RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 MFSD14CQ5VZR4 134 aa14.81□□□□□ -0.04
TPM3-204ENST00000323144 SHCBP1Q8NEM2 672 aa14.81□□□□□ -0.04
TPM3-204ENST00000323144 CCDC17Q96LX7 622 aa14.81□□□□□ -0.04
TPM3-204ENST00000323144 SEC62Q99442 399 aaKnown RBP14.81□□□□□ -0.04
TPM3-204ENST00000323144 STAP2Q9UGK3 403 aa14.81□□□□□ -0.04
TPM3-204ENST00000323144 PLIN4Q96Q06 1357 aa14.81□□□□□ -0.04
TPM3-204ENST00000323144 MINDY4BA8MYZ0 360 aa14.8□□□□□ -0.04
TPM3-204ENST00000323144 COBLO75128 1261 aa14.8□□□□□ -0.04
TPM3-204ENST00000323144 PRDM1O75626 825 aa14.8□□□□□ -0.04
TPM3-204ENST00000323144 TDO2P48775 406 aa14.8□□□□□ -0.04
TPM3-204ENST00000323144 SBK1Q52WX2 424 aa14.8□□□□□ -0.04
TPM3-204ENST00000323144 ANO1Q5XXA6 986 aa14.8□□□□□ -0.04
TPM3-204ENST00000323144 NCAPG2Q86XI2 1143 aa14.8□□□□□ -0.04
TPM3-204ENST00000323144 CRBNQ96SW2 442 aa14.8□□□□□ -0.04
TPM3-204ENST00000323144 DDX20Q9UHI6 824 aaKnown RBP14.8□□□□□ -0.04
TPM3-204ENST00000323144 TTC41PQ6P2S7 1318 aa14.8□□□□□ -0.04
TPM3-204ENST00000323144 FOXP2O15409 715 aa14.79□□□□□ -0.04
TPM3-204ENST00000323144 CNGA1P29973 690 aa14.79□□□□□ -0.04
TPM3-204ENST00000323144 MB21D1Q8N884 522 aa14.79□□□□□ -0.04
TPM3-204ENST00000323144 REPS2Q8NFH8 660 aa14.79□□□□□ -0.04
TPM3-204ENST00000323144 FSD1Q9BTV5 496 aa14.79□□□□□ -0.04
TPM3-204ENST00000323144 IGKV6D-41A0A0C4DH26 115 aa14.78□□□□□ -0.04
TPM3-204ENST00000323144 NDUFB10O96000 172 aa14.78□□□□□ -0.04
TPM3-204ENST00000323144 MX1P20591 662 aa14.78□□□□□ -0.04
TPM3-204ENST00000323144 MAGEA10P43363 369 aaPredicted RBP14.78□□□□□ -0.04
TPM3-204ENST00000323144 OLFML2BQ68BL8 750 aa14.78□□□□□ -0.04
TPM3-204ENST00000323144 CCDC129Q6ZRS4 1044 aa14.78□□□□□ -0.04
TPM3-204ENST00000323144 DPP9Q86TI2 863 aa14.78□□□□□ -0.04
TPM3-204ENST00000323144 LRRC47Q8N1G4 583 aaKnown RBP14.78□□□□□ -0.04
TPM3-204ENST00000323144 LRCH3Q96II8 777 aa14.78□□□□□ -0.04
TPM3-204ENST00000323144 GDF15Q99988 308 aa14.78□□□□□ -0.04
TPM3-204ENST00000323144 KANSL2Q9H9L4 492 aa14.78□□□□□ -0.04
TPM3-204ENST00000323144 GOPCQ9HD26 462 aa14.78□□□□□ -0.04
TPM3-204ENST00000323144 HOXC10Q9NYD6 342 aa14.78□□□□□ -0.04
TPM3-204ENST00000323144 ZNF214Q9UL59 606 aaPredicted RBP14.78□□□□□ -0.04
TPM3-204ENST00000323144 PPP1R9AQ9ULJ8 1098 aa14.78□□□□□ -0.04
TPM3-204ENST00000323144 PGK2P07205 417 aa14.77□□□□□ -0.05
TPM3-204ENST00000323144 ZFYP08048 801 aaPredicted RBP14.77□□□□□ -0.05
TPM3-204ENST00000323144 GIMAP6Q6P9H5 292 aa14.77□□□□□ -0.05
TPM3-204ENST00000323144 RASGRP2Q7LDG7 609 aa14.77□□□□□ -0.05
TPM3-204ENST00000323144 MAML3Q96JK9 1138 aa14.77□□□□□ -0.05
TPM3-204ENST00000323144 VWA5AO00534 786 aa14.76□□□□□ -0.05
TPM3-204ENST00000323144 FAM47AQ5JRC9 791 aa14.76□□□□□ -0.05
TPM3-204ENST00000323144 PRAMEF19Q5SWL8 479 aa14.76□□□□□ -0.05
TPM3-204ENST00000323144 RIOX2Q8IUF8 465 aa14.76□□□□□ -0.05
TPM3-204ENST00000323144 LENG1Q96BZ8 264 aaPredicted RBP14.76□□□□□ -0.05
TPM3-204ENST00000323144 CEP95Q96GE4 821 aa14.76□□□□□ -0.05
TPM3-204ENST00000323144 MMP19Q99542 508 aa14.76□□□□□ -0.05
TPM3-204ENST00000323144 MROH8Q9H579 483 aa14.76□□□□□ -0.05
TPM3-204ENST00000323144 ADAMTS5Q9UNA0 930 aa14.76□□□□□ -0.05
TPM3-204ENST00000323144 SMCHD1A6NHR9 2005 aa14.75□□□□□ -0.05
TPM3-204ENST00000323144 A0A1W2PPC1 479 aa14.75□□□□□ -0.05
TPM3-204ENST00000323144 APPP05067 770 aa14.75□□□□□ -0.05
TPM3-204ENST00000323144 ATN1P54259 1190 aaPredicted RBP14.75□□□□□ -0.05
TPM3-204ENST00000323144 ZMYM1Q5SVZ6 1142 aa14.75□□□□□ -0.05
TPM3-204ENST00000323144 GJC2Q5T442 439 aaPredicted RBP14.75□□□□□ -0.05
TPM3-204ENST00000323144 IFNL3Q8IZI9 196 aa14.75□□□□□ -0.05
TPM3-204ENST00000323144 SLF1Q9BQI6 1058 aa14.75□□□□□ -0.05
TPM3-204ENST00000323144 MKNK2Q9HBH9 465 aa14.75□□□□□ -0.05
TPM3-204ENST00000323144 DNM1LO00429 736 aa14.74□□□□□ -0.05
TPM3-204ENST00000323144 ERC2O15083 957 aa14.74□□□□□ -0.05
TPM3-204ENST00000323144 STRNO43815 780 aa14.74□□□□□ -0.05
TPM3-204ENST00000323144 MSCO60682 206 aa14.74□□□□□ -0.05
TPM3-204ENST00000323144 FCER1AP12319 257 aa14.74□□□□□ -0.05
TPM3-204ENST00000323144 GNAT2P19087 354 aa14.74□□□□□ -0.05
TPM3-204ENST00000323144 ABRAQ8N0Z2 381 aa14.74□□□□□ -0.05
TPM3-204ENST00000323144 YTHDC1Q96MU7 727 aaKnown RBP14.74□□□□□ -0.05
TPM3-204ENST00000323144 SENP6Q9GZR1 1112 aaPredicted RBP14.74□□□□□ -0.05
TPM3-204ENST00000323144 NYAP2Q9P242 653 aa14.74□□□□□ -0.05
TPM3-204ENST00000323144 F5H6K3 240 aa14.73□□□□□ -0.05
TPM3-204ENST00000323144 SEPT4O43236 478 aa14.73□□□□□ -0.05
TPM3-204ENST00000323144 SLC25A27O95847 323 aa14.73□□□□□ -0.05
TPM3-204ENST00000323144 MYCNP04198 464 aaPredicted RBP14.73□□□□□ -0.05
TPM3-204ENST00000323144 TAL1P17542 331 aaPredicted RBP14.73□□□□□ -0.05
TPM3-204ENST00000323144 MDM2Q00987 491 aaPredicted RBP14.73□□□□□ -0.05
TPM3-204ENST00000323144 KLRC3Q07444 240 aa14.73□□□□□ -0.05
TPM3-204ENST00000323144 PPARAQ07869 468 aa14.73□□□□□ -0.05
TPM3-204ENST00000323144 VPS53Q5VIR6 699 aa14.73□□□□□ -0.05
TPM3-204ENST00000323144 SNRNP48Q6IEG0 339 aaKnown RBP14.73□□□□□ -0.05
TPM3-204ENST00000323144 CHMP4CQ96CF2 233 aa14.73□□□□□ -0.05
TPM3-204ENST00000323144 NAPBQ9H115 298 aa14.73□□□□□ -0.05
TPM3-204ENST00000323144 CLIP2Q9UDT6 1046 aa14.73□□□□□ -0.05
TPM3-204ENST00000323144 RIPK3Q9Y572 518 aa14.73□□□□□ -0.05
TPM3-204ENST00000323144 TACC3Q9Y6A5 838 aa14.73□□□□□ -0.05
TPM3-204ENST00000323144 BMP8BP34820 402 aa14.72□□□□□ -0.05
TPM3-204ENST00000323144 STAT3P40763 770 aa14.72□□□□□ -0.05
TPM3-204ENST00000323144 RTP1P59025 263 aa14.72□□□□□ -0.05
TPM3-204ENST00000323144 ZNF792Q3KQV3 632 aa14.72□□□□□ -0.05
TPM3-204ENST00000323144 TEX13BQ9BXU2 312 aa14.72□□□□□ -0.05
TPM3-204ENST00000323144 MTMR4Q9NYA4 1195 aa14.72□□□□□ -0.05
TPM3-204ENST00000323144 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.72□□□□□ -0.05
TPM3-204ENST00000323144 A0A0D9SFI3 127 aa14.71□□□□□ -0.05
TPM3-204ENST00000323144 PATL2C9JE40 543 aaKnown RBP14.71□□□□□ -0.05
TPM3-204ENST00000323144 KBTBD13C9JR72 458 aa14.71□□□□□ -0.05
TPM3-204ENST00000323144 CTDSPL2Q05D32 466 aa14.71□□□□□ -0.05
TPM3-204ENST00000323144 KCTD2Q14681 263 aa14.71□□□□□ -0.05
TPM3-204ENST00000323144 KIFC2Q96AC6 838 aa14.71□□□□□ -0.05
TPM3-204ENST00000323144 ATP11BQ9Y2G3 1177 aa14.71□□□□□ -0.05
TPM3-204ENST00000323144 NMT2O60551 498 aa14.7□□□□□ -0.06
TPM3-204ENST00000323144 TTLL1O95922 423 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms