RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 MB21D2Q8IYB1 491 aaPredicted RBP20.24■□□□□ 0.83
SPSB4-201ENST00000310546 STAG1Q8WVM7 1258 aa20.24■□□□□ 0.83
SPSB4-201ENST00000310546 ZBTB1Q9Y2K1 713 aa20.24■□□□□ 0.83
SPSB4-201ENST00000310546 C21orf2O43822 256 aa20.24■□□□□ 0.83
SPSB4-201ENST00000310546 SH2D3CQ8N5H7 860 aa20.24■□□□□ 0.83
SPSB4-201ENST00000310546 JADE2Q9NQC1 790 aa20.24■□□□□ 0.83
SPSB4-201ENST00000310546 REXO2Q9Y3B8 237 aaKnown RBP20.24■□□□□ 0.83
SPSB4-201ENST00000310546 NWD2Q9ULI1 1742 aa20.24■□□□□ 0.83
SPSB4-201ENST00000310546 GOLGA8KD6RF30 607 aa20.23■□□□□ 0.83
SPSB4-201ENST00000310546 PSMD14O00487 310 aa20.23■□□□□ 0.83
SPSB4-201ENST00000310546 NEBLO76041 1014 aa20.23■□□□□ 0.83
SPSB4-201ENST00000310546 FKBP4Q02790 459 aaKnown RBP eCLIP20.23■□□□□ 0.83
SPSB4-201ENST00000310546 AMOTL1Q8IY63 956 aa20.23■□□□□ 0.83
SPSB4-201ENST00000310546 KLC4Q9NSK0 619 aa20.23■□□□□ 0.83
SPSB4-201ENST00000310546 MCM8Q9UJA3 840 aa20.23■□□□□ 0.83
SPSB4-201ENST00000310546 DENND2AQ9ULE3 1009 aa20.23■□□□□ 0.83
SPSB4-201ENST00000310546 SPATA31A1Q5TZJ5 1347 aa20.23■□□□□ 0.83
SPSB4-201ENST00000310546 PDE2AO00408 941 aaPredicted RBP20.23■□□□□ 0.83
SPSB4-201ENST00000310546 MEX3CQ5U5Q3 659 aaKnown RBP20.23■□□□□ 0.83
SPSB4-201ENST00000310546 PLBD2Q8NHP8 589 aa20.23■□□□□ 0.83
SPSB4-201ENST00000310546 HDAC7Q8WUI4 952 aa20.23■□□□□ 0.83
SPSB4-201ENST00000310546 AIDAQ96BJ3 306 aa20.23■□□□□ 0.83
SPSB4-201ENST00000310546 UTRNP46939 3433 aa20.23■□□□□ 0.83
SPSB4-201ENST00000310546 CKAP4Q07065 602 aaKnown RBP20.23■□□□□ 0.83
SPSB4-201ENST00000310546 PAPPAQ13219 1627 aa20.22■□□□□ 0.83
SPSB4-201ENST00000310546 BTBD18B2RXH4 712 aa20.22■□□□□ 0.83
SPSB4-201ENST00000310546 XAGE2Q96GT9 111 aa20.22■□□□□ 0.83
SPSB4-201ENST00000310546 SLC24A3Q9HC58 644 aa20.22■□□□□ 0.83
SPSB4-201ENST00000310546 OPA1O60313 960 aa20.22■□□□□ 0.83
SPSB4-201ENST00000310546 IFIT1P09914 478 aaKnown RBP20.22■□□□□ 0.83
SPSB4-201ENST00000310546 PAX7P23759 505 aa20.22■□□□□ 0.83
SPSB4-201ENST00000310546 MATR3P43243 847 aaKnown RBP eCLIP20.22■□□□□ 0.83
SPSB4-201ENST00000310546 EZH2Q15910 746 aaKnown RBP20.22■□□□□ 0.83
SPSB4-201ENST00000310546 CDKAL1Q5VV42 579 aa20.22■□□□□ 0.83
SPSB4-201ENST00000310546 AENQ8WTP8 325 aaKnown RBP20.22■□□□□ 0.83
SPSB4-201ENST00000310546 TACO1Q9BSH4 297 aaKnown RBP20.22■□□□□ 0.83
SPSB4-201ENST00000310546 FRMD3A2A2Y4 597 aa20.21■□□□□ 0.83
SPSB4-201ENST00000310546 CDKL5O76039 1030 aa20.21■□□□□ 0.83
SPSB4-201ENST00000310546 TTMPQ5BVD1 217 aa20.21■□□□□ 0.83
SPSB4-201ENST00000310546 CCDC70Q6NSX1 233 aa20.21■□□□□ 0.83
SPSB4-201ENST00000310546 RPGRIP1Q96KN7 1286 aa20.21■□□□□ 0.83
SPSB4-201ENST00000310546 MYL10Q9BUA6 226 aa20.21■□□□□ 0.83
SPSB4-201ENST00000310546 FBXO2Q9UK22 296 aaPredicted RBP20.21■□□□□ 0.83
SPSB4-201ENST00000310546 ACTN4O43707 911 aaKnown RBP20.21■□□□□ 0.83
SPSB4-201ENST00000310546 SSBP05455 408 aaKnown RBP eCLIP20.21■□□□□ 0.83
SPSB4-201ENST00000310546 FECHP22830 423 aa20.21■□□□□ 0.83
SPSB4-201ENST00000310546 IARSP41252 1262 aaKnown RBP20.21■□□□□ 0.83
SPSB4-201ENST00000310546 CDR1P51861 262 aa20.21■□□□□ 0.83
SPSB4-201ENST00000310546 SLC7A5Q01650 507 aa20.21■□□□□ 0.83
SPSB4-201ENST00000310546 CCDC40Q4G0X9 1142 aa20.21■□□□□ 0.83
SPSB4-201ENST00000310546 CEP85LQ5SZL2 805 aa20.21■□□□□ 0.83
SPSB4-201ENST00000310546 ELOA2Q8IYF1 753 aaPredicted RBP20.21■□□□□ 0.83
SPSB4-201ENST00000310546 HAUS4Q9H6D7 363 aa20.21■□□□□ 0.83
SPSB4-201ENST00000310546 TAB2Q9NYJ8 693 aa20.21■□□□□ 0.83
SPSB4-201ENST00000310546 BCL9LQ86UU0 1499 aa20.21■□□□□ 0.83
SPSB4-201ENST00000310546 ZNF213O14771 459 aa20.2■□□□□ 0.82
SPSB4-201ENST00000310546 KRT31Q15323 416 aa20.2■□□□□ 0.82
SPSB4-201ENST00000310546 IQCA1Q86XH1 822 aa20.2■□□□□ 0.82
SPSB4-201ENST00000310546 NOSTRINQ8IVI9 506 aa20.2■□□□□ 0.82
SPSB4-201ENST00000310546 PATL2C9JE40 543 aaKnown RBP20.2■□□□□ 0.82
SPSB4-201ENST00000310546 PTPREP23469 700 aa20.2■□□□□ 0.82
SPSB4-201ENST00000310546 GUCY1A3Q02108 690 aa20.2■□□□□ 0.82
SPSB4-201ENST00000310546 PREPLQ4J6C6 727 aaPredicted RBP20.2■□□□□ 0.82
SPSB4-201ENST00000310546 KIAA1328Q86T90 577 aa20.2■□□□□ 0.82
SPSB4-201ENST00000310546 DMGDHQ9UI17 866 aaKnown RBP20.2■□□□□ 0.82
SPSB4-201ENST00000310546 PES1O00541 588 aaKnown RBP20.2■□□□□ 0.82
SPSB4-201ENST00000310546 KRT14P02533 472 aa20.2■□□□□ 0.82
SPSB4-201ENST00000310546 TOB1P50616 345 aaPredicted RBP20.2■□□□□ 0.82
SPSB4-201ENST00000310546 PPARDQ03181 441 aa20.2■□□□□ 0.82
SPSB4-201ENST00000310546 IFT88Q13099 833 aa20.2■□□□□ 0.82
SPSB4-201ENST00000310546 CUL4BQ13620 913 aa20.2■□□□□ 0.82
SPSB4-201ENST00000310546 PAPD7Q5XG87 772 aaKnown RBP20.2■□□□□ 0.82
SPSB4-201ENST00000310546 KANK3Q6NY19 840 aa20.2■□□□□ 0.82
SPSB4-201ENST00000310546 FNBP4Q8N3X1 1017 aaPredicted RBP20.2■□□□□ 0.82
SPSB4-201ENST00000310546 SENP2Q9HC62 589 aa20.2■□□□□ 0.82
SPSB4-201ENST00000310546 CTNND2Q9UQB3 1225 aa20.2■□□□□ 0.82
SPSB4-201ENST00000310546 FOXP2O15409 715 aa20.19■□□□□ 0.82
SPSB4-201ENST00000310546 STARD3NLO95772 234 aa20.19■□□□□ 0.82
SPSB4-201ENST00000310546 MICALCLQ6ZW33 695 aa20.19■□□□□ 0.82
SPSB4-201ENST00000310546 SLC26A6Q9BXS9 759 aa20.19■□□□□ 0.82
SPSB4-201ENST00000310546 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.19■□□□□ 0.82
SPSB4-201ENST00000310546 IDEP14735 1019 aa20.19■□□□□ 0.82
SPSB4-201ENST00000310546 SF3B2Q13435 895 aaKnown RBP20.19■□□□□ 0.82
SPSB4-201ENST00000310546 NAA35Q5VZE5 725 aa20.19■□□□□ 0.82
SPSB4-201ENST00000310546 CCDC13Q8IYE1 715 aa20.19■□□□□ 0.82
SPSB4-201ENST00000310546 STAMQ92783 540 aa20.19■□□□□ 0.82
SPSB4-201ENST00000310546 CSRNP2Q9H175 543 aa20.19■□□□□ 0.82
SPSB4-201ENST00000310546 ANGEL1Q9UNK9 670 aaKnown RBP20.19■□□□□ 0.82
SPSB4-201ENST00000310546 KCNJ14Q9UNX9 436 aa20.19■□□□□ 0.82
SPSB4-201ENST00000310546 PCDHB6Q9Y5E3 794 aa20.19■□□□□ 0.82
SPSB4-201ENST00000310546 ITIH6Q6UXX5 1313 aa20.18■□□□□ 0.82
SPSB4-201ENST00000310546 TNS2Q63HR2 1409 aa20.18■□□□□ 0.82
SPSB4-201ENST00000310546 PPP1R12AO14974 1030 aaPredicted RBP20.18■□□□□ 0.82
SPSB4-201ENST00000310546 PPARAQ07869 468 aa20.18■□□□□ 0.82
SPSB4-201ENST00000310546 NFXL1Q6ZNB6 911 aa20.18■□□□□ 0.82
SPSB4-201ENST00000310546 TSEN2Q8NCE0 465 aaKnown RBP20.18■□□□□ 0.82
SPSB4-201ENST00000310546 LRRC1Q9BTT6 524 aa20.18■□□□□ 0.82
SPSB4-201ENST00000310546 MACROD2A1Z1Q3 448 aa20.18■□□□□ 0.82
SPSB4-201ENST00000310546 HSF2BPO75031 334 aa20.18■□□□□ 0.82
SPSB4-201ENST00000310546 NAP1L1P55209 391 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms