RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 NELFCDQ8IXH7 590 aa11.93□□□□□ -0.5
SYNPO2-201ENST00000307142 PPP1R14CQ8TAE6 165 aa11.93□□□□□ -0.5
SYNPO2-201ENST00000307142 CCDC42Q96M95 316 aa11.93□□□□□ -0.5
SYNPO2-201ENST00000307142 GPBP1L1Q9HC44 474 aaPredicted RBP11.93□□□□□ -0.5
SYNPO2-201ENST00000307142 COPRSQ9NQ92 184 aa11.93□□□□□ -0.5
SYNPO2-201ENST00000307142 ARHGEF40Q8TER5 1519 aa11.93□□□□□ -0.5
SYNPO2-201ENST00000307142 GOLGA6L9A6NEM1 432 aa11.93□□□□□ -0.5
SYNPO2-201ENST00000307142 LRRIQ4A6NIV6 560 aa11.93□□□□□ -0.5
SYNPO2-201ENST00000307142 CETN3O15182 167 aa11.93□□□□□ -0.5
SYNPO2-201ENST00000307142 DDAH1O94760 285 aa11.93□□□□□ -0.5
SYNPO2-201ENST00000307142 MYL3P08590 195 aa11.93□□□□□ -0.5
SYNPO2-201ENST00000307142 PCP11498 1178 aaKnown RBP11.93□□□□□ -0.5
SYNPO2-201ENST00000307142 SNX21Q969T3 373 aa11.93□□□□□ -0.5
SYNPO2-201ENST00000307142 NOX5Q96PH1 765 aa11.93□□□□□ -0.5
SYNPO2-201ENST00000307142 MMS19Q96T76 1030 aa11.93□□□□□ -0.5
SYNPO2-201ENST00000307142 AMNQ9BXJ7 453 aa11.93□□□□□ -0.5
SYNPO2-201ENST00000307142 TDRD3Q9H7E2 651 aaKnown RBP11.93□□□□□ -0.5
SYNPO2-201ENST00000307142 RASAL2Q9UJF2 1139 aa11.93□□□□□ -0.5
SYNPO2-201ENST00000307142 ATP6V0A2Q9Y487 856 aa11.93□□□□□ -0.5
SYNPO2-201ENST00000307142 STAMBPO95630 424 aa11.92□□□□□ -0.5
SYNPO2-201ENST00000307142 ERCC3P19447 782 aa11.92□□□□□ -0.5
SYNPO2-201ENST00000307142 RNASELQ05823 741 aaKnown RBP11.92□□□□□ -0.5
SYNPO2-201ENST00000307142 MIS18BP1Q6P0N0 1132 aa11.92□□□□□ -0.5
SYNPO2-201ENST00000307142 NT5C3AQ9H0P0 336 aa11.92□□□□□ -0.5
SYNPO2-201ENST00000307142 TLR7Q9NYK1 1049 aaKnown RBP11.92□□□□□ -0.5
SYNPO2-201ENST00000307142 ZHX2Q9Y6X8 837 aa11.92□□□□□ -0.5
SYNPO2-201ENST00000307142 GABPAQ06546 454 aa11.92□□□□□ -0.5
SYNPO2-201ENST00000307142 GPATCH4Q5T3I0 446 aaKnown RBP11.92□□□□□ -0.5
SYNPO2-201ENST00000307142 KRT40Q6A162 431 aa11.92□□□□□ -0.5
SYNPO2-201ENST00000307142 SNW1Q13573 536 aaKnown RBP11.92□□□□□ -0.5
SYNPO2-201ENST00000307142 C16orf45Q96MC5 204 aaPredicted RBP11.92□□□□□ -0.5
SYNPO2-201ENST00000307142 GOLGA6L7A0A1B0GV03 622 aa11.92□□□□□ -0.5
SYNPO2-201ENST00000307142 INF2Q27J81 1249 aa11.92□□□□□ -0.5
SYNPO2-201ENST00000307142 SYDE2Q5VT97 1194 aa11.92□□□□□ -0.5
SYNPO2-201ENST00000307142 FERP16591 822 aa11.92□□□□□ -0.5
SYNPO2-201ENST00000307142 TNFAIP3P21580 790 aa11.92□□□□□ -0.5
SYNPO2-201ENST00000307142 GPBP1Q86WP2 473 aa11.92□□□□□ -0.5
SYNPO2-201ENST00000307142 ANKFY1Q9P2R3 1169 aa11.92□□□□□ -0.5
SYNPO2-201ENST00000307142 FANCBQ8NB91 859 aa11.92□□□□□ -0.5
SYNPO2-201ENST00000307142 INTS4Q96HW7 963 aaKnown RBP11.92□□□□□ -0.5
SYNPO2-201ENST00000307142 ZNF577Q9BSK1 485 aa11.92□□□□□ -0.5
SYNPO2-201ENST00000307142 RETREG2Q8NC44 543 aa11.91□□□□□ -0.5
SYNPO2-201ENST00000307142 SREK1Q8WXA9 508 aaKnown RBP11.91□□□□□ -0.5
SYNPO2-201ENST00000307142 MINPP1Q9UNW1 487 aa11.91□□□□□ -0.5
SYNPO2-201ENST00000307142 CUTAO60888 179 aa11.91□□□□□ -0.5
SYNPO2-201ENST00000307142 CCDC114Q96M63 670 aa11.91□□□□□ -0.5
SYNPO2-201ENST00000307142 ZMYM6O95789 1325 aa11.91□□□□□ -0.5
SYNPO2-201ENST00000307142 DTNBO60941 627 aa11.91□□□□□ -0.5
SYNPO2-201ENST00000307142 CD19P15391 556 aa11.91□□□□□ -0.5
SYNPO2-201ENST00000307142 ZSCAN20P17040 1043 aaPredicted RBP11.91□□□□□ -0.5
SYNPO2-201ENST00000307142 SYT1P21579 422 aa11.91□□□□□ -0.5
SYNPO2-201ENST00000307142 GPSM2P81274 684 aa11.91□□□□□ -0.5
SYNPO2-201ENST00000307142 TTLL11Q8NHH1 800 aa11.91□□□□□ -0.5
SYNPO2-201ENST00000307142 DBNLQ9UJU6 430 aaKnown RBP11.91□□□□□ -0.5
SYNPO2-201ENST00000307142 RNF123Q5XPI4 1314 aa11.91□□□□□ -0.5
SYNPO2-201ENST00000307142 GNG11P61952 73 aa11.91□□□□□ -0.5
SYNPO2-201ENST00000307142 LIN9Q5TKA1 542 aa11.91□□□□□ -0.5
SYNPO2-201ENST00000307142 ZBED2Q9BTP6 218 aa11.91□□□□□ -0.5
SYNPO2-201ENST00000307142 INCENPQ9NQS7 918 aa11.91□□□□□ -0.5
SYNPO2-201ENST00000307142 ZNF215Q9UL58 517 aaPredicted RBP11.91□□□□□ -0.5
SYNPO2-201ENST00000307142 K7ENM7 598 aa11.91□□□□□ -0.5
SYNPO2-201ENST00000307142 SCG2P13521 617 aa11.91□□□□□ -0.5
SYNPO2-201ENST00000307142 KIF5AQ12840 1032 aa11.91□□□□□ -0.5
SYNPO2-201ENST00000307142 SH3RF3Q8TEJ3 882 aaPredicted RBP11.91□□□□□ -0.5
SYNPO2-201ENST00000307142 DYNLL2Q96FJ2 89 aa11.91□□□□□ -0.5
SYNPO2-201ENST00000307142 ADD2P35612 726 aa11.91□□□□□ -0.5
SYNPO2-201ENST00000307142 SNAP25P60880 206 aa11.91□□□□□ -0.5
SYNPO2-201ENST00000307142 DDX12PQ92771 950 aa11.91□□□□□ -0.5
SYNPO2-201ENST00000307142 BRPF3Q9ULD4 1205 aa11.91□□□□□ -0.5
SYNPO2-201ENST00000307142 JAK2O60674 1132 aa11.9□□□□□ -0.5
SYNPO2-201ENST00000307142 TACC1O75410 805 aa11.9□□□□□ -0.5
SYNPO2-201ENST00000307142 RBM10P98175 930 aaKnown RBP11.9□□□□□ -0.5
SYNPO2-201ENST00000307142 RASA3Q14644 834 aa11.9□□□□□ -0.5
SYNPO2-201ENST00000307142 NFIXQ14938 502 aa11.9□□□□□ -0.5
SYNPO2-201ENST00000307142 LCORLQ8N3X6 602 aa11.9□□□□□ -0.5
SYNPO2-201ENST00000307142 DIP2BQ9P265 1576 aa11.9□□□□□ -0.5
SYNPO2-201ENST00000307142 TNNC2P02585 160 aa11.9□□□□□ -0.5
SYNPO2-201ENST00000307142 CYP2J2P51589 502 aa11.9□□□□□ -0.5
SYNPO2-201ENST00000307142 TYRO3Q06418 890 aa11.9□□□□□ -0.5
SYNPO2-201ENST00000307142 LRCH2Q5VUJ6 765 aa11.9□□□□□ -0.5
SYNPO2-201ENST00000307142 CSGALNACT2Q8N6G5 542 aa11.9□□□□□ -0.5
SYNPO2-201ENST00000307142 NLRP7Q8WX94 980 aa11.9□□□□□ -0.5
SYNPO2-201ENST00000307142 OTUD5Q96G74 571 aa11.9□□□□□ -0.5
SYNPO2-201ENST00000307142 PREX1Q8TCU6 1659 aa11.9□□□□□ -0.5
SYNPO2-201ENST00000307142 UQCRHLA0A096LP55 91 aa11.9□□□□□ -0.5
SYNPO2-201ENST00000307142 UQCRHP07919 91 aa11.9□□□□□ -0.5
SYNPO2-201ENST00000307142 ATF7P17544 494 aaPredicted RBP11.9□□□□□ -0.5
SYNPO2-201ENST00000307142 KRT83P78385 493 aa11.9□□□□□ -0.5
SYNPO2-201ENST00000307142 NEK8Q86SG6 692 aa11.9□□□□□ -0.5
SYNPO2-201ENST00000307142 FTOQ9C0B1 505 aaKnown RBP eCLIP11.9□□□□□ -0.5
SYNPO2-201ENST00000307142 ADCY9O60503 1353 aa11.9□□□□□ -0.5
SYNPO2-201ENST00000307142 A0A1W2PRG0 241 aa11.9□□□□□ -0.5
SYNPO2-201ENST00000307142 MAATS1Q7Z4T9 603 aa11.9□□□□□ -0.5
SYNPO2-201ENST00000307142 ASNSP08243 561 aa11.9□□□□□ -0.51
SYNPO2-201ENST00000307142 PTH1RQ03431 593 aa11.9□□□□□ -0.51
SYNPO2-201ENST00000307142 TFDP1Q14186 410 aa11.9□□□□□ -0.51
SYNPO2-201ENST00000307142 VPS16Q9H269 839 aa11.9□□□□□ -0.51
SYNPO2-201ENST00000307142 ZSWIM4Q9H7M6 989 aa11.9□□□□□ -0.51
SYNPO2-201ENST00000307142 GPR108Q9NPR9 543 aa11.9□□□□□ -0.51
SYNPO2-201ENST00000307142 PRKAB2O43741 272 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms