RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 GPKOWQ92917 476 aaPredicted RBP eCLIP24.37■■□□□ 1.49
LIMS2-201ENST00000324938 FAM163AQ96GL9 167 aaPredicted RBP24.37■■□□□ 1.49
LIMS2-201ENST00000324938 CRAMP1Q96RY5 1269 aa24.37■■□□□ 1.49
LIMS2-201ENST00000324938 TRMT1Q9NXH9 659 aaKnown RBP24.37■■□□□ 1.49
LIMS2-201ENST00000324938 FAM205AQ6ZU69 1335 aa24.37■■□□□ 1.49
LIMS2-201ENST00000324938 TMEM232C9JQI7 657 aa24.37■■□□□ 1.49
LIMS2-201ENST00000324938 AFMP43652 599 aa24.37■■□□□ 1.49
LIMS2-201ENST00000324938 DDR1Q08345 913 aa24.37■■□□□ 1.49
LIMS2-201ENST00000324938 TEX11Q8IYF3 940 aa24.37■■□□□ 1.49
LIMS2-201ENST00000324938 CCDC112Q8NEF3 446 aa24.37■■□□□ 1.49
LIMS2-201ENST00000324938 TBC1D16Q8TBP0 767 aa24.37■■□□□ 1.49
LIMS2-201ENST00000324938 MED15Q96RN5 788 aa24.37■■□□□ 1.49
LIMS2-201ENST00000324938 TMEM47Q9BQJ4 181 aa24.37■■□□□ 1.49
LIMS2-201ENST00000324938 PYM1Q9BRP8 204 aaKnown RBP24.37■■□□□ 1.49
LIMS2-201ENST00000324938 KIF2AO00139 706 aaPredicted RBP24.36■■□□□ 1.49
LIMS2-201ENST00000324938 TOP1P11387 765 aaKnown RBP24.36■■□□□ 1.49
LIMS2-201ENST00000324938 MCM7P33993 719 aa24.36■■□□□ 1.49
LIMS2-201ENST00000324938 E2F4Q16254 413 aa24.36■■□□□ 1.49
LIMS2-201ENST00000324938 SLC35G1Q2M3R5 365 aa24.36■■□□□ 1.49
LIMS2-201ENST00000324938 ARL6IP4Q66PJ3 421 aaKnown RBP24.36■■□□□ 1.49
LIMS2-201ENST00000324938 TRMT44Q8IYL2 757 aaKnown RBP24.36■■□□□ 1.49
LIMS2-201ENST00000324938 DAGLBQ8NCG7 672 aa24.36■■□□□ 1.49
LIMS2-201ENST00000324938 TBC1D22AQ8WUA7 517 aa24.36■■□□□ 1.49
LIMS2-201ENST00000324938 GSDMAQ96QA5 445 aa24.36■■□□□ 1.49
LIMS2-201ENST00000324938 POLLQ9UGP5 575 aa24.36■■□□□ 1.49
LIMS2-201ENST00000324938 GAKO14976 1311 aa24.36■■□□□ 1.49
LIMS2-201ENST00000324938 FLT1P17948 1338 aa24.36■■□□□ 1.49
LIMS2-201ENST00000324938 MYH8P13535 1937 aa24.36■■□□□ 1.49
LIMS2-201ENST00000324938 PALM3A6NDB9 673 aaPredicted RBP24.35■■□□□ 1.49
LIMS2-201ENST00000324938 M0R2N6 131 aa24.35■■□□□ 1.49
LIMS2-201ENST00000324938 MFSD14BQ5SR56 506 aa24.35■■□□□ 1.49
LIMS2-201ENST00000324938 SLF2Q8IX21 1173 aa24.35■■□□□ 1.49
LIMS2-201ENST00000324938 CCDC148Q8NFR7 591 aa24.35■■□□□ 1.49
LIMS2-201ENST00000324938 QSER1Q2KHR3 1735 aa24.35■■□□□ 1.49
LIMS2-201ENST00000324938 KLRG2A4D1S0 409 aaPredicted RBP24.35■■□□□ 1.49
LIMS2-201ENST00000324938 POLRMTO00411 1230 aaKnown RBP24.35■■□□□ 1.49
LIMS2-201ENST00000324938 CDK8P49336 464 aa24.35■■□□□ 1.49
LIMS2-201ENST00000324938 GALNT17Q6IS24 598 aa24.35■■□□□ 1.49
LIMS2-201ENST00000324938 TYW1BQ6NUM6 668 aa24.35■■□□□ 1.49
LIMS2-201ENST00000324938 FAM177A1Q8N128 213 aaPredicted RBP24.35■■□□□ 1.49
LIMS2-201ENST00000324938 LZTS2Q9BRK4 669 aa24.35■■□□□ 1.49
LIMS2-201ENST00000324938 STX8Q9UNK0 236 aa24.35■■□□□ 1.49
LIMS2-201ENST00000324938 CYTH3O43739 400 aa24.34■■□□□ 1.49
LIMS2-201ENST00000324938 RHBDL3P58872 404 aa24.34■■□□□ 1.49
LIMS2-201ENST00000324938 IL17AQ16552 155 aa24.34■■□□□ 1.49
LIMS2-201ENST00000324938 TMX1Q9H3N1 280 aa24.34■■□□□ 1.49
LIMS2-201ENST00000324938 WWC2Q6AWC2 1192 aa24.34■■□□□ 1.49
LIMS2-201ENST00000324938 C4orf32Q8N8J7 132 aa24.34■■□□□ 1.49
LIMS2-201ENST00000324938 IQUBQ8NA54 791 aa24.34■■□□□ 1.49
LIMS2-201ENST00000324938 PPP1R13BQ96KQ4 1090 aa24.34■■□□□ 1.49
LIMS2-201ENST00000324938 EYA3Q99504 573 aa24.34■■□□□ 1.49
LIMS2-201ENST00000324938 CUL4BQ13620 913 aa24.33■■□□□ 1.49
LIMS2-201ENST00000324938 TMC4Q7Z404 712 aa24.33■■□□□ 1.49
LIMS2-201ENST00000324938 NEDD1Q8NHV4 660 aa24.33■■□□□ 1.49
LIMS2-201ENST00000324938 CDK11BP21127 795 aaKnown RBP24.32■■□□□ 1.48
LIMS2-201ENST00000324938 LONP1P36776 959 aaKnown RBP24.32■■□□□ 1.48
LIMS2-201ENST00000324938 TBX2Q13207 712 aaPredicted RBP24.32■■□□□ 1.48
LIMS2-201ENST00000324938 SYCP1Q15431 976 aa24.32■■□□□ 1.48
LIMS2-201ENST00000324938 HSP90AA4PQ58FG1 418 aa24.32■■□□□ 1.48
LIMS2-201ENST00000324938 PDXDC2PQ6P474 469 aa24.32■■□□□ 1.48
LIMS2-201ENST00000324938 ZNF592Q92610 1267 aa24.32■■□□□ 1.48
LIMS2-201ENST00000324938 BARHL2Q9NY43 387 aa24.32■■□□□ 1.48
LIMS2-201ENST00000324938 NRXN2Q9P2S2 1712 aa24.32■■□□□ 1.48
LIMS2-201ENST00000324938 SYNRGQ9UMZ2 1314 aa24.32■■□□□ 1.48
LIMS2-201ENST00000324938 STXBP3O00186 592 aa24.32■■□□□ 1.48
LIMS2-201ENST00000324938 CASP1P29466 404 aa24.32■■□□□ 1.48
LIMS2-201ENST00000324938 SPZ1Q9BXG8 430 aa24.32■■□□□ 1.48
LIMS2-201ENST00000324938 SAMSN1Q9NSI8 373 aaKnown RBP24.31■■□□□ 1.48
LIMS2-201ENST00000324938 PCDHA6Q9UN73 950 aa24.31■■□□□ 1.48
LIMS2-201ENST00000324938 PCDHA8Q9Y5H6 950 aa24.31■■□□□ 1.48
LIMS2-201ENST00000324938 CCDC194A0A1B0GVG4 234 aa24.31■■□□□ 1.48
LIMS2-201ENST00000324938 CD44P16070 742 aaKnown RBP24.31■■□□□ 1.48
LIMS2-201ENST00000324938 SPATA1Q5VX52 437 aa24.31■■□□□ 1.48
LIMS2-201ENST00000324938 RASGRP4Q8TDF6 673 aa24.31■■□□□ 1.48
LIMS2-201ENST00000324938 ANKRD7Q92527 254 aa24.31■■□□□ 1.48
LIMS2-201ENST00000324938 CCP110O43303 1012 aa24.3■■□□□ 1.48
LIMS2-201ENST00000324938 HEATR3Q7Z4Q2 680 aa24.3■■□□□ 1.48
LIMS2-201ENST00000324938 KLRF2D3W0D1 207 aa24.29■■□□□ 1.48
LIMS2-201ENST00000324938 C6orf229H3BNL8 230 aa24.29■■□□□ 1.48
LIMS2-201ENST00000324938 KIF18AQ8NI77 898 aa24.29■■□□□ 1.48
LIMS2-201ENST00000324938 EP400Q96L91 3159 aa24.29■■□□□ 1.48
LIMS2-201ENST00000324938 PPP1R3GB7ZBB8 358 aa24.29■■□□□ 1.48
LIMS2-201ENST00000324938 PPEF1O14829 653 aaPredicted RBP24.29■■□□□ 1.48
LIMS2-201ENST00000324938 GTPBP6O43824 516 aaPredicted RBP24.29■■□□□ 1.48
LIMS2-201ENST00000324938 HSPA1LP34931 641 aa24.29■■□□□ 1.48
LIMS2-201ENST00000324938 SPECC1LQ69YQ0 1117 aa24.29■■□□□ 1.48
LIMS2-201ENST00000324938 SP8Q8IXZ3 490 aa24.29■■□□□ 1.48
LIMS2-201ENST00000324938 A0A1B0GTH6 734 aa24.28■■□□□ 1.48
LIMS2-201ENST00000324938 TXLNAP40222 546 aa24.28■■□□□ 1.48
LIMS2-201ENST00000324938 NOVP48745 357 aa24.28■■□□□ 1.48
LIMS2-201ENST00000324938 PTPN21Q16825 1174 aa24.28■■□□□ 1.48
LIMS2-201ENST00000324938 FCHSD1Q86WN1 690 aa24.28■■□□□ 1.48
LIMS2-201ENST00000324938 TMEM139Q8IV31 216 aa24.28■■□□□ 1.48
LIMS2-201ENST00000324938 MTMR7Q9Y216 660 aa24.28■■□□□ 1.48
LIMS2-201ENST00000324938 PLIN4Q96Q06 1357 aa24.28■■□□□ 1.48
LIMS2-201ENST00000324938 TUBB4AP04350 444 aa24.28■■□□□ 1.48
LIMS2-201ENST00000324938 PARP1P09874 1014 aaKnown RBP24.28■■□□□ 1.48
LIMS2-201ENST00000324938 NR1I3Q14994 352 aa24.28■■□□□ 1.48
LIMS2-201ENST00000324938 DAGLAQ9Y4D2 1042 aa24.28■■□□□ 1.48
LIMS2-201ENST00000324938 GOLGA8HP0CJ92 632 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms