RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 USP17L19D6RCP7 530 aa10.27□□□□□ -0.77
COPB2-201ENST00000333188 USP17L20D6RJB6 530 aa10.27□□□□□ -0.77
COPB2-201ENST00000333188 CYTH3O43739 400 aa10.27□□□□□ -0.77
COPB2-201ENST00000333188 ONECUT3O60422 494 aaPredicted RBP10.27□□□□□ -0.77
COPB2-201ENST00000333188 DPEP1P16444 411 aa10.27□□□□□ -0.77
COPB2-201ENST00000333188 STAT6P42226 847 aa10.27□□□□□ -0.77
COPB2-201ENST00000333188 USP17L24Q0WX57 530 aa10.27□□□□□ -0.77
COPB2-201ENST00000333188 NOLC1Q14978 699 aaKnown RBP eCLIP10.27□□□□□ -0.778e-8■□□□□ 8.7
COPB2-201ENST00000333188 POSTNQ15063 836 aa10.27□□□□□ -0.77
COPB2-201ENST00000333188 CCDC144BQ3MJ40 725 aa10.27□□□□□ -0.77
COPB2-201ENST00000333188 CRY2Q49AN0 593 aa10.27□□□□□ -0.77
COPB2-201ENST00000333188 CCDC178Q5BJE1 867 aa10.27□□□□□ -0.77
COPB2-201ENST00000333188 RRAGBQ5VZM2 374 aa10.27□□□□□ -0.77
COPB2-201ENST00000333188 CCDC174Q6PII3 467 aa10.27□□□□□ -0.77
COPB2-201ENST00000333188 USP17L6PQ6QN14 398 aa10.27□□□□□ -0.77
COPB2-201ENST00000333188 KRBA2Q6ZNG9 492 aa10.27□□□□□ -0.77
COPB2-201ENST00000333188 DYMQ7RTS9 669 aa10.27□□□□□ -0.77
COPB2-201ENST00000333188 CCDC34Q96HJ3 373 aa10.27□□□□□ -0.77
COPB2-201ENST00000333188 FAM205AQ6ZU69 1335 aa10.27□□□□□ -0.77
COPB2-201ENST00000333188 USP17L10C9JJH3 530 aa10.26□□□□□ -0.77
COPB2-201ENST00000333188 PRPF3O43395 683 aaKnown RBP10.26□□□□□ -0.77
COPB2-201ENST00000333188 CUTAO60888 179 aa10.26□□□□□ -0.77
COPB2-201ENST00000333188 GH2P01242 217 aa10.26□□□□□ -0.77
COPB2-201ENST00000333188 TXLNAP40222 546 aa10.26□□□□□ -0.77
COPB2-201ENST00000333188 CDAN1Q8IWY9 1227 aa10.26□□□□□ -0.77
COPB2-201ENST00000333188 CPXCR1Q8N123 301 aa10.26□□□□□ -0.77
COPB2-201ENST00000333188 ENGASEQ8NFI3 743 aa10.26□□□□□ -0.77
COPB2-201ENST00000333188 FUCA2Q9BTY2 467 aa10.26□□□□□ -0.77
COPB2-201ENST00000333188 TBC1D7Q9P0N9 293 aa10.26□□□□□ -0.77
COPB2-201ENST00000333188 GPR75-ASB3A0A0A6YYF3 556 aa10.26□□□□□ -0.77
COPB2-201ENST00000333188 SHTN1A0MZ66 631 aa10.26□□□□□ -0.77
COPB2-201ENST00000333188 RHBDL3P58872 404 aa10.26□□□□□ -0.77
COPB2-201ENST00000333188 UVSSAQ2YD98 709 aa10.26□□□□□ -0.77
COPB2-201ENST00000333188 DTHD1Q6ZMT9 781 aa10.26□□□□□ -0.77
COPB2-201ENST00000333188 FOXP1Q9H334 677 aaPredicted RBP10.26□□□□□ -0.77
COPB2-201ENST00000333188 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.26□□□□□ -0.77
COPB2-201ENST00000333188 V9GYY5 206 aaPredicted RBP10.26□□□□□ -0.77
COPB2-201ENST00000333188 BAZ2AQ9UIF9 1905 aaKnown RBP10.26□□□□□ -0.77
COPB2-201ENST00000333188 DDAH1O94760 285 aa10.26□□□□□ -0.77
COPB2-201ENST00000333188 SKILP12757 684 aa10.26□□□□□ -0.77
COPB2-201ENST00000333188 U2AF2P26368 475 aaKnown RBP eCLIP10.26□□□□□ -0.778e-9■■■□□ 14.8
COPB2-201ENST00000333188 HOXA13P31271 388 aaPredicted RBP10.26□□□□□ -0.77
COPB2-201ENST00000333188 CACNB1Q02641 598 aaPredicted RBP10.26□□□□□ -0.77
COPB2-201ENST00000333188 PTPAQ15257 358 aa10.26□□□□□ -0.77
COPB2-201ENST00000333188 METTL16Q86W50 562 aaKnown RBP10.26□□□□□ -0.77
COPB2-201ENST00000333188 FOXP4Q8IVH2 680 aaPredicted RBP10.26□□□□□ -0.77
COPB2-201ENST00000333188 NFE2L3Q9Y4A8 694 aa10.26□□□□□ -0.77
COPB2-201ENST00000333188 CNTNAP5Q8WYK1 1306 aa10.26□□□□□ -0.77
COPB2-201ENST00000333188 DLGAP5Q15398 846 aa10.25□□□□□ -0.77
COPB2-201ENST00000333188 CCAR2Q8N163 923 aaKnown RBP10.25□□□□□ -0.77
COPB2-201ENST00000333188 TTLL6Q8N841 843 aa10.25□□□□□ -0.77
COPB2-201ENST00000333188 HPS3Q969F9 1004 aa10.25□□□□□ -0.77
COPB2-201ENST00000333188 CNKSR1Q969H4 720 aa10.25□□□□□ -0.77
COPB2-201ENST00000333188 KIFC2Q96AC6 838 aa10.25□□□□□ -0.77
COPB2-201ENST00000333188 TMEM60Q9H2L4 133 aa10.25□□□□□ -0.77
COPB2-201ENST00000333188 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.25□□□□□ -0.77
COPB2-201ENST00000333188 SORBS3O60504 671 aa10.25□□□□□ -0.77
COPB2-201ENST00000333188 ZNF76P36508 570 aa10.25□□□□□ -0.77
COPB2-201ENST00000333188 TBCKQ8TEA7 893 aa10.25□□□□□ -0.77
COPB2-201ENST00000333188 CACTINQ8WUQ7 758 aaKnown RBP10.25□□□□□ -0.77
COPB2-201ENST00000333188 MAP3K14Q99558 947 aa10.25□□□□□ -0.77
COPB2-201ENST00000333188 SAMSN1Q9NSI8 373 aaKnown RBP10.25□□□□□ -0.77
COPB2-201ENST00000333188 UBR2Q8IWV8 1755 aa10.25□□□□□ -0.77
COPB2-201ENST00000333188 TMEM232C9JQI7 657 aa10.25□□□□□ -0.77
COPB2-201ENST00000333188 ORC4O43929 436 aa10.25□□□□□ -0.77
COPB2-201ENST00000333188 TOP1P11387 765 aaKnown RBP10.25□□□□□ -0.77
COPB2-201ENST00000333188 EEF2P13639 858 aaKnown RBP10.25□□□□□ -0.77
COPB2-201ENST00000333188 ICA1Q05084 483 aa10.25□□□□□ -0.77
COPB2-201ENST00000333188 ENOX2Q16206 610 aaKnown RBP10.25□□□□□ -0.77
COPB2-201ENST00000333188 JDP2Q8WYK2 163 aa10.25□□□□□ -0.77
COPB2-201ENST00000333188 C6orf50Q9HD87 102 aa10.25□□□□□ -0.77
COPB2-201ENST00000333188 MAD2L2Q9UI95 211 aa10.25□□□□□ -0.77
COPB2-201ENST00000333188 ANAPC4Q9UJX5 808 aa10.25□□□□□ -0.77
COPB2-201ENST00000333188 UQCRHLA0A096LP55 91 aa10.24□□□□□ -0.77
COPB2-201ENST00000333188 CHMP2AO43633 222 aa10.24□□□□□ -0.77
COPB2-201ENST00000333188 UQCRHP07919 91 aa10.24□□□□□ -0.77
COPB2-201ENST00000333188 GNAQP50148 359 aa10.24□□□□□ -0.77
COPB2-201ENST00000333188 PFKFB3Q16875 520 aaPredicted RBP10.24□□□□□ -0.77
COPB2-201ENST00000333188 ATL3Q6DD88 541 aa10.24□□□□□ -0.77
COPB2-201ENST00000333188 DGKHQ86XP1 1220 aa10.24□□□□□ -0.77
COPB2-201ENST00000333188 TMEM39BQ9GZU3 492 aa10.24□□□□□ -0.77
COPB2-201ENST00000333188 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.24□□□□□ -0.773e-7■■■■■ 34.2
COPB2-201ENST00000333188 BMP2KQ9NSY1 1161 aaPredicted RBP10.24□□□□□ -0.77
COPB2-201ENST00000333188 NUP188Q5SRE5 1749 aa10.24□□□□□ -0.77
COPB2-201ENST00000333188 MYH2Q9UKX2 1941 aa10.24□□□□□ -0.77
COPB2-201ENST00000333188 A0A087X0B3 334 aa10.24□□□□□ -0.77
COPB2-201ENST00000333188 A0A1W2PQ27 194 aa10.24□□□□□ -0.77
COPB2-201ENST00000333188 A0A1W2PQ64 194 aa10.24□□□□□ -0.77
COPB2-201ENST00000333188 A0A1W2PQD8 194 aa10.24□□□□□ -0.77
COPB2-201ENST00000333188 IL1R1P14778 569 aa10.24□□□□□ -0.77
COPB2-201ENST00000333188 FANCCQ00597 558 aa10.24□□□□□ -0.77
COPB2-201ENST00000333188 TBC1D10BQ4KMP7 808 aaPredicted RBP10.24□□□□□ -0.77
COPB2-201ENST00000333188 APOBEC3HQ6NTF7 200 aaKnown RBP10.24□□□□□ -0.77
COPB2-201ENST00000333188 REXO1Q8N1G1 1221 aaKnown RBP10.24□□□□□ -0.77
COPB2-201ENST00000333188 FLAD1Q8NFF5 587 aa10.24□□□□□ -0.77
COPB2-201ENST00000333188 DPF2Q92785 391 aa10.24□□□□□ -0.77
COPB2-201ENST00000333188 PDLIM2Q96JY6 352 aa10.24□□□□□ -0.77
COPB2-201ENST00000333188 PHF20Q9BVI0 1012 aa10.24□□□□□ -0.77
COPB2-201ENST00000333188 VPS16Q9H269 839 aa10.24□□□□□ -0.77
COPB2-201ENST00000333188 TCP11L1Q9NUJ3 509 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms