RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 ANKFY1Q9P2R3 1169 aa15.02□□□□□ -0.01
RFFL-201ENST00000315249 DBNLQ9UJU6 430 aaKnown RBP15.02□□□□□ -0.01
RFFL-201ENST00000315249 SPOPO43791 374 aa15.02□□□□□ -0.01
RFFL-201ENST00000315249 ECE2O60344 883 aa15.02□□□□□ -0.01
RFFL-201ENST00000315249 LRMPQ12912 555 aa15.02□□□□□ -0.01
RFFL-201ENST00000315249 CCDC155Q8N6L0 562 aa15.02□□□□□ -0.01
RFFL-201ENST00000315249 A0A0G2JLW4 131 aa15.02□□□□□ -0.01
RFFL-201ENST00000315249 SNX16P57768 344 aa15.02□□□□□ -0.01
RFFL-201ENST00000315249 CD2APQ9Y5K6 639 aa15.02□□□□□ -0.01
RFFL-201ENST00000315249 ABCC4O15439 1325 aa15.01□□□□□ -0.01
RFFL-201ENST00000315249 SASH1O94885 1247 aa15.01□□□□□ -0.01
RFFL-201ENST00000315249 MECOMQ03112 1051 aa15.01□□□□□ -0.01
RFFL-201ENST00000315249 CTR9Q6PD62 1173 aa15.01□□□□□ -0.01
RFFL-201ENST00000315249 COPRSQ9NQ92 184 aa15.01□□□□□ -0.01
RFFL-201ENST00000315249 BSDC1Q9NW68 430 aaPredicted RBP15.01□□□□□ -0.01
RFFL-201ENST00000315249 FAM169AQ9Y6X4 670 aa15.01□□□□□ -0.01
RFFL-201ENST00000315249 MED23Q9ULK4 1368 aa15.01□□□□□ -0.01
RFFL-201ENST00000315249 E7EVH7 732 aa15.01□□□□□ -0.01
RFFL-201ENST00000315249 CHRNA5P30532 468 aa15.01□□□□□ -0.01
RFFL-201ENST00000315249 CYP4A11Q02928 519 aa15.01□□□□□ -0.01
RFFL-201ENST00000315249 PI16Q6UXB8 463 aa15.01□□□□□ -0.01
RFFL-201ENST00000315249 CCDC25Q86WR0 208 aa15.01□□□□□ -0.01
RFFL-201ENST00000315249 LZTFL1Q9NQ48 299 aa15.01□□□□□ -0.01
RFFL-201ENST00000315249 LRFN2Q9ULH4 789 aa15.01□□□□□ -0.01
RFFL-201ENST00000315249 SYNMO15061 1565 aa15.01□□□□□ -0.01
RFFL-201ENST00000315249 ATP2A1O14983 1001 aa15.01□□□□□ -0.01
RFFL-201ENST00000315249 CCDC175P0C221 793 aa15.01□□□□□ -0.01
RFFL-201ENST00000315249 P4HA1P13674 534 aa15.01□□□□□ -0.01
RFFL-201ENST00000315249 PPP1R7Q15435 360 aa15.01□□□□□ -0.01
RFFL-201ENST00000315249 CCDC186Q7Z3E2 898 aa15.01□□□□□ -0.01
RFFL-201ENST00000315249 SLFN12Q8IYM2 578 aa15.01□□□□□ -0.01
RFFL-201ENST00000315249 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.01□□□□□ -0.01
RFFL-201ENST00000315249 OVOS2A0A0G2JMS6 1433 aa15.01□□□□□ -0.01
RFFL-201ENST00000315249 OVOS2A0A0J9YW53 1432 aa15.01□□□□□ -0.01
RFFL-201ENST00000315249 OVOS2Q6IE36 1432 aa15.01□□□□□ -0.01
RFFL-201ENST00000315249 AMNQ9BXJ7 453 aa15.01□□□□□ -0.01
RFFL-201ENST00000315249 ST7Q9NRC1 585 aa15.01□□□□□ -0.01
RFFL-201ENST00000315249 KDM3AQ9Y4C1 1321 aa15.01□□□□□ -0.01
RFFL-201ENST00000315249 KRT26Q7Z3Y9 468 aa15.01□□□□□ -0.01
RFFL-201ENST00000315249 NT5C3AQ9H0P0 336 aa15.01□□□□□ -0.01
RFFL-201ENST00000315249 PNMA3Q9UL41 463 aa15.01□□□□□ -0.01
RFFL-201ENST00000315249 USTQ9Y2C2 406 aa15.01□□□□□ -0.01
RFFL-201ENST00000315249 M0R2C6 588 aa15.01□□□□□ -0.01
RFFL-201ENST00000315249 KANSL2Q9H9L4 492 aa15.01□□□□□ -0.01
RFFL-201ENST00000315249 BMP3P12645 472 aa15□□□□□ -0.01
RFFL-201ENST00000315249 FAM160A1Q05DH4 1040 aa15□□□□□ -0.01
RFFL-201ENST00000315249 DDX12PQ92771 950 aa15□□□□□ -0.01
RFFL-201ENST00000315249 TDRD3Q9H7E2 651 aaKnown RBP15□□□□□ -0.01
RFFL-201ENST00000315249 NRBP2Q9NSY0 501 aa15□□□□□ -0.01
RFFL-201ENST00000315249 CTAGE9A4FU28 777 aa15□□□□□ -0.01
RFFL-201ENST00000315249 PAK1Q13153 545 aa15□□□□□ -0.01
RFFL-201ENST00000315249 DMP1Q13316 513 aaPredicted RBP15□□□□□ -0.01
RFFL-201ENST00000315249 UBE3CQ15386 1083 aa15□□□□□ -0.01
RFFL-201ENST00000315249 DCUN1D2Q6PH85 259 aa15□□□□□ -0.01
RFFL-201ENST00000315249 RSPH3Q86UC2 560 aa15□□□□□ -0.01
RFFL-201ENST00000315249 DHX36Q9H2U1 1008 aaKnown RBP15□□□□□ -0.01
RFFL-201ENST00000315249 PNMA2Q9UL42 364 aa15□□□□□ -0.01
RFFL-201ENST00000315249 CARMIL3Q8ND23 1372 aa15□□□□□ -0.01
RFFL-201ENST00000315249 SCG2P13521 617 aa15□□□□□ -0.01
RFFL-201ENST00000315249 LIN9Q5TKA1 542 aa15□□□□□ -0.01
RFFL-201ENST00000315249 FMNL3Q8IVF7 1028 aa15□□□□□ -0.01
RFFL-201ENST00000315249 ASIC2Q16515 512 aa15□□□□□ -0.01
RFFL-201ENST00000315249 DNAI1Q9UI46 699 aa15□□□□□ -0.01
RFFL-201ENST00000315249 ZNF202O95125 648 aa15□□□□□ -0.01
RFFL-201ENST00000315249 DYNLL2Q96FJ2 89 aa15□□□□□ -0.01
RFFL-201ENST00000315249 SYNRGQ9UMZ2 1314 aa15□□□□□ -0.01
RFFL-201ENST00000315249 K7ENM7 598 aa15□□□□□ -0.01
RFFL-201ENST00000315249 PRKAB2O43741 272 aa15□□□□□ -0.01
RFFL-201ENST00000315249 SNAP25P60880 206 aa15□□□□□ -0.01
RFFL-201ENST00000315249 PPP2R5DQ14738 602 aa15□□□□□ -0.01
RFFL-201ENST00000315249 ARHGAP44Q17R89 818 aa15□□□□□ -0.01
RFFL-201ENST00000315249 PDCL2Q8N4E4 241 aa15□□□□□ -0.01
RFFL-201ENST00000315249 WRNIP1Q96S55 665 aa15□□□□□ -0.01
RFFL-201ENST00000315249 ANTXR1Q9H6X2 564 aa15□□□□□ -0.01
RFFL-201ENST00000315249 CRKP46108 304 aa14.99□□□□□ -0.01
RFFL-201ENST00000315249 RNASELQ05823 741 aaKnown RBP14.99□□□□□ -0.01
RFFL-201ENST00000315249 CDC37L1Q7L3B6 337 aa14.99□□□□□ -0.01
RFFL-201ENST00000315249 GPATCH4Q5T3I0 446 aaKnown RBP14.99□□□□□ -0.01
RFFL-201ENST00000315249 NEK8Q86SG6 692 aa14.99□□□□□ -0.01
RFFL-201ENST00000315249 KCNG1Q9UIX4 513 aa14.99□□□□□ -0.01
RFFL-201ENST00000315249 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.99□□□□□ -0.01
RFFL-201ENST00000315249 MYL5Q02045 173 aa14.99□□□□□ -0.01
RFFL-201ENST00000315249 CCDC14Q49A88 953 aa14.99□□□□□ -0.01
RFFL-201ENST00000315249 POLR3GO15318 223 aaPredicted RBP14.99□□□□□ -0.01
RFFL-201ENST00000315249 LRCH2Q5VUJ6 765 aa14.99□□□□□ -0.01
RFFL-201ENST00000315249 MCTP2Q6DN12 878 aa14.99□□□□□ -0.01
RFFL-201ENST00000315249 PPP1R16BQ96T49 567 aa14.99□□□□□ -0.01
RFFL-201ENST00000315249 CLASP1Q7Z460 1538 aa14.99□□□□□ -0.01
RFFL-201ENST00000315249 CYP2D7A0A087X1C5 515 aa14.99□□□□□ -0.01
RFFL-201ENST00000315249 ASPRV1Q53RT3 343 aa14.99□□□□□ -0.01
RFFL-201ENST00000315249 ZNF577Q9BSK1 485 aa14.99□□□□□ -0.01
RFFL-201ENST00000315249 JAKMIP2Q96AA8 810 aa14.98□□□□□ -0.01
RFFL-201ENST00000315249 ZHX2Q9Y6X8 837 aa14.98□□□□□ -0.01
RFFL-201ENST00000315249 ALKQ9UM73 1620 aa14.98□□□□□ -0.01
RFFL-201ENST00000315249 SPATA31E1Q6ZUB1 1445 aa14.98□□□□□ -0.01
RFFL-201ENST00000315249 CFAP58Q5T655 872 aa14.98□□□□□ -0.01
RFFL-201ENST00000315249 LCORLQ8N3X6 602 aa14.98□□□□□ -0.01
RFFL-201ENST00000315249 TTLL11Q8NHH1 800 aa14.98□□□□□ -0.01
RFFL-201ENST00000315249 SHTN1A0MZ66 631 aa14.98□□□□□ -0.01
RFFL-201ENST00000315249 SNAP23O00161 211 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms