT9 781 aa16.18■□□□□ 0.18
CPSF7-201ENST00000340437 CCDC148Q8NFR7 591 aa16.18■□□□□ 0.18
CPSF7-201ENST00000340437 CELF1Q92879 486 aaKnown RBP16.18■□□□□ 0.18
CPSF7-201ENST00000340437 RBM28Q9NW13 759 aaKnown RBP16.18■□□□□ 0.18
CPSF7-201ENST00000340437 ERVV-1B6SEH8 477 aa16.18■□□□□ 0.18
CPSF7-201ENST00000340437 ATP1A1P05023 1023 aaKnown RBP16.18■□□□□ 0.18
CPSF7-201ENST00000340437 FOXR1Q6PIV2 292 aa16.18■□□□□ 0.18
CPSF7-201ENST00000340437 SH3RF1Q7Z6J0 888 aa16.18■□□□□ 0.18
CPSF7-201ENST00000340437 RIOK1Q9BRS2 568 aaKnown RBP16.18■□□□□ 0.18
CPSF7-201ENST00000340437 AGPAT5Q9NUQ2 364 aa16.18■□□□□ 0.18
CPSF7-201ENST00000340437 SAP30BPQ9UHR5 308 aaKnown RBP16.18■□□□□ 0.18
CPSF7-201ENST00000340437 ATRNO75882 1429 aa16.18■□□□□ 0.18
CPSF7-201ENST00000340437 SRCAPQ6ZRS2 3230 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms