RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 NCBP1Q09161 790 aaKnown RBP6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 DRP2Q13474 957 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 CCDC153Q494R4 210 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 C6orf118Q5T5N4 469 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 ANKRD2Q9GZV1 360 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 CARD9Q9H257 536 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 DHX57Q6P158 1386 aaKnown RBP6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 KRT19P08727 400 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 MRPL12P52815 198 aaKnown RBP6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 SNX1Q13596 522 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 STAMQ92783 540 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 OMA1Q96E52 524 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 NKIRAS1Q9NYS0 192 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 SPDYE4A6NLX3 237 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 SNUPNO95149 360 aaKnown RBP6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 ADSLP30566 484 aaPredicted RBP6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 KBTBD12Q3ZCT8 623 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 ANO1Q5XXA6 986 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 LSM14AQ8ND56 463 aaKnown RBP6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 SART1O43290 800 aaKnown RBP6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 SRGAP3O43295 1099 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 MYO1BO43795 1136 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 TRPC1P48995 793 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 RUBCNQ92622 972 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 PYM1Q9BRP8 204 aaKnown RBP6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 ZNF839A8K0R7 811 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 SNX2O60749 519 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 GSTA2P09210 222 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 KRT83P78385 493 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 SND1Q7KZF4 910 aaKnown RBP eCLIP6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 SH3BP5LQ7L8J4 393 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 ARHGAP22Q7Z5H3 698 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 CDH24Q86UP0 819 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 PROCA1Q8NCQ7 364 aaPredicted RBP6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 LBHD1Q9BQE6 289 aaPredicted RBP6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 TMOD3Q9NYL9 352 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 LIMA1Q9UHB6 759 aaKnown RBP6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 PDE6AP16499 860 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 SLC8A3P57103 927 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 HHATQ5VTY9 493 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 NUGGCQ68CJ6 796 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 TAGAPQ8N103 731 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 OTULINQ96BN8 352 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 TUBA1CQ9BQE3 449 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 CD209Q9NNX6 404 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 BIRC5O15392 142 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 SPIRE1Q08AE8 756 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 CCDC13Q8IYE1 715 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 VPS52Q8N1B4 723 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 ZKSCAN5Q9Y2L8 839 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 SH3D21A4FU49 640 aa6.65□□□□□ -1.34
CDC42BPA-201ENST00000334218 FGFR1OP2Q9NVK5 253 aa6.65□□□□□ -1.34
CDC42BPA-201ENST00000334218 SETD1BQ9UPS6 1966 aaKnown RBP6.65□□□□□ -1.34
CDC42BPA-201ENST00000334218 RPGRIP1LQ68CZ1 1315 aa6.65□□□□□ -1.34
CDC42BPA-201ENST00000334218 ZBED9Q6R2W3 1325 aa6.65□□□□□ -1.34
CDC42BPA-201ENST00000334218 LCP1P13796 627 aa6.65□□□□□ -1.34
CDC42BPA-201ENST00000334218 FGFR2P21802 821 aa6.65□□□□□ -1.34
CDC42BPA-201ENST00000334218 BNC1Q01954 994 aa6.65□□□□□ -1.34
CDC42BPA-201ENST00000334218 FAAH2Q6GMR7 532 aa6.65□□□□□ -1.34
CDC42BPA-201ENST00000334218 C4orf50Q6ZRC1 276 aa6.65□□□□□ -1.34
CDC42BPA-201ENST00000334218 TDRD7Q8NHU6 1098 aaKnown RBP6.65□□□□□ -1.34
CDC42BPA-201ENST00000334218 GABPB2Q8TAK5 448 aaPredicted RBP6.65□□□□□ -1.34
CDC42BPA-201ENST00000334218 NLRP7Q8WX94 980 aa6.65□□□□□ -1.34
CDC42BPA-201ENST00000334218 FGD4Q96M96 766 aa6.65□□□□□ -1.34
CDC42BPA-201ENST00000334218 STXBP3O00186 592 aa6.65□□□□□ -1.34
CDC42BPA-201ENST00000334218 RIOK3O14730 519 aaKnown RBP6.65□□□□□ -1.34
CDC42BPA-201ENST00000334218 EFCAB14O75071 495 aa6.65□□□□□ -1.34
CDC42BPA-201ENST00000334218 GRIN1Q05586 938 aa6.65□□□□□ -1.34
CDC42BPA-201ENST00000334218 PPP2R5EQ16537 467 aa6.65□□□□□ -1.34
CDC42BPA-201ENST00000334218 SMC5Q8IY18 1101 aa6.65□□□□□ -1.34
CDC42BPA-201ENST00000334218 ZWILCHQ9H900 591 aa6.65□□□□□ -1.34
CDC42BPA-201ENST00000334218 CCDC144AA2RUR9 1427 aa6.65□□□□□ -1.34
CDC42BPA-201ENST00000334218 PLS3P13797 630 aa6.65□□□□□ -1.34
CDC42BPA-201ENST00000334218 SERPINB8P50452 374 aa6.65□□□□□ -1.34
CDC42BPA-201ENST00000334218 TOMM20Q15388 145 aa6.65□□□□□ -1.34
CDC42BPA-201ENST00000334218 MTA3Q9BTC8 594 aa6.65□□□□□ -1.34
CDC42BPA-201ENST00000334218 DKC1O60832 514 aaKnown RBP eCLIP6.65□□□□□ -1.35
CDC42BPA-201ENST00000334218 NBNO60934 754 aa6.65□□□□□ -1.35
CDC42BPA-201ENST00000334218 RASSF9O75901 435 aa6.65□□□□□ -1.35
CDC42BPA-201ENST00000334218 NPR1P16066 1061 aa6.65□□□□□ -1.35
CDC42BPA-201ENST00000334218 SERPINB1P30740 379 aa6.65□□□□□ -1.35
CDC42BPA-201ENST00000334218 KRT85P78386 507 aa6.65□□□□□ -1.35
CDC42BPA-201ENST00000334218 MAP3K11Q16584 847 aa6.65□□□□□ -1.35
CDC42BPA-201ENST00000334218 TEX19Q8NA77 164 aa6.65□□□□□ -1.35
CDC42BPA-201ENST00000334218 DYDC2Q96IM9 177 aa6.65□□□□□ -1.35
CDC42BPA-201ENST00000334218 FYCO1Q9BQS8 1478 aa6.65□□□□□ -1.35
CDC42BPA-201ENST00000334218 ECEL1O95672 775 aa6.65□□□□□ -1.35
CDC42BPA-201ENST00000334218 MTMR3Q13615 1198 aa6.65□□□□□ -1.35
CDC42BPA-201ENST00000334218 NBPF15Q8N660 670 aa6.65□□□□□ -1.35
CDC42BPA-201ENST00000334218 UTP11Q9Y3A2 253 aaKnown RBP6.65□□□□□ -1.35
CDC42BPA-201ENST00000334218 ZNF330Q9Y3S2 320 aaPredicted RBP6.65□□□□□ -1.35
CDC42BPA-201ENST00000334218 SYCE3A1L190 88 aa6.65□□□□□ -1.35
CDC42BPA-201ENST00000334218 RAPGEF3O95398 923 aa6.65□□□□□ -1.35
CDC42BPA-201ENST00000334218 PDE6CP51160 858 aa6.65□□□□□ -1.35
CDC42BPA-201ENST00000334218 ZBTB40Q9NUA8 1239 aa6.65□□□□□ -1.35
CDC42BPA-201ENST00000334218 HOXA2O43364 376 aa6.65□□□□□ -1.35
CDC42BPA-201ENST00000334218 SNAPC5O75971 98 aa6.65□□□□□ -1.35
CDC42BPA-201ENST00000334218 SSTP61278 116 aa6.65□□□□□ -1.35
CDC42BPA-201ENST00000334218 YWHAEP62258 255 aaKnown RBP6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms