RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 ARHGEF10LQ9HCE6 1279 aa15.23■□□□□ 0.03
RTN4-202ENST00000337526 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.23■□□□□ 0.032e-17■■□□□ 11.9
RTN4-202ENST00000337526 STK24Q9Y6E0 443 aa15.23■□□□□ 0.03
RTN4-202ENST00000337526 MAST3O60307 1309 aa15.22■□□□□ 0.03
RTN4-202ENST00000337526 HGSO14964 777 aaPredicted RBP15.22■□□□□ 0.03
RTN4-202ENST00000337526 BCRP11274 1271 aa15.22■□□□□ 0.03
RTN4-202ENST00000337526 TCP1P17987 556 aaKnown RBP15.22■□□□□ 0.03
RTN4-202ENST00000337526 NECTIN1Q15223 517 aa15.22■□□□□ 0.03
RTN4-202ENST00000337526 MRRFQ96E11 262 aaKnown RBP15.22■□□□□ 0.03
RTN4-202ENST00000337526 CASP14P31944 242 aa15.22■□□□□ 0.03
RTN4-202ENST00000337526 CDC23Q9UJX2 597 aa15.22■□□□□ 0.03
RTN4-202ENST00000337526 AGTPBP1Q9UPW5 1226 aa15.22■□□□□ 0.03
RTN4-202ENST00000337526 HYOU1Q9Y4L1 999 aa15.22■□□□□ 0.03
RTN4-202ENST00000337526 MED23Q9ULK4 1368 aa15.22■□□□□ 0.03
RTN4-202ENST00000337526 ZCCHC11Q5TAX3 1644 aaKnown RBP15.22■□□□□ 0.03
RTN4-202ENST00000337526 STAT1P42224 750 aa15.22■□□□□ 0.03
RTN4-202ENST00000337526 MTMR3Q13615 1198 aa15.22■□□□□ 0.03
RTN4-202ENST00000337526 NAA25Q14CX7 972 aa15.22■□□□□ 0.03
RTN4-202ENST00000337526 USH1GQ495M9 461 aa15.22■□□□□ 0.03
RTN4-202ENST00000337526 PNMA8AQ86V59 439 aaPredicted RBP15.22■□□□□ 0.03
RTN4-202ENST00000337526 PPFIBP2Q8ND30 876 aa15.22■□□□□ 0.03
RTN4-202ENST00000337526 JDP2Q8WYK2 163 aa15.22■□□□□ 0.03
RTN4-202ENST00000337526 MAK16Q9BXY0 300 aaKnown RBP15.22■□□□□ 0.03
RTN4-202ENST00000337526 GREM2Q9H772 168 aa15.22■□□□□ 0.03
RTN4-202ENST00000337526 FAM169AQ9Y6X4 670 aa15.22■□□□□ 0.03
RTN4-202ENST00000337526 RIMBP3CA6NJZ7 1639 aa15.22■□□□□ 0.03
RTN4-202ENST00000337526 RIMBP3BA6NNM3 1639 aa15.22■□□□□ 0.03
RTN4-202ENST00000337526 RIMBP3Q9UFD9 1639 aa15.22■□□□□ 0.03
RTN4-202ENST00000337526 ADGBQ8N7X0 1667 aa15.22■□□□□ 0.03
RTN4-202ENST00000337526 KLRF2D3W0D1 207 aa15.21■□□□□ 0.03
RTN4-202ENST00000337526 GNA14O95837 355 aa15.21■□□□□ 0.03
RTN4-202ENST00000337526 CFBP00751 764 aa15.21■□□□□ 0.03
RTN4-202ENST00000337526 RPN1P04843 607 aaKnown RBP15.21■□□□□ 0.03
RTN4-202ENST00000337526 GUCY2FP51841 1108 aa15.21■□□□□ 0.03
RTN4-202ENST00000337526 NCBP1Q09161 790 aaKnown RBP15.21■□□□□ 0.03
RTN4-202ENST00000337526 PCDHA12Q9UN75 941 aa15.21■□□□□ 0.03
RTN4-202ENST00000337526 XRCC5P13010 732 aaKnown RBP15.21■□□□□ 0.03
RTN4-202ENST00000337526 ZYXQ15942 572 aaKnown RBP15.21■□□□□ 0.03
RTN4-202ENST00000337526 ARHGAP44Q17R89 818 aa15.21■□□□□ 0.03
RTN4-202ENST00000337526 LIN9Q5TKA1 542 aa15.21■□□□□ 0.03
RTN4-202ENST00000337526 CEP128Q6ZU80 1094 aa15.21■□□□□ 0.03
RTN4-202ENST00000337526 TAOK1Q7L7X3 1001 aa15.21■□□□□ 0.03
RTN4-202ENST00000337526 ATP8A2Q9NTI2 1148 aa15.21■□□□□ 0.03
RTN4-202ENST00000337526 EXOC7Q9UPT5 735 aa15.21■□□□□ 0.03
RTN4-202ENST00000337526 E7EVH7 732 aa15.21■□□□□ 0.03
RTN4-202ENST00000337526 OR52Z1P0C646 297 aa15.21■□□□□ 0.03
RTN4-202ENST00000337526 RDH13Q8NBN7 331 aa15.21■□□□□ 0.03
RTN4-202ENST00000337526 SPATA24Q86W54 205 aa15.21■□□□□ 0.02
RTN4-202ENST00000337526 METP08581 1390 aa15.2■□□□□ 0.02
RTN4-202ENST00000337526 A0A1B0GUA9 196 aa15.2■□□□□ 0.02
RTN4-202ENST00000337526 CCDC160A6NGH7 325 aa15.2■□□□□ 0.02
RTN4-202ENST00000337526 KIF23Q02241 960 aaPredicted RBP15.2■□□□□ 0.02
RTN4-202ENST00000337526 NEK8Q86SG6 692 aa15.2■□□□□ 0.02
RTN4-202ENST00000337526 VSIG1Q86XK7 387 aa15.2■□□□□ 0.02
RTN4-202ENST00000337526 PI4K2BQ8TCG2 481 aa15.2■□□□□ 0.02
RTN4-202ENST00000337526 TBC1D22AQ8WUA7 517 aa15.2■□□□□ 0.02
RTN4-202ENST00000337526 GPKOWQ92917 476 aaPredicted RBP eCLIP15.2■□□□□ 0.02
RTN4-202ENST00000337526 LSM14BQ9BX40 385 aaKnown RBP15.2■□□□□ 0.02
RTN4-202ENST00000337526 FOXP1Q9H334 677 aaPredicted RBP15.2■□□□□ 0.02
RTN4-202ENST00000337526 ARMCX3Q9UH62 379 aaPredicted RBP15.2■□□□□ 0.02
RTN4-202ENST00000337526 PRAMEF22A3QJZ6 481 aa15.2■□□□□ 0.02
RTN4-202ENST00000337526 KCNK3O14649 394 aa15.2■□□□□ 0.02
RTN4-202ENST00000337526 COPB1P53618 953 aaKnown RBP15.2■□□□□ 0.02
RTN4-202ENST00000337526 TCP10Q12799 353 aa15.2■□□□□ 0.02
RTN4-202ENST00000337526 ANKRD13CQ8N6S4 541 aa15.2■□□□□ 0.02
RTN4-202ENST00000337526 AMFRQ9UKV5 643 aa15.2■□□□□ 0.02
RTN4-202ENST00000337526 DDX39AO00148 427 aaKnown RBP15.2■□□□□ 0.02
RTN4-202ENST00000337526 CIAO1O76071 339 aa15.2■□□□□ 0.02
RTN4-202ENST00000337526 ARL1P40616 181 aaPredicted RBP15.2■□□□□ 0.02
RTN4-202ENST00000337526 SF3A3Q12874 501 aaKnown RBP eCLIP15.2■□□□□ 0.02
RTN4-202ENST00000337526 SRGAP1Q7Z6B7 1085 aa15.2■□□□□ 0.02
RTN4-202ENST00000337526 ZNF354CQ86Y25 554 aa15.2■□□□□ 0.02
RTN4-202ENST00000337526 SASH1O94885 1247 aa15.2■□□□□ 0.02
RTN4-202ENST00000337526 SLC39A2Q9NP94 309 aa15.2■□□□□ 0.02
RTN4-202ENST00000337526 PPANQ9NQ55 473 aaKnown RBP15.2■□□□□ 0.02
RTN4-202ENST00000337526 CTNNA1P35221 906 aaKnown RBP15.19■□□□□ 0.02
RTN4-202ENST00000337526 LONP1P36776 959 aaKnown RBP15.19■□□□□ 0.02
RTN4-202ENST00000337526 GOLGA8FQ08AF8 430 aa15.19■□□□□ 0.02
RTN4-202ENST00000337526 GOLGA8DPQ0D2H9 430 aa15.19■□□□□ 0.02
RTN4-202ENST00000337526 U2AF1L4Q8WU68 220 aaKnown RBP15.19■□□□□ 0.02
RTN4-202ENST00000337526 RAB17Q9H0T7 212 aa15.19■□□□□ 0.02
RTN4-202ENST00000337526 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.19■□□□□ 0.02
RTN4-202ENST00000337526 BUB1O43683 1085 aa15.19■□□□□ 0.02
RTN4-202ENST00000337526 ABCB4P21439 1286 aa15.19■□□□□ 0.02
RTN4-202ENST00000337526 GNGT1P63211 74 aa15.19■□□□□ 0.02
RTN4-202ENST00000337526 IRX5P78411 483 aaPredicted RBP15.19■□□□□ 0.02
RTN4-202ENST00000337526 CEP85LQ5SZL2 805 aa15.19■□□□□ 0.02
RTN4-202ENST00000337526 GPBP1Q86WP2 473 aa15.19■□□□□ 0.02
RTN4-202ENST00000337526 CPXCR1Q8N123 301 aa15.19■□□□□ 0.02
RTN4-202ENST00000337526 RNF26Q9BY78 433 aaPredicted RBP15.19■□□□□ 0.02
RTN4-202ENST00000337526 MED4Q9NPJ6 270 aa15.19■□□□□ 0.02
RTN4-202ENST00000337526 GOLGA8HP0CJ92 632 aa15.19■□□□□ 0.02
RTN4-202ENST00000337526 ATP11AP98196 1134 aa15.19■□□□□ 0.02
RTN4-202ENST00000337526 CLUL1Q15846 466 aa15.19■□□□□ 0.02
RTN4-202ENST00000337526 PTPN21Q16825 1174 aa15.19■□□□□ 0.02
RTN4-202ENST00000337526 MFSD14BQ5SR56 506 aa15.19■□□□□ 0.02
RTN4-202ENST00000337526 SLC35F6Q8N357 371 aa15.19■□□□□ 0.02
RTN4-202ENST00000337526 BCAS4Q8TDM0 211 aa15.19■□□□□ 0.02
RTN4-202ENST00000337526 STMN2Q93045 179 aa15.19■□□□□ 0.02
RTN4-202ENST00000337526 PPFIA4O75335 1185 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms