RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 V9GY48 417 aaPredicted RBP14.84□□□□□ -0.03
SHANK2-AS3-201ENST00000307548 ATAD5Q96QE3 1844 aa14.84□□□□□ -0.03
SHANK2-AS3-201ENST00000307548 ASNSP08243 561 aa14.84□□□□□ -0.03
SHANK2-AS3-201ENST00000307548 PARP1P09874 1014 aaKnown RBP14.84□□□□□ -0.03
SHANK2-AS3-201ENST00000307548 KRT85P78386 507 aa14.84□□□□□ -0.03
SHANK2-AS3-201ENST00000307548 DNM1Q05193 864 aaKnown RBP14.84□□□□□ -0.03
SHANK2-AS3-201ENST00000307548 FMR1Q06787 632 aaKnown RBP eCLIP14.84□□□□□ -0.03
SHANK2-AS3-201ENST00000307548 MAP3K11Q16584 847 aa14.84□□□□□ -0.03
SHANK2-AS3-201ENST00000307548 NOL9Q5SY16 702 aaKnown RBP14.84□□□□□ -0.03
SHANK2-AS3-201ENST00000307548 CMTR1Q8N1G2 835 aaKnown RBP14.84□□□□□ -0.03
SHANK2-AS3-201ENST00000307548 AIFM3Q96NN9 605 aa14.84□□□□□ -0.03
SHANK2-AS3-201ENST00000307548 WRNIP1Q96S55 665 aa14.84□□□□□ -0.03
SHANK2-AS3-201ENST00000307548 SPZ1Q9BXG8 430 aa14.84□□□□□ -0.03
SHANK2-AS3-201ENST00000307548 DOCK1Q14185 1865 aa14.83□□□□□ -0.03
SHANK2-AS3-201ENST00000307548 TRAK2O60296 914 aa14.83□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 ITGBL1O95965 494 aaPredicted RBP14.83□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 PDHBP11177 359 aa14.83□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 EEF2P13639 858 aaKnown RBP14.83□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 XBP1P17861 261 aa14.83□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 U2AF2P26368 475 aaKnown RBP eCLIP14.83□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 KIF23Q02241 960 aaPredicted RBP14.83□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 ASPRV1Q53RT3 343 aa14.83□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 CHADLQ6NUI6 762 aa14.83□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 SCYL3Q8IZE3 742 aa14.83□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 STAG2Q8N3U4 1231 aa14.83□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 CCDC82Q8N4S0 544 aa14.83□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 CHAMP1Q96JM3 812 aa14.83□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 SCAND2PQ9GZW5 306 aaPredicted RBP14.83□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.83□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 TCHHQ07283 1943 aa14.82□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 OTOFQ9HC10 1997 aa14.82□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 PRPF40AO75400 957 aaKnown RBP14.82□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 ICA1Q05084 483 aa14.82□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 PFKFB3Q16875 520 aaPredicted RBP14.82□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 OTUD7BQ6GQQ9 843 aa14.82□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.82□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 ZKSCAN4Q969J2 545 aaPredicted RBP14.82□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 SH3GLB2Q9NR46 395 aa14.82□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 CFAP45Q9UL16 551 aa14.82□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 CNPY2Q9Y2B0 182 aa14.82□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 CEP350Q5VT06 3117 aa14.82□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 ELP1O95163 1332 aa14.82□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 A0A1W2PRG0 241 aa14.81□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 KLRF2D3W0D1 207 aa14.81□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 UBE2Q2LH0YL09 131 aa14.81□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 PPP1R12BO60237 982 aaPredicted RBP14.81□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 MMP1P03956 469 aa14.81□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 SCG2P13521 617 aa14.81□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 NF2P35240 595 aa14.81□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 GUCY1B3Q02153 619 aa14.81□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 PRKG1Q13976 671 aa14.81□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 GPATCH4Q5T3I0 446 aaKnown RBP14.81□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 ZNF396Q96N95 335 aaPredicted RBP14.81□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 RIOX1Q9H6W3 641 aa14.81□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 GJB4Q9NTQ9 266 aa14.81□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 MYH6P13533 1939 aa14.81□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 USP17L5A8MUK1 530 aa14.81□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 FOSBP53539 338 aa14.81□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 C1QTNF8P60827 252 aa14.81□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 MAP3K9P80192 1104 aa14.81□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 ZNF543Q08ER8 600 aa14.81□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 SAFBQ15424 915 aaKnown RBP eCLIP14.81□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 SLC35G1Q2M3R5 365 aa14.81□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 KLHL40Q2TBA0 621 aa14.81□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 USP17L2Q6R6M4 530 aa14.81□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 MOB2Q70IA6 237 aa14.81□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 CCDC84Q86UT8 332 aaPredicted RBP14.81□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 LRRC47Q8N1G4 583 aaKnown RBP14.81□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 GMCL1P1Q8NEA9 526 aa14.81□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 ACER1Q8TDN7 264 aa14.81□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 DCAF4Q8WV16 495 aa14.81□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 PHF20Q9BVI0 1012 aa14.81□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 FOXP1Q9H334 677 aaPredicted RBP14.81□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 SNCAIPQ9Y6H5 919 aa14.81□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 CYTH3O43739 400 aa14.8□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 VGLL4Q14135 290 aa14.8□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 FOXD4L6Q3SYB3 417 aaPredicted RBP14.8□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 LDLRAD1Q5T700 205 aa14.8□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 FAM173BQ6P4H8 233 aa14.8□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 FOXD4L3Q6VB84 417 aaPredicted RBP14.8□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 RCOR1Q9UKL0 485 aa14.8□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 TMX2Q9Y320 296 aa14.8□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 MYH4Q9Y623 1939 aa14.8□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 MBD3O95983 291 aa14.79□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 PTPRAP18433 802 aa14.79□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 ECE1P42892 770 aa14.79□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 IREB2P48200 963 aaKnown RBP14.79□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 RASGRP2Q7LDG7 609 aa14.79□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 WDR18Q9BV38 432 aa14.79□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 PHIPQ8WWQ0 1821 aa14.79□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 KIF28PB7ZC32 967 aa14.78□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 UBE2HP62256 183 aa14.78□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 ATP2B2Q01814 1243 aa14.78□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 MYSM1Q5VVJ2 828 aa14.78□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 LEO1Q8WVC0 666 aaPredicted RBP14.78□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 SHISA4Q96DD7 197 aa14.78□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 GMCL1Q96IK5 515 aa14.78□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 ARHGEF10LQ9HCE6 1279 aa14.78□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 RTEL1Q9NZ71 1219 aa14.78□□□□□ -0.04
SHANK2-AS3-201ENST00000307548 UNCXA6NJT0 531 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms