RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 TTLL12Q14166 644 aaPredicted RBP7.05□□□□□ -1.28
PRKDC-202ENST00000338368 PPP4R3AQ6IN85 833 aa7.05□□□□□ -1.28
PRKDC-202ENST00000338368 NSUN4Q96CB9 384 aaKnown RBP7.05□□□□□ -1.28
PRKDC-202ENST00000338368 CCDC66A2RUB6 948 aa7.05□□□□□ -1.28
PRKDC-202ENST00000338368 MCM3P25205 808 aa7.05□□□□□ -1.28
PRKDC-202ENST00000338368 CDK8P49336 464 aa7.05□□□□□ -1.28
PRKDC-202ENST00000338368 ADKP55263 362 aaKnown RBP7.05□□□□□ -1.28
PRKDC-202ENST00000338368 HAUS3Q68CZ6 603 aa7.05□□□□□ -1.28
PRKDC-202ENST00000338368 GRAMD1CQ8IYS0 662 aa7.05□□□□□ -1.28
PRKDC-202ENST00000338368 RNF216Q9NWF9 866 aaPredicted RBP7.05□□□□□ -1.28
PRKDC-202ENST00000338368 ZBTB21Q9ULJ3 1066 aa7.05□□□□□ -1.28
PRKDC-202ENST00000338368 CTR9Q6PD62 1173 aa7.05□□□□□ -1.28
PRKDC-202ENST00000338368 NELFBQ8WX92 580 aa7.05□□□□□ -1.28
PRKDC-202ENST00000338368 UIMC1Q96RL1 719 aa7.05□□□□□ -1.28
PRKDC-202ENST00000338368 SLFN13Q68D06 897 aa7.05□□□□□ -1.28
PRKDC-202ENST00000338368 EPSTI1Q96J88 318 aa7.05□□□□□ -1.28
PRKDC-202ENST00000338368 COA1Q9GZY4 146 aa7.05□□□□□ -1.28
PRKDC-202ENST00000338368 LEKR1Q6ZMV7 388 aa7.05□□□□□ -1.28
PRKDC-202ENST00000338368 KIAA1524Q8TCG1 905 aa7.05□□□□□ -1.28
PRKDC-202ENST00000338368 CACTINQ8WUQ7 758 aaKnown RBP7.05□□□□□ -1.28
PRKDC-202ENST00000338368 GJD4Q96KN9 370 aaPredicted RBP7.05□□□□□ -1.28
PRKDC-202ENST00000338368 TXNRD1Q16881 649 aa7.05□□□□□ -1.28
PRKDC-202ENST00000338368 GPATCH4Q5T3I0 446 aaKnown RBP7.05□□□□□ -1.28
PRKDC-202ENST00000338368 INTS5Q6P9B9 1019 aaKnown RBP7.05□□□□□ -1.28
PRKDC-202ENST00000338368 USP17L2Q6R6M4 530 aa7.05□□□□□ -1.28
PRKDC-202ENST00000338368 NEK11Q8NG66 645 aa7.05□□□□□ -1.28
PRKDC-202ENST00000338368 EPB41L4AQ9HCS5 686 aaPredicted RBP7.05□□□□□ -1.28
PRKDC-202ENST00000338368 RAD51AP2Q09MP3 1159 aa7.05□□□□□ -1.28
PRKDC-202ENST00000338368 USH1GQ495M9 461 aa7.05□□□□□ -1.28
PRKDC-202ENST00000338368 NCAPH2Q6IBW4 605 aa7.05□□□□□ -1.28
PRKDC-202ENST00000338368 ENAHQ8N8S7 591 aaPredicted RBP7.05□□□□□ -1.28
PRKDC-202ENST00000338368 CTAGE9A4FU28 777 aa7.05□□□□□ -1.28
PRKDC-202ENST00000338368 FAM193AP78312 1265 aa7.05□□□□□ -1.28
PRKDC-202ENST00000338368 TRIM14Q14142 442 aa7.05□□□□□ -1.28
PRKDC-202ENST00000338368 NELFCDQ8IXH7 590 aa7.05□□□□□ -1.28
PRKDC-202ENST00000338368 CEP112Q8N8E3 955 aa7.05□□□□□ -1.28
PRKDC-202ENST00000338368 USP8P40818 1118 aa7.05□□□□□ -1.28
PRKDC-202ENST00000338368 FDPSP14324 419 aaKnown RBP7.05□□□□□ -1.28
PRKDC-202ENST00000338368 RCAN1P53805 252 aa7.05□□□□□ -1.28
PRKDC-202ENST00000338368 ARID5AQ03989 594 aa7.05□□□□□ -1.28
PRKDC-202ENST00000338368 TBCKQ8TEA7 893 aa7.05□□□□□ -1.28
PRKDC-202ENST00000338368 PKD2L1Q9P0L9 805 aa7.05□□□□□ -1.28
PRKDC-202ENST00000338368 UBN2Q6ZU65 1347 aa7.04□□□□□ -1.28
PRKDC-202ENST00000338368 TCP10L2B9ZVM9 353 aa7.04□□□□□ -1.28
PRKDC-202ENST00000338368 TMED8Q6PL24 325 aaPredicted RBP7.04□□□□□ -1.28
PRKDC-202ENST00000338368 CPXCR1Q8N123 301 aa7.04□□□□□ -1.28
PRKDC-202ENST00000338368 ERO1AQ96HE7 468 aa7.04□□□□□ -1.28
PRKDC-202ENST00000338368 PIGSQ96S52 555 aa7.04□□□□□ -1.28
PRKDC-202ENST00000338368 ARFGAP3Q9NP61 516 aa7.04□□□□□ -1.28
PRKDC-202ENST00000338368 FGFR2P21802 821 aa7.04□□□□□ -1.28
PRKDC-202ENST00000338368 MCTP2Q6DN12 878 aa7.04□□□□□ -1.28
PRKDC-202ENST00000338368 PUF60Q9UHX1 559 aaKnown RBP7.04□□□□□ -1.28
PRKDC-202ENST00000338368 DNM3Q9UQ16 869 aa7.04□□□□□ -1.28
PRKDC-202ENST00000338368 OR52Z1P0C646 297 aa7.04□□□□□ -1.28
PRKDC-202ENST00000338368 PLS1Q14651 629 aa7.04□□□□□ -1.28
PRKDC-202ENST00000338368 MAP9Q49MG5 647 aa7.04□□□□□ -1.28
PRKDC-202ENST00000338368 FBXO11Q86XK2 927 aa7.04□□□□□ -1.28
PRKDC-202ENST00000338368 IGDCC4Q8TDY8 1250 aa7.04□□□□□ -1.28
PRKDC-202ENST00000338368 GJA3Q9Y6H8 435 aa7.04□□□□□ -1.28
PRKDC-202ENST00000338368 TACC1O75410 805 aa7.04□□□□□ -1.28
PRKDC-202ENST00000338368 KRT13P13646 458 aa7.04□□□□□ -1.28
PRKDC-202ENST00000338368 CCDC174Q6PII3 467 aa7.04□□□□□ -1.28
PRKDC-202ENST00000338368 CHMP2AO43633 222 aa7.04□□□□□ -1.28
PRKDC-202ENST00000338368 CCDC172P0C7W6 258 aa7.04□□□□□ -1.28
PRKDC-202ENST00000338368 CYP26C1Q6V0L0 522 aa7.04□□□□□ -1.28
PRKDC-202ENST00000338368 CCDC122Q5T0U0 273 aa7.04□□□□□ -1.28
PRKDC-202ENST00000338368 TSC1Q92574 1164 aa7.04□□□□□ -1.28
PRKDC-202ENST00000338368 KIFC2Q96AC6 838 aa7.04□□□□□ -1.28
PRKDC-202ENST00000338368 TMEM47Q9BQJ4 181 aa7.04□□□□□ -1.28
PRKDC-202ENST00000338368 NT5C3AQ9H0P0 336 aa7.04□□□□□ -1.28
PRKDC-202ENST00000338368 CETN3O15182 167 aa7.04□□□□□ -1.28
PRKDC-202ENST00000338368 ENOX1Q8TC92 643 aaKnown RBP7.04□□□□□ -1.28
PRKDC-202ENST00000338368 ERCC3P19447 782 aa7.04□□□□□ -1.28
PRKDC-202ENST00000338368 CALRP27797 417 aaKnown RBP7.04□□□□□ -1.28
PRKDC-202ENST00000338368 NUP58Q9BVL2 599 aa7.04□□□□□ -1.28
PRKDC-202ENST00000338368 SPATA31A5Q5VU36 1347 aa7.04□□□□□ -1.28
PRKDC-202ENST00000338368 SPATA31A7Q8IWB4 1347 aa7.04□□□□□ -1.28
PRKDC-202ENST00000338368 PSDA5PKW4 1024 aaPredicted RBP7.04□□□□□ -1.28
PRKDC-202ENST00000338368 RPL13P26373 211 aaKnown RBP7.04□□□□□ -1.28
PRKDC-202ENST00000338368 PRR5LQ6MZQ0 368 aa7.04□□□□□ -1.28
PRKDC-202ENST00000338368 TMTC3Q6ZXV5 915 aa7.04□□□□□ -1.28
PRKDC-202ENST00000338368 GOLGA6L10A6NI86 522 aa7.04□□□□□ -1.28
PRKDC-202ENST00000338368 SH3RF3Q8TEJ3 882 aaPredicted RBP7.04□□□□□ -1.28
PRKDC-202ENST00000338368 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.04□□□□□ -1.283e-7■■■■■ 34.2
PRKDC-202ENST00000338368 JCADQ9P266 1359 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 SLC44A5Q8NCS7 719 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 OXER1Q8TDS5 423 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 PRDM10Q9NQV6 1147 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 MAN1B1Q9UKM7 699 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 CLRN2A0PK11 232 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 CTDNEP1O95476 244 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 TTLL1O95922 423 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 MMP10P09238 476 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 EVCP57679 992 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 IFI16Q16666 785 aaKnown RBP7.03□□□□□ -1.28
PRKDC-202ENST00000338368 SARM1Q6SZW1 724 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 LINC00116Q8NCU8 138 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 AK8Q96MA6 479 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 H7C1D1 291 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 hCG_1984214I3L0E3 225 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms