RNA–Protein interactions for RNA: ENST00000336328.10

CMTM1-204, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-204ENST00000336328 LHX8Q68G74 356 aa21.15■□□□□ 0.98
CMTM1-204ENST00000336328 DIS3LQ8TF46 1054 aaKnown RBP21.15■□□□□ 0.98
CMTM1-204ENST00000336328 NAPBQ9H115 298 aa21.15■□□□□ 0.98
CMTM1-204ENST00000336328 SYNPO2Q9UMS6 1093 aa21.15■□□□□ 0.98
CMTM1-204ENST00000336328 TRIOBPQ9H2D6 2365 aa21.14■□□□□ 0.97
CMTM1-204ENST00000336328 STAT3P40763 770 aa21.14■□□□□ 0.97
CMTM1-204ENST00000336328 STK11IPQ8N1F8 1099 aa21.14■□□□□ 0.97
CMTM1-204ENST00000336328 NPLOC4Q8TAT6 608 aa21.14■□□□□ 0.97
CMTM1-204ENST00000336328 MKL1Q969V6 931 aa21.14■□□□□ 0.97
CMTM1-204ENST00000336328 EVI5LQ96CN4 794 aa21.14■□□□□ 0.97
CMTM1-204ENST00000336328 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.14■□□□□ 0.97
CMTM1-204ENST00000336328 PPP1R9AQ9ULJ8 1098 aa21.14■□□□□ 0.97
CMTM1-204ENST00000336328 RLFQ13129 1914 aa21.14■□□□□ 0.97
CMTM1-204ENST00000336328 F5H6K3 240 aa21.13■□□□□ 0.97
CMTM1-204ENST00000336328 VWA5AO00534 786 aa21.13■□□□□ 0.97
CMTM1-204ENST00000336328 KLRC3Q07444 240 aa21.13■□□□□ 0.97
CMTM1-204ENST00000336328 TMEM132BQ14DG7 1078 aa21.13■□□□□ 0.97
CMTM1-204ENST00000336328 FAM83BQ5T0W9 1011 aa21.13■□□□□ 0.97
CMTM1-204ENST00000336328 RIOX2Q8IUF8 465 aa21.13■□□□□ 0.97
CMTM1-204ENST00000336328 OTUD7AQ8TE49 926 aaPredicted RBP21.13■□□□□ 0.97
CMTM1-204ENST00000336328 RWDD1Q9H446 243 aaPredicted RBP21.13■□□□□ 0.97
CMTM1-204ENST00000336328 FLRT1Q9NZU1 646 aa21.13■□□□□ 0.97
CMTM1-204ENST00000336328 CLIP2Q9UDT6 1046 aa21.13■□□□□ 0.97
CMTM1-204ENST00000336328 STAP2Q9UGK3 403 aa21.13■□□□□ 0.97
CMTM1-204ENST00000336328 DDX20Q9UHI6 824 aaKnown RBP21.13■□□□□ 0.97
CMTM1-204ENST00000336328 CTDP1Q9Y5B0 961 aaPredicted RBP21.13■□□□□ 0.97
CMTM1-204ENST00000336328 A0A1W2PPC1 479 aa21.12■□□□□ 0.97
CMTM1-204ENST00000336328 MNX1P50219 401 aaPredicted RBP21.12■□□□□ 0.97
CMTM1-204ENST00000336328 FXR1P51114 621 aaKnown RBP eCLIP21.12■□□□□ 0.97
CMTM1-204ENST00000336328 PRPF38AQ8NAV1 312 aaKnown RBP21.12■□□□□ 0.97
CMTM1-204ENST00000336328 EPB41L4AQ9HCS5 686 aaPredicted RBP21.12■□□□□ 0.97
CMTM1-204ENST00000336328 TTLL1O95922 423 aa21.11■□□□□ 0.97
CMTM1-204ENST00000336328 TSPY3P0CV98 308 aa21.11■□□□□ 0.97
CMTM1-204ENST00000336328 TSPY8P0CW00 308 aa21.11■□□□□ 0.97
CMTM1-204ENST00000336328 CYP2C19P33261 490 aa21.11■□□□□ 0.97
CMTM1-204ENST00000336328 KCTD2Q14681 263 aa21.11■□□□□ 0.97
CMTM1-204ENST00000336328 ARRDC4Q8NCT1 418 aa21.11■□□□□ 0.97
CMTM1-204ENST00000336328 SEC62Q99442 399 aaKnown RBP21.11■□□□□ 0.97
CMTM1-204ENST00000336328 SLF1Q9BQI6 1058 aa21.11■□□□□ 0.97
CMTM1-204ENST00000336328 MTMR4Q9NYA4 1195 aa21.11■□□□□ 0.97
CMTM1-204ENST00000336328 RBM27Q9P2N5 1060 aaKnown RBP21.11■□□□□ 0.97
CMTM1-204ENST00000336328 DIS3Q9Y2L1 958 aaKnown RBP21.11■□□□□ 0.97
CMTM1-204ENST00000336328 ZNFX1Q9P2E3 1918 aaKnown RBP21.1■□□□□ 0.97
CMTM1-204ENST00000336328 COBLO75128 1261 aa21.1■□□□□ 0.97
CMTM1-204ENST00000336328 IGHA2P01877 340 aa21.1■□□□□ 0.97
CMTM1-204ENST00000336328 PDE1AP54750 535 aa21.1■□□□□ 0.97
CMTM1-204ENST00000336328 PPARAQ07869 468 aa21.1■□□□□ 0.97
CMTM1-204ENST00000336328 NEDD1Q8NHV4 660 aa21.1■□□□□ 0.97
CMTM1-204ENST00000336328 YTHDC1Q96MU7 727 aaKnown RBP21.1■□□□□ 0.97
CMTM1-204ENST00000336328 MMP19Q99542 508 aa21.1■□□□□ 0.97
CMTM1-204ENST00000336328 HELLSQ9NRZ9 838 aa21.1■□□□□ 0.97
CMTM1-204ENST00000336328 FBXO28Q9NVF7 368 aa21.1■□□□□ 0.97
CMTM1-204ENST00000336328 SALL3Q9BXA9 1300 aa21.09■□□□□ 0.97
CMTM1-204ENST00000336328 IGKV6D-41A0A0C4DH26 115 aa21.09■□□□□ 0.97
CMTM1-204ENST00000336328 ZBED4O75132 1171 aa21.09■□□□□ 0.97
CMTM1-204ENST00000336328 PRDM1O75626 825 aa21.09■□□□□ 0.97
CMTM1-204ENST00000336328 FDX1P10109 184 aa21.09■□□□□ 0.97
CMTM1-204ENST00000336328 COL6A1P12109 1028 aa21.09■□□□□ 0.97
CMTM1-204ENST00000336328 C7orf61Q8IZ16 206 aa21.09■□□□□ 0.97
CMTM1-204ENST00000336328 NRBP1Q9UHY1 535 aa21.09■□□□□ 0.97
CMTM1-204ENST00000336328 FEM1BQ9UK73 627 aa21.09■□□□□ 0.97
CMTM1-204ENST00000336328 A0A0G2JMZ2 1700 aa21.08■□□□□ 0.97
CMTM1-204ENST00000336328 NDUFB10O96000 172 aa21.08■□□□□ 0.97
CMTM1-204ENST00000336328 TFAP4Q01664 338 aa21.08■□□□□ 0.97
CMTM1-204ENST00000336328 GMCL1P1Q8NEA9 526 aa21.08■□□□□ 0.97
CMTM1-204ENST00000336328 CEP95Q96GE4 821 aa21.08■□□□□ 0.97
CMTM1-204ENST00000336328 TEX13BQ9BXU2 312 aa21.08■□□□□ 0.97
CMTM1-204ENST00000336328 PRO3102Q9H379 93 aa21.08■□□□□ 0.97
CMTM1-204ENST00000336328 ZNF236Q9UL36 1845 aa21.08■□□□□ 0.96
CMTM1-204ENST00000336328 ATP2A1O14983 1001 aa21.07■□□□□ 0.96
CMTM1-204ENST00000336328 SEPT4O43236 478 aa21.07■□□□□ 0.96
CMTM1-204ENST00000336328 CYBAP13498 195 aa21.07■□□□□ 0.96
CMTM1-204ENST00000336328 BMP8BP34820 402 aa21.07■□□□□ 0.96
CMTM1-204ENST00000336328 MAML3Q96JK9 1138 aa21.07■□□□□ 0.96
CMTM1-204ENST00000336328 ZNF214Q9UL59 606 aaPredicted RBP21.07■□□□□ 0.96
CMTM1-204ENST00000336328 GREB1LQ9C091 1923 aaPredicted RBP21.07■□□□□ 0.96
CMTM1-204ENST00000336328 PARP14Q460N5 1801 aa21.06■□□□□ 0.96
CMTM1-204ENST00000336328 DNM1LO00429 736 aa21.06■□□□□ 0.96
CMTM1-204ENST00000336328 DDX11Q96FC9 970 aa21.06■□□□□ 0.96
CMTM1-204ENST00000336328 SENP6Q9GZR1 1112 aaPredicted RBP21.06■□□□□ 0.96
CMTM1-204ENST00000336328 PFASO15067 1338 aa21.05■□□□□ 0.96
CMTM1-204ENST00000336328 ALX1Q15699 326 aa21.05■□□□□ 0.96
CMTM1-204ENST00000336328 MCMDC2Q4G0Z9 681 aa21.05■□□□□ 0.96
CMTM1-204ENST00000336328 SLFN13Q68D06 897 aa21.05■□□□□ 0.96
CMTM1-204ENST00000336328 MSL3Q8N5Y2 521 aaKnown RBP21.05■□□□□ 0.96
CMTM1-204ENST00000336328 TRPV1Q8NER1 839 aa21.05■□□□□ 0.96
CMTM1-204ENST00000336328 REPS2Q8NFH8 660 aa21.05■□□□□ 0.96
CMTM1-204ENST00000336328 CHURC1Q8WUH1 139 aa21.05■□□□□ 0.96
CMTM1-204ENST00000336328 NUP88Q99567 741 aaPredicted RBP21.05■□□□□ 0.96
CMTM1-204ENST00000336328 FBXO40Q9UH90 709 aa21.05■□□□□ 0.96
CMTM1-204ENST00000336328 PLIN4Q96Q06 1357 aa21.05■□□□□ 0.96
CMTM1-204ENST00000336328 MYH4Q9Y623 1939 aa21.05■□□□□ 0.96
CMTM1-204ENST00000336328 COL11A1P12107 1806 aaPredicted RBP21.04■□□□□ 0.96
CMTM1-204ENST00000336328 TSPY2A6NKD2 308 aa21.04■□□□□ 0.96
CMTM1-204ENST00000336328 KBTBD13C9JR72 458 aa21.04■□□□□ 0.96
CMTM1-204ENST00000336328 BMP3P12645 472 aa21.04■□□□□ 0.96
CMTM1-204ENST00000336328 OAZ1P54368 228 aa21.04■□□□□ 0.96
CMTM1-204ENST00000336328 SNRNP48Q6IEG0 339 aaKnown RBP21.04■□□□□ 0.96
CMTM1-204ENST00000336328 KIFC2Q96AC6 838 aa21.04■□□□□ 0.96
CMTM1-204ENST00000336328 TINF2Q9BSI4 451 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms