RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 MKL1Q969V6 931 aa24.45■■□□□ 1.5
VRK2-201ENST00000340157 FSD2A1L4K1 749 aa24.44■■□□□ 1.5
VRK2-201ENST00000340157 YEATS4O95619 227 aa24.44■■□□□ 1.5
VRK2-201ENST00000340157 GH2P01242 217 aa24.44■■□□□ 1.5
VRK2-201ENST00000340157 TOB1P50616 345 aaPredicted RBP24.44■■□□□ 1.5
VRK2-201ENST00000340157 TBC1D10BQ4KMP7 808 aaPredicted RBP24.44■■□□□ 1.5
VRK2-201ENST00000340157 TNFRSF25Q93038 417 aa24.44■■□□□ 1.5
VRK2-201ENST00000340157 YBX3P16989 372 aaKnown RBP eCLIP24.43■■□□□ 1.56e-6■□□□□ 10.9
VRK2-201ENST00000340157 SMARCA1P28370 1054 aa24.43■■□□□ 1.5
VRK2-201ENST00000340157 ZNF445P59923 1031 aa24.43■■□□□ 1.5
VRK2-201ENST00000340157 ZNF543Q08ER8 600 aa24.43■■□□□ 1.5
VRK2-201ENST00000340157 ASPRV1Q53RT3 343 aa24.43■■□□□ 1.5
VRK2-201ENST00000340157 EARS2Q5JPH6 523 aaKnown RBP24.43■■□□□ 1.5
VRK2-201ENST00000340157 UBA5Q9GZZ9 404 aa24.43■■□□□ 1.5
VRK2-201ENST00000340157 ICA1Q05084 483 aa24.43■■□□□ 1.5
VRK2-201ENST00000340157 PPP4R3BQ5MIZ7 849 aa24.43■■□□□ 1.5
VRK2-201ENST00000340157 WWC2Q6AWC2 1192 aa24.43■■□□□ 1.5
VRK2-201ENST00000340157 FAM205CA6NFA0 338 aa24.42■■□□□ 1.5
VRK2-201ENST00000340157 TBC1D12O60347 775 aa24.42■■□□□ 1.5
VRK2-201ENST00000340157 KRT2P35908 639 aa24.42■■□□□ 1.5
VRK2-201ENST00000340157 RASA3Q14644 834 aa24.42■■□□□ 1.5
VRK2-201ENST00000340157 PTPAQ15257 358 aa24.42■■□□□ 1.5
VRK2-201ENST00000340157 TEPSINQ96N21 525 aa24.42■■□□□ 1.5
VRK2-201ENST00000340157 RIOX1Q9H6W3 641 aa24.42■■□□□ 1.5
VRK2-201ENST00000340157 ATAD5Q96QE3 1844 aa24.42■■□□□ 1.5
VRK2-201ENST00000340157 SF3A1Q15459 793 aaKnown RBP24.41■■□□□ 1.5
VRK2-201ENST00000340157 KIF4BQ2VIQ3 1234 aa24.41■■□□□ 1.5
VRK2-201ENST00000340157 NOM1Q5C9Z4 860 aaKnown RBP24.41■■□□□ 1.5
VRK2-201ENST00000340157 MIGA2Q7L4E1 593 aa24.41■■□□□ 1.5
VRK2-201ENST00000340157 PCDHA7Q9UN72 937 aa24.41■■□□□ 1.5
VRK2-201ENST00000340157 MAP3K10Q02779 954 aa24.41■■□□□ 1.5
VRK2-201ENST00000340157 STK38Q15208 465 aa24.41■■□□□ 1.5
VRK2-201ENST00000340157 GPCPD1Q9NPB8 672 aa24.41■■□□□ 1.5
VRK2-201ENST00000340157 SH3GLB2Q9NR46 395 aa24.41■■□□□ 1.5
VRK2-201ENST00000340157 SYCE3A1L190 88 aa24.4■■□□□ 1.5
VRK2-201ENST00000340157 STXBP3O00186 592 aa24.4■■□□□ 1.5
VRK2-201ENST00000340157 TTBK2Q6IQ55 1244 aa24.4■■□□□ 1.5
VRK2-201ENST00000340157 SYAP1Q96A49 352 aaPredicted RBP24.4■■□□□ 1.5
VRK2-201ENST00000340157 GOLGA6L4A6NEF3 574 aa24.39■■□□□ 1.5
VRK2-201ENST00000340157 SPTLC2O15270 562 aa24.39■■□□□ 1.5
VRK2-201ENST00000340157 SLC39A14Q15043 492 aa24.39■■□□□ 1.5
VRK2-201ENST00000340157 CCDC183Q5T5S1 534 aa24.39■■□□□ 1.5
VRK2-201ENST00000340157 GPC2Q8N158 579 aa24.39■■□□□ 1.5
VRK2-201ENST00000340157 KCNG4Q8TDN1 519 aa24.39■■□□□ 1.5
VRK2-201ENST00000340157 PIGSQ96S52 555 aa24.39■■□□□ 1.5
VRK2-201ENST00000340157 BARHL2Q9NY43 387 aa24.39■■□□□ 1.5
VRK2-201ENST00000340157 GPRC5DQ9NZD1 345 aa24.39■■□□□ 1.5
VRK2-201ENST00000340157 HACL1Q9UJ83 578 aa24.39■■□□□ 1.5
VRK2-201ENST00000340157 A0A1W2PRG0 241 aa24.38■■□□□ 1.49
VRK2-201ENST00000340157 ME1P48163 572 aa24.38■■□□□ 1.49
VRK2-201ENST00000340157 NLRP5P59047 1200 aa24.38■■□□□ 1.49
VRK2-201ENST00000340157 HEATR3Q7Z4Q2 680 aa24.38■■□□□ 1.49
VRK2-201ENST00000340157 BICD2Q8TD16 824 aa24.38■■□□□ 1.49
VRK2-201ENST00000340157 GOLPH3LQ9H4A5 285 aa24.38■■□□□ 1.49
VRK2-201ENST00000340157 VAT1LQ9HCJ6 419 aa24.38■■□□□ 1.49
VRK2-201ENST00000340157 CABP5Q9NP86 173 aa24.38■■□□□ 1.49
VRK2-201ENST00000340157 TNNI2P48788 182 aa24.38■■□□□ 1.49
VRK2-201ENST00000340157 KCTD1Q719H9 257 aa24.38■■□□□ 1.49
VRK2-201ENST00000340157 HOMER1Q86YM7 354 aa24.38■■□□□ 1.49
VRK2-201ENST00000340157 TRPM4Q8TD43 1214 aa24.38■■□□□ 1.49
VRK2-201ENST00000340157 RRP36Q96EU6 259 aaKnown RBP24.38■■□□□ 1.49
VRK2-201ENST00000340157 RILPL1Q5EBL4 403 aa24.37■■□□□ 1.49
VRK2-201ENST00000340157 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.37■■□□□ 1.49
VRK2-201ENST00000340157 ZBTB21Q9ULJ3 1066 aa24.37■■□□□ 1.49
VRK2-201ENST00000340157 M0R2N6 131 aa24.36■■□□□ 1.49
VRK2-201ENST00000340157 NR1I2O75469 434 aa24.36■■□□□ 1.49
VRK2-201ENST00000340157 TNFAIP1Q13829 316 aa24.36■■□□□ 1.49
VRK2-201ENST00000340157 CCDC96Q2M329 555 aa24.36■■□□□ 1.49
VRK2-201ENST00000340157 AXDND1Q5T1B0 1012 aaPredicted RBP24.36■■□□□ 1.49
VRK2-201ENST00000340157 GPATCH4Q5T3I0 446 aaKnown RBP24.36■■□□□ 1.49
VRK2-201ENST00000340157 SLFN13Q68D06 897 aa24.36■■□□□ 1.49
VRK2-201ENST00000340157 GMCL1P1Q8NEA9 526 aa24.36■■□□□ 1.49
VRK2-201ENST00000340157 DACT1Q9NYF0 836 aa24.36■■□□□ 1.49
VRK2-201ENST00000340157 PCDHB6Q9Y5E3 794 aa24.36■■□□□ 1.49
VRK2-201ENST00000340157 WNT7AO00755 349 aa24.36■■□□□ 1.49
VRK2-201ENST00000340157 ADALQ6DHV7 355 aa24.36■■□□□ 1.49
VRK2-201ENST00000340157 JMJD4Q9H9V9 463 aa24.36■■□□□ 1.49
VRK2-201ENST00000340157 BRMS1Q9HCU9 246 aa24.36■■□□□ 1.49
VRK2-201ENST00000340157 GOLGA6L3A6NEY3 463 aa24.35■■□□□ 1.49
VRK2-201ENST00000340157 PHF20L1A8MW92 1017 aa24.35■■□□□ 1.49
VRK2-201ENST00000340157 F5H6K3 240 aa24.35■■□□□ 1.49
VRK2-201ENST00000340157 H7C1D1 291 aa24.35■■□□□ 1.49
VRK2-201ENST00000340157 MARCKSP29966 332 aaPredicted RBP24.35■■□□□ 1.49
VRK2-201ENST00000340157 SLC16A2P36021 539 aa24.35■■□□□ 1.49
VRK2-201ENST00000340157 KLRC3Q07444 240 aa24.35■■□□□ 1.49
VRK2-201ENST00000340157 CCAR1Q8IX12 1150 aaKnown RBP24.35■■□□□ 1.49
VRK2-201ENST00000340157 ADGRF4Q8IZF3 695 aa24.35■■□□□ 1.49
VRK2-201ENST00000340157 DCAF4Q8WV16 495 aa24.35■■□□□ 1.49
VRK2-201ENST00000340157 PCDHA4Q9UN74 947 aa24.35■■□□□ 1.49
VRK2-201ENST00000340157 POLR2AP24928 1970 aaKnown RBP24.35■■□□□ 1.49
VRK2-201ENST00000340157 NDUFB10O96000 172 aa24.34■■□□□ 1.49
VRK2-201ENST00000340157 CALML3P27482 149 aa24.34■■□□□ 1.49
VRK2-201ENST00000340157 CAP2P40123 477 aa24.34■■□□□ 1.49
VRK2-201ENST00000340157 EPS15P42566 896 aa24.34■■□□□ 1.49
VRK2-201ENST00000340157 ECE1P42892 770 aa24.34■■□□□ 1.49
VRK2-201ENST00000340157 BLIDQ8IZY5 108 aa24.34■■□□□ 1.49
VRK2-201ENST00000340157 ACER1Q8TDN7 264 aa24.34■■□□□ 1.49
VRK2-201ENST00000340157 MTMR8Q96EF0 704 aa24.34■■□□□ 1.49
VRK2-201ENST00000340157 DEFB129Q9H1M3 183 aa24.34■■□□□ 1.49
VRK2-201ENST00000340157 A0A1W2PQ27 194 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms