RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 PPP2R3AQ06190 1150 aa15.05■□□□□ 0
PCDHB9-201ENST00000316105 GRAPQ13588 217 aa15.05■□□□□ 0
PCDHB9-201ENST00000316105 GRAPLQ8TC17 118 aaPredicted RBP15.05■□□□□ 0
PCDHB9-201ENST00000316105 GSDMAQ96QA5 445 aa15.05■□□□□ 0
PCDHB9-201ENST00000316105 DCP1AQ9NPI6 582 aaPredicted RBP15.05■□□□□ 0
PCDHB9-201ENST00000316105 CWC15Q9P013 229 aaKnown RBP15.05■□□□□ 0
PCDHB9-201ENST00000316105 HPS5Q9UPZ3 1129 aa15.05■□□□□ 0
PCDHB9-201ENST00000316105 SAMM50Q9Y512 469 aa15.05■□□□□ 0
PCDHB9-201ENST00000316105 CACNA1FO60840 1977 aa15.05■□□□□ 0
PCDHB9-201ENST00000316105 ERCC3P19447 782 aa15.05■□□□□ -0
PCDHB9-201ENST00000316105 TRAPPC10P48553 1259 aa15.05■□□□□ -0
PCDHB9-201ENST00000316105 ETF1P62495 437 aaKnown RBP15.05■□□□□ -0
PCDHB9-201ENST00000316105 ARID5AQ03989 594 aa15.05■□□□□ -0
PCDHB9-201ENST00000316105 TMTC3Q6ZXV5 915 aa15.05■□□□□ -0
PCDHB9-201ENST00000316105 SPATA31A1Q5TZJ5 1347 aa15.05■□□□□ -0
PCDHB9-201ENST00000316105 NTSR2O95665 410 aa15.05■□□□□ -0
PCDHB9-201ENST00000316105 TECP42680 631 aa15.05■□□□□ -0
PCDHB9-201ENST00000316105 MORC3Q14149 939 aa15.05■□□□□ -0
PCDHB9-201ENST00000316105 CCDC122Q5T0U0 273 aa15.05■□□□□ -0
PCDHB9-201ENST00000316105 SHC4Q6S5L8 630 aa15.05■□□□□ -0
PCDHB9-201ENST00000316105 TRAF5O00463 557 aa15.04■□□□□ -0
PCDHB9-201ENST00000316105 CYP26C1Q6V0L0 522 aa15.04■□□□□ -0
PCDHB9-201ENST00000316105 COL9A3Q14050 684 aaPredicted RBP15.04■□□□□ -0
PCDHB9-201ENST00000316105 MCM6Q14566 821 aa15.04■□□□□ -0
PCDHB9-201ENST00000316105 HDAC9Q9UKV0 1011 aa15.04■□□□□ -0
PCDHB9-201ENST00000316105 PCDHA4Q9UN74 947 aa15.04■□□□□ -0
PCDHB9-201ENST00000316105 OR52Z1P0C646 297 aa15.04■□□□□ -0
PCDHB9-201ENST00000316105 ERCC5P28715 1186 aaPredicted RBP15.04■□□□□ -0
PCDHB9-201ENST00000316105 LONP1P36776 959 aaKnown RBP15.04■□□□□ -0
PCDHB9-201ENST00000316105 PPP1R2P41236 205 aa15.04■□□□□ -0
PCDHB9-201ENST00000316105 ODF2Q5BJF6 829 aa15.04■□□□□ -0
PCDHB9-201ENST00000316105 CTR9Q6PD62 1173 aa15.04■□□□□ -0
PCDHB9-201ENST00000316105 NEK8Q86SG6 692 aa15.04■□□□□ -0
PCDHB9-201ENST00000316105 TMTC1Q8IUR5 882 aa15.04■□□□□ -0
PCDHB9-201ENST00000316105 ZBTB9Q96C00 473 aa15.04■□□□□ -0
PCDHB9-201ENST00000316105 EEF2KMTQ96G04 330 aa15.04■□□□□ -0
PCDHB9-201ENST00000316105 PPP2R2CQ9Y2T4 447 aa15.04■□□□□ -0
PCDHB9-201ENST00000316105 KCNJ18B7U540 433 aa15.03■□□□□ -0
PCDHB9-201ENST00000316105 IGSF3O75054 1194 aa15.03■□□□□ -0
PCDHB9-201ENST00000316105 MCM3P25205 808 aa15.03■□□□□ -0
PCDHB9-201ENST00000316105 NOP2P46087 812 aaKnown RBP15.03■□□□□ -0
PCDHB9-201ENST00000316105 KCNJ12Q14500 433 aa15.03■□□□□ -0
PCDHB9-201ENST00000316105 NEK11Q8NG66 645 aa15.03■□□□□ -0
PCDHB9-201ENST00000316105 TEKT1Q969V4 418 aa15.03■□□□□ -0
PCDHB9-201ENST00000316105 CAPZA3Q96KX2 299 aa15.03■□□□□ -0
PCDHB9-201ENST00000316105 MTA3Q9BTC8 594 aa15.03■□□□□ -0
PCDHB9-201ENST00000316105 CENPHQ9H3R5 247 aa15.03■□□□□ -0
PCDHB9-201ENST00000316105 SAMSN1Q9NSI8 373 aaKnown RBP15.03■□□□□ -0
PCDHB9-201ENST00000316105 RPN1P04843 607 aaKnown RBP15.03■□□□□ -0
PCDHB9-201ENST00000316105 SYCP3Q8IZU3 236 aa15.03■□□□□ -0
PCDHB9-201ENST00000316105 DNAJC5Q9H3Z4 198 aa15.03■□□□□ -0
PCDHB9-201ENST00000316105 PSDA5PKW4 1024 aaPredicted RBP15.03■□□□□ -0
PCDHB9-201ENST00000316105 RHOXF2BP0C7M4 288 aa15.03■□□□□ -0
PCDHB9-201ENST00000316105 GALNT17Q6IS24 598 aa15.03■□□□□ -0
PCDHB9-201ENST00000316105 FCHSD1Q86WN1 690 aa15.03■□□□□ -0
PCDHB9-201ENST00000316105 DHX40Q8IX18 779 aaKnown RBP15.03■□□□□ -0
PCDHB9-201ENST00000316105 ARHGEF1Q92888 912 aaKnown RBP15.03■□□□□ -0
PCDHB9-201ENST00000316105 IL17RAQ96F46 866 aa15.03■□□□□ -0
PCDHB9-201ENST00000316105 PPP1R13BQ96KQ4 1090 aa15.03■□□□□ -0
PCDHB9-201ENST00000316105 SLF1Q9BQI6 1058 aa15.03■□□□□ -0
PCDHB9-201ENST00000316105 RHOXF2Q9BQY4 288 aa15.03■□□□□ -0
PCDHB9-201ENST00000316105 TRAF1Q13077 416 aa15.03■□□□□ -0
PCDHB9-201ENST00000316105 IQCB1Q15051 598 aa15.03■□□□□ -0
PCDHB9-201ENST00000316105 SH3RF3Q8TEJ3 882 aaPredicted RBP15.03■□□□□ -0
PCDHB9-201ENST00000316105 TACC1O75410 805 aa15.02■□□□□ -0
PCDHB9-201ENST00000316105 CCDC65Q8IXS2 484 aa15.02■□□□□ -0
PCDHB9-201ENST00000316105 MYO6Q9UM54 1294 aa15.02■□□□□ -0
PCDHB9-201ENST00000316105 CDR1P51861 262 aa15.02■□□□□ -0
PCDHB9-201ENST00000316105 TMEM132AQ24JP5 1023 aa15.02■□□□□ -0
PCDHB9-201ENST00000316105 MSL1Q68DK7 614 aa15.02■□□□□ -0
PCDHB9-201ENST00000316105 GPIHBP1Q8IV16 184 aa15.02■□□□□ -0
PCDHB9-201ENST00000316105 KIAA0825Q8IV33 1275 aa15.02■□□□□ -0
PCDHB9-201ENST00000316105 ENOX1Q8TC92 643 aaKnown RBP15.02■□□□□ -0
PCDHB9-201ENST00000316105 TRERF1Q96PN7 1200 aa15.02■□□□□ -0
PCDHB9-201ENST00000316105 CKAP4Q07065 602 aaKnown RBP15.02□□□□□ -0.01
PCDHB9-201ENST00000316105 INTS5Q6P9B9 1019 aaKnown RBP15.02□□□□□ -0.01
PCDHB9-201ENST00000316105 USP17L2Q6R6M4 530 aa15.02□□□□□ -0.01
PCDHB9-201ENST00000316105 OGFRQ9NZT2 677 aa15.02□□□□□ -0.01
PCDHB9-201ENST00000316105 KIF1AQ12756 1690 aa15.02□□□□□ -0.01
PCDHB9-201ENST00000316105 CASP1P29466 404 aa15.01□□□□□ -0.01
PCDHB9-201ENST00000316105 RCAN1P53805 252 aa15.01□□□□□ -0.01
PCDHB9-201ENST00000316105 SETQ01105 290 aaPredicted RBP15.01□□□□□ -0.01
PCDHB9-201ENST00000316105 RAD51AP2Q09MP3 1159 aa15.01□□□□□ -0.01
PCDHB9-201ENST00000316105 ERCC6LQ2NKX8 1250 aa15.01□□□□□ -0.01
PCDHB9-201ENST00000316105 STXBP4Q6ZWJ1 553 aa15.01□□□□□ -0.01
PCDHB9-201ENST00000316105 SLC44A5Q8NCS7 719 aa15.01□□□□□ -0.01
PCDHB9-201ENST00000316105 MACROD2A1Z1Q3 448 aa15.01□□□□□ -0.01
PCDHB9-201ENST00000316105 TRIM37O94972 964 aa15.01□□□□□ -0.01
PCDHB9-201ENST00000316105 ALDH1B1P30837 517 aa15.01□□□□□ -0.01
PCDHB9-201ENST00000316105 NAA15Q9BXJ9 866 aaKnown RBP15.01□□□□□ -0.01
PCDHB9-201ENST00000316105 KCNF1Q9H3M0 494 aa15.01□□□□□ -0.01
PCDHB9-201ENST00000316105 GOLGA6L10A6NI86 522 aa15.01□□□□□ -0.01
PCDHB9-201ENST00000316105 TMCO5BA8MYB1 307 aa15.01□□□□□ -0.01
PCDHB9-201ENST00000316105 FOXN1O15353 648 aa15.01□□□□□ -0.01
PCDHB9-201ENST00000316105 BBOX1O75936 387 aa15.01□□□□□ -0.01
PCDHB9-201ENST00000316105 SF3B3Q15393 1217 aaKnown RBP15.01□□□□□ -0.01
PCDHB9-201ENST00000316105 DGKHQ86XP1 1220 aa15.01□□□□□ -0.01
PCDHB9-201ENST00000316105 PAGE5Q96GU1 130 aa15.01□□□□□ -0.01
PCDHB9-201ENST00000316105 USH1GQ495M9 461 aa15.01□□□□□ -0.01
PCDHB9-201ENST00000316105 LINC00116Q8NCU8 138 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms