RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 STRBPQ96SI9 672 aaKnown RBP12.76□□□□□ -0.37
CAPN3-202ENST00000337571 FLRT1Q9NZU1 646 aa12.76□□□□□ -0.37
CAPN3-202ENST00000337571 DDX20Q9UHI6 824 aaKnown RBP12.76□□□□□ -0.37
CAPN3-202ENST00000337571 ZMYND8Q9ULU4 1186 aaPredicted RBP12.76□□□□□ -0.37
CAPN3-202ENST00000337571 SLC25A27O95847 323 aa12.75□□□□□ -0.37
CAPN3-202ENST00000337571 FCER1AP12319 257 aa12.75□□□□□ -0.37
CAPN3-202ENST00000337571 CYP2C19P33261 490 aa12.75□□□□□ -0.37
CAPN3-202ENST00000337571 TDO2P48775 406 aa12.75□□□□□ -0.37
CAPN3-202ENST00000337571 SBK1Q52WX2 424 aa12.75□□□□□ -0.37
CAPN3-202ENST00000337571 KIAA1755Q5JYT7 1200 aa12.75□□□□□ -0.37
CAPN3-202ENST00000337571 ZNF444Q8N0Y2 327 aaPredicted RBP12.75□□□□□ -0.37
CAPN3-202ENST00000337571 STK11IPQ8N1F8 1099 aa12.75□□□□□ -0.37
CAPN3-202ENST00000337571 ARRDC4Q8NCT1 418 aa12.75□□□□□ -0.37
CAPN3-202ENST00000337571 NPLOC4Q8TAT6 608 aa12.75□□□□□ -0.37
CAPN3-202ENST00000337571 APPBP2Q92624 585 aa12.75□□□□□ -0.37
CAPN3-202ENST00000337571 SENP6Q9GZR1 1112 aaPredicted RBP12.75□□□□□ -0.37
CAPN3-202ENST00000337571 PRO3102Q9H379 93 aa12.75□□□□□ -0.37
CAPN3-202ENST00000337571 RANBP2P49792 3224 aaKnown RBP12.75□□□□□ -0.37
CAPN3-202ENST00000337571 SYN1P17600 705 aa12.74□□□□□ -0.37
CAPN3-202ENST00000337571 BMP8BP34820 402 aa12.74□□□□□ -0.37
CAPN3-202ENST00000337571 OLFML2BQ68BL8 750 aa12.74□□□□□ -0.37
CAPN3-202ENST00000337571 RASEFQ8IZ41 740 aa12.74□□□□□ -0.37
CAPN3-202ENST00000337571 ABRAQ8N0Z2 381 aa12.74□□□□□ -0.37
CAPN3-202ENST00000337571 ATG4CQ96DT6 458 aa12.74□□□□□ -0.37
CAPN3-202ENST00000337571 NACAP1Q9BZK3 213 aa12.74□□□□□ -0.37
CAPN3-202ENST00000337571 TSPYL2Q9H2G4 693 aaPredicted RBP12.74□□□□□ -0.37
CAPN3-202ENST00000337571 CTDP1Q9Y5B0 961 aaPredicted RBP12.74□□□□□ -0.37
CAPN3-202ENST00000337571 ALPK3Q96L96 1907 aa12.74□□□□□ -0.37
CAPN3-202ENST00000337571 TTC41PQ6P2S7 1318 aa12.73□□□□□ -0.37
CAPN3-202ENST00000337571 GSG1L2A8MUP6 293 aa12.73□□□□□ -0.37
CAPN3-202ENST00000337571 PATL2C9JE40 543 aaKnown RBP12.73□□□□□ -0.37
CAPN3-202ENST00000337571 SMIM22K7EJ46 135 aa12.73□□□□□ -0.37
CAPN3-202ENST00000337571 GPAA1O43292 621 aa12.73□□□□□ -0.37
CAPN3-202ENST00000337571 SLC3A2P08195 630 aaKnown RBP12.73□□□□□ -0.37
CAPN3-202ENST00000337571 COL6A1P12109 1028 aa12.73□□□□□ -0.37
CAPN3-202ENST00000337571 KCTD2Q14681 263 aa12.73□□□□□ -0.37
CAPN3-202ENST00000337571 TSHZ3Q63HK5 1081 aa12.73□□□□□ -0.37
CAPN3-202ENST00000337571 OSBP2Q969R2 916 aa12.73□□□□□ -0.37
CAPN3-202ENST00000337571 MMP19Q99542 508 aa12.73□□□□□ -0.37
CAPN3-202ENST00000337571 ZNFX1Q9P2E3 1918 aaKnown RBP12.72□□□□□ -0.37
CAPN3-202ENST00000337571 PFASO15067 1338 aa12.72□□□□□ -0.37
CAPN3-202ENST00000337571 SZT2Q5T011 3432 aa12.72□□□□□ -0.37
CAPN3-202ENST00000337571 DNM1LO00429 736 aa12.72□□□□□ -0.37
CAPN3-202ENST00000337571 VWA5AO00534 786 aa12.72□□□□□ -0.37
CAPN3-202ENST00000337571 COPB2P35606 906 aa12.72□□□□□ -0.37
CAPN3-202ENST00000337571 STAT3P40763 770 aa12.72□□□□□ -0.37
CAPN3-202ENST00000337571 NUBP1P53384 320 aa12.72□□□□□ -0.37
CAPN3-202ENST00000337571 TMEM132BQ14DG7 1078 aa12.72□□□□□ -0.37
CAPN3-202ENST00000337571 FAM83BQ5T0W9 1011 aa12.72□□□□□ -0.37
CAPN3-202ENST00000337571 IFNLR1Q8IU57 520 aaPredicted RBP12.72□□□□□ -0.37
CAPN3-202ENST00000337571 GDF15Q99988 308 aa12.72□□□□□ -0.37
CAPN3-202ENST00000337571 LBHD1Q9BQE6 289 aaPredicted RBP12.72□□□□□ -0.37
CAPN3-202ENST00000337571 UBE2OQ9C0C9 1292 aaKnown RBP12.72□□□□□ -0.37
CAPN3-202ENST00000337571 CLIP2Q9UDT6 1046 aa12.72□□□□□ -0.37
CAPN3-202ENST00000337571 PRKAG2Q9UGJ0 569 aa12.72□□□□□ -0.37
CAPN3-202ENST00000337571 ADAMTS5Q9UNA0 930 aa12.72□□□□□ -0.37
CAPN3-202ENST00000337571 RLFQ13129 1914 aa12.72□□□□□ -0.37
CAPN3-202ENST00000337571 KBTBD13C9JR72 458 aa12.71□□□□□ -0.37
CAPN3-202ENST00000337571 F5H6K3 240 aa12.71□□□□□ -0.37
CAPN3-202ENST00000337571 SEPT4O43236 478 aa12.71□□□□□ -0.37
CAPN3-202ENST00000337571 COBLO75128 1261 aa12.71□□□□□ -0.37
CAPN3-202ENST00000337571 RASA1P20936 1047 aa12.71□□□□□ -0.37
CAPN3-202ENST00000337571 MAGEA10P43363 369 aaPredicted RBP12.71□□□□□ -0.37
CAPN3-202ENST00000337571 PDE4BQ07343 736 aa12.71□□□□□ -0.37
CAPN3-202ENST00000337571 KLRC3Q07444 240 aa12.71□□□□□ -0.37
CAPN3-202ENST00000337571 LRRC26Q2I0M4 334 aa12.71□□□□□ -0.37
CAPN3-202ENST00000337571 RIOX2Q8IUF8 465 aa12.71□□□□□ -0.37
CAPN3-202ENST00000337571 ZNF579Q8NAF0 562 aaKnown RBP12.71□□□□□ -0.37
CAPN3-202ENST00000337571 PRPF38AQ8NAV1 312 aaKnown RBP12.71□□□□□ -0.37
CAPN3-202ENST00000337571 MAML3Q96JK9 1138 aa12.71□□□□□ -0.37
CAPN3-202ENST00000337571 FSD1Q9BTV5 496 aa12.71□□□□□ -0.37
CAPN3-202ENST00000337571 FBXO28Q9NVF7 368 aa12.71□□□□□ -0.37
CAPN3-202ENST00000337571 NYAP2Q9P242 653 aa12.71□□□□□ -0.37
CAPN3-202ENST00000337571 PPP1R9AQ9ULJ8 1098 aa12.71□□□□□ -0.37
CAPN3-202ENST00000337571 PCDHB15Q9Y5E8 787 aa12.71□□□□□ -0.37
CAPN3-202ENST00000337571 TRIOBPQ9H2D6 2365 aa12.71□□□□□ -0.38
CAPN3-202ENST00000337571 COL11A1P12107 1806 aaPredicted RBP12.7□□□□□ -0.38
CAPN3-202ENST00000337571 FRMPD3Q5JV73 1810 aa12.7□□□□□ -0.38
CAPN3-202ENST00000337571 ZNF236Q9UL36 1845 aa12.7□□□□□ -0.38
CAPN3-202ENST00000337571 ZBED4O75132 1171 aa12.7□□□□□ -0.38
CAPN3-202ENST00000337571 CYBAP13498 195 aa12.7□□□□□ -0.38
CAPN3-202ENST00000337571 SLC4A3P48751 1232 aa12.7□□□□□ -0.38
CAPN3-202ENST00000337571 ATN1P54259 1190 aaPredicted RBP12.7□□□□□ -0.38
CAPN3-202ENST00000337571 PRAMEF19Q5SWL8 479 aa12.7□□□□□ -0.38
CAPN3-202ENST00000337571 GJC2Q5T442 439 aaPredicted RBP12.7□□□□□ -0.38
CAPN3-202ENST00000337571 ANO1Q5XXA6 986 aa12.7□□□□□ -0.38
CAPN3-202ENST00000337571 IFNL3Q8IZI9 196 aa12.7□□□□□ -0.38
CAPN3-202ENST00000337571 TRPV1Q8NER1 839 aa12.7□□□□□ -0.38
CAPN3-202ENST00000337571 DDX11Q96FC9 970 aa12.7□□□□□ -0.38
CAPN3-202ENST00000337571 SLF1Q9BQI6 1058 aa12.7□□□□□ -0.38
CAPN3-202ENST00000337571 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.7□□□□□ -0.38
CAPN3-202ENST00000337571 A0A0G2JMZ2 1700 aa12.7□□□□□ -0.38
CAPN3-202ENST00000337571 PARP14Q460N5 1801 aa12.69□□□□□ -0.38
CAPN3-202ENST00000337571 M0R2C6 588 aa12.69□□□□□ -0.38
CAPN3-202ENST00000337571 GABBR2O75899 941 aa12.69□□□□□ -0.38
CAPN3-202ENST00000337571 TSPY3P0CV98 308 aa12.69□□□□□ -0.38
CAPN3-202ENST00000337571 TSPY8P0CW00 308 aa12.69□□□□□ -0.38
CAPN3-202ENST00000337571 MX1P20591 662 aa12.69□□□□□ -0.38
CAPN3-202ENST00000337571 ANKRD45Q5TZF3 282 aa12.69□□□□□ -0.38
CAPN3-202ENST00000337571 TDHQ8IZJ6 230 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms