RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 PPP1R9AQ9ULJ8 1098 aa21.14■□□□□ 0.97
TPM1-203ENST00000317516 SYNPO2Q9UMS6 1093 aa21.14■□□□□ 0.97
TPM1-203ENST00000317516 COLQQ9Y215 455 aaPredicted RBP21.14■□□□□ 0.97
TPM1-203ENST00000317516 MSCO60682 206 aa21.13■□□□□ 0.97
TPM1-203ENST00000317516 PRDM1O75626 825 aa21.13■□□□□ 0.97
TPM1-203ENST00000317516 TSPY3P0CV98 308 aa21.13■□□□□ 0.97
TPM1-203ENST00000317516 TSPY8P0CW00 308 aa21.13■□□□□ 0.97
TPM1-203ENST00000317516 FCER1AP12319 257 aa21.13■□□□□ 0.97
TPM1-203ENST00000317516 CCND3P30281 292 aaPredicted RBP21.13■□□□□ 0.97
TPM1-203ENST00000317516 COPB2P35606 906 aa21.13■□□□□ 0.97
TPM1-203ENST00000317516 PPARAQ07869 468 aa21.13■□□□□ 0.97
TPM1-203ENST00000317516 TMEM132BQ14DG7 1078 aa21.13■□□□□ 0.97
TPM1-203ENST00000317516 PPP4R3BQ5MIZ7 849 aa21.13■□□□□ 0.97
TPM1-203ENST00000317516 NPLOC4Q8TAT6 608 aa21.13■□□□□ 0.97
TPM1-203ENST00000317516 DIS3LQ8TF46 1054 aaKnown RBP21.13■□□□□ 0.97
TPM1-203ENST00000317516 MKL1Q969V6 931 aa21.13■□□□□ 0.97
TPM1-203ENST00000317516 C11orf49Q9H6J7 331 aa21.13■□□□□ 0.97
TPM1-203ENST00000317516 HELLSQ9NRZ9 838 aa21.13■□□□□ 0.97
TPM1-203ENST00000317516 FLRT1Q9NZU1 646 aa21.13■□□□□ 0.97
TPM1-203ENST00000317516 BAZ2AQ9UIF9 1905 aaKnown RBP21.13■□□□□ 0.97
TPM1-203ENST00000317516 MYH7P12883 1935 aa21.12■□□□□ 0.97
TPM1-203ENST00000317516 VWA5AO00534 786 aa21.12■□□□□ 0.97
TPM1-203ENST00000317516 TTLL1O95922 423 aa21.12■□□□□ 0.97
TPM1-203ENST00000317516 CNGA1P29973 690 aa21.12■□□□□ 0.97
TPM1-203ENST00000317516 STAT3P40763 770 aa21.12■□□□□ 0.97
TPM1-203ENST00000317516 OLFML2BQ68BL8 750 aa21.12■□□□□ 0.97
TPM1-203ENST00000317516 LHX8Q68G74 356 aa21.12■□□□□ 0.97
TPM1-203ENST00000317516 FBXO28Q9NVF7 368 aa21.12■□□□□ 0.97
TPM1-203ENST00000317516 MTMR4Q9NYA4 1195 aa21.12■□□□□ 0.97
TPM1-203ENST00000317516 IGKV6D-41A0A0C4DH26 115 aa21.11■□□□□ 0.97
TPM1-203ENST00000317516 NDUFB10O96000 172 aa21.11■□□□□ 0.97
TPM1-203ENST00000317516 RIOX2Q8IUF8 465 aa21.11■□□□□ 0.97
TPM1-203ENST00000317516 SMC5Q8IY18 1101 aa21.11■□□□□ 0.97
TPM1-203ENST00000317516 PRPF38AQ8NAV1 312 aaKnown RBP21.11■□□□□ 0.97
TPM1-203ENST00000317516 NEDD1Q8NHV4 660 aa21.11■□□□□ 0.97
TPM1-203ENST00000317516 CEP95Q96GE4 821 aa21.11■□□□□ 0.97
TPM1-203ENST00000317516 SLF1Q9BQI6 1058 aa21.11■□□□□ 0.97
TPM1-203ENST00000317516 LNPKQ9C0E8 428 aa21.11■□□□□ 0.97
TPM1-203ENST00000317516 CTDP1Q9Y5B0 961 aaPredicted RBP21.11■□□□□ 0.97
TPM1-203ENST00000317516 CYP2C19P33261 490 aa21.1■□□□□ 0.97
TPM1-203ENST00000317516 TFAP4Q01664 338 aa21.1■□□□□ 0.97
TPM1-203ENST00000317516 CHRDL2Q6WN34 429 aa21.1■□□□□ 0.97
TPM1-203ENST00000317516 DDX20Q9UHI6 824 aaKnown RBP21.1■□□□□ 0.97
TPM1-203ENST00000317516 PLXNB2O15031 1838 aa21.09■□□□□ 0.97
TPM1-203ENST00000317516 TRIM6-TRIM34B2RNG4 842 aa21.09■□□□□ 0.97
TPM1-203ENST00000317516 COBLO75128 1261 aa21.09■□□□□ 0.97
TPM1-203ENST00000317516 MNX1P50219 401 aaPredicted RBP21.09■□□□□ 0.97
TPM1-203ENST00000317516 KCTD2Q14681 263 aa21.09■□□□□ 0.97
TPM1-203ENST00000317516 MCMDC2Q4G0Z9 681 aa21.09■□□□□ 0.97
TPM1-203ENST00000317516 B4GALNT3Q6L9W6 998 aa21.09■□□□□ 0.97
TPM1-203ENST00000317516 CCDC129Q6ZRS4 1044 aa21.09■□□□□ 0.97
TPM1-203ENST00000317516 MMP19Q99542 508 aa21.09■□□□□ 0.97
TPM1-203ENST00000317516 NUP88Q99567 741 aaPredicted RBP21.09■□□□□ 0.97
TPM1-203ENST00000317516 CEP290O15078 2479 aa21.08■□□□□ 0.97
TPM1-203ENST00000317516 ZBED4O75132 1171 aa21.08■□□□□ 0.97
TPM1-203ENST00000317516 FAM47AQ5JRC9 791 aa21.08■□□□□ 0.97
TPM1-203ENST00000317516 CHD1LQ86WJ1 897 aa21.08■□□□□ 0.97
TPM1-203ENST00000317516 GMCL1P1Q8NEA9 526 aa21.08■□□□□ 0.97
TPM1-203ENST00000317516 FEM1BQ9UK73 627 aa21.08■□□□□ 0.97
TPM1-203ENST00000317516 TSPY2A6NKD2 308 aa21.07■□□□□ 0.96
TPM1-203ENST00000317516 IGHA2P01877 340 aa21.07■□□□□ 0.96
TPM1-203ENST00000317516 ALX1Q15699 326 aa21.07■□□□□ 0.96
TPM1-203ENST00000317516 EXOC6Q8TAG9 804 aa21.07■□□□□ 0.96
TPM1-203ENST00000317516 RILPL2Q969X0 211 aa21.07■□□□□ 0.96
TPM1-203ENST00000317516 TEX13BQ9BXU2 312 aa21.07■□□□□ 0.96
TPM1-203ENST00000317516 ZNF214Q9UL59 606 aaPredicted RBP21.07■□□□□ 0.96
TPM1-203ENST00000317516 DIS3Q9Y2L1 958 aaKnown RBP21.07■□□□□ 0.96
TPM1-203ENST00000317516 CYBAP13498 195 aa21.06■□□□□ 0.96
TPM1-203ENST00000317516 SLFN13Q68D06 897 aa21.06■□□□□ 0.96
TPM1-203ENST00000317516 REPS2Q8NFH8 660 aa21.06■□□□□ 0.96
TPM1-203ENST00000317516 MAML3Q96JK9 1138 aa21.06■□□□□ 0.96
TPM1-203ENST00000317516 ANAPC4Q9UJX5 808 aa21.06■□□□□ 0.96
TPM1-203ENST00000317516 PLIN4Q96Q06 1357 aa21.06■□□□□ 0.96
TPM1-203ENST00000317516 ATP2A1O14983 1001 aa21.05■□□□□ 0.96
TPM1-203ENST00000317516 IGHDP01880 384 aa21.05■□□□□ 0.96
TPM1-203ENST00000317516 FDX1P10109 184 aa21.05■□□□□ 0.96
TPM1-203ENST00000317516 COL6A1P12109 1028 aa21.05■□□□□ 0.96
TPM1-203ENST00000317516 BMP3P12645 472 aa21.05■□□□□ 0.96
TPM1-203ENST00000317516 MFAP1P55081 439 aaKnown RBP21.05■□□□□ 0.96
TPM1-203ENST00000317516 NUCB1Q02818 461 aa21.05■□□□□ 0.96
TPM1-203ENST00000317516 CTDSPL2Q05D32 466 aa21.05■□□□□ 0.96
TPM1-203ENST00000317516 C7orf61Q8IZ16 206 aa21.05■□□□□ 0.96
TPM1-203ENST00000317516 LRRC47Q8N1G4 583 aaKnown RBP21.05■□□□□ 0.96
TPM1-203ENST00000317516 ARRDC4Q8NCT1 418 aa21.05■□□□□ 0.96
TPM1-203ENST00000317516 KIFC2Q96AC6 838 aa21.05■□□□□ 0.96
TPM1-203ENST00000317516 RBM27Q9P2N5 1060 aaKnown RBP21.05■□□□□ 0.96
TPM1-203ENST00000317516 NRBP1Q9UHY1 535 aa21.05■□□□□ 0.96
TPM1-203ENST00000317516 MYH8P13535 1937 aa21.05■□□□□ 0.96
TPM1-203ENST00000317516 FOXP2O15409 715 aa21.04■□□□□ 0.96
TPM1-203ENST00000317516 RANBP6O60518 1105 aaKnown RBP21.04■□□□□ 0.96
TPM1-203ENST00000317516 VPS53Q5VIR6 699 aa21.04■□□□□ 0.96
TPM1-203ENST00000317516 SNRNP48Q6IEG0 339 aaKnown RBP21.04■□□□□ 0.96
TPM1-203ENST00000317516 TRPV1Q8NER1 839 aa21.04■□□□□ 0.96
TPM1-203ENST00000317516 CHURC1Q8WUH1 139 aa21.04■□□□□ 0.96
TPM1-203ENST00000317516 DDX11Q96FC9 970 aa21.04■□□□□ 0.96
TPM1-203ENST00000317516 FAM227BQ96M60 508 aa21.04■□□□□ 0.96
TPM1-203ENST00000317516 OSBPL3Q9H4L5 887 aa21.04■□□□□ 0.96
TPM1-203ENST00000317516 PCDH10Q9P2E7 1040 aa21.04■□□□□ 0.96
TPM1-203ENST00000317516 ISY1Q9ULR0 285 aaKnown RBP21.04■□□□□ 0.96
TPM1-203ENST00000317516 STX8Q9UNK0 236 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms