RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 CLUL1Q15846 466 aa9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 TXNRD1Q16881 649 aa9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 RCSD1Q6JBY9 416 aa9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 G2E3Q7L622 706 aa9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 VPS52Q8N1B4 723 aa9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 ANKRD35Q8N283 1001 aa9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 FAM204AQ9H8W3 233 aa9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 CD2APQ9Y5K6 639 aa9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 ELP1O95163 1332 aa9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 SYCE3A1L190 88 aa9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 GNA14O95837 355 aa9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 PPARAQ07869 468 aa9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 CALCRLQ16602 461 aa9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 GADL1Q6ZQY3 521 aa9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 TMC6Q7Z403 805 aa9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 TMX3Q96JJ7 454 aa9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 STIM2Q9P246 746 aa9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 ZNF215Q9UL58 517 aaPredicted RBP9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 STAT2P52630 851 aa9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 MTA3Q9BTC8 594 aa9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 ARMT1Q9H993 441 aa9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 POLR2MP0CAP2 368 aa9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 PPP2R5AQ15172 486 aa9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 NONOQ15233 471 aaKnown RBP eCLIP9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 TCP10Q12799 353 aa9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 RASA3Q14644 834 aa9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 DPP9Q86TI2 863 aa9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 PNMA8AQ86V59 439 aaPredicted RBP9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 RAB11FIP4Q86YS3 637 aa9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 GPR161Q8N6U8 529 aaKnown RBP9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 AMNQ9BXJ7 453 aa9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 CALCOCO1Q9P1Z2 691 aa9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 FLOT1O75955 427 aa9.24□□□□□ -0.93
PCDHB1-201ENST00000306549 RBM10P98175 930 aaKnown RBP9.24□□□□□ -0.93
PCDHB1-201ENST00000306549 RBM46Q8TBY0 533 aaKnown RBP9.24□□□□□ -0.93
PCDHB1-201ENST00000306549 ZSCAN10Q96SZ4 725 aaPredicted RBP9.24□□□□□ -0.93
PCDHB1-201ENST00000306549 GPCPD1Q9NPB8 672 aa9.24□□□□□ -0.93
PCDHB1-201ENST00000306549 KIF11P52732 1056 aa9.24□□□□□ -0.93
PCDHB1-201ENST00000306549 EPSTI1Q96J88 318 aa9.24□□□□□ -0.93
PCDHB1-201ENST00000306549 AGTPBP1Q9UPW5 1226 aa9.24□□□□□ -0.93
PCDHB1-201ENST00000306549 KRT83P78385 493 aa9.24□□□□□ -0.93
PCDHB1-201ENST00000306549 TFAP4Q01664 338 aa9.24□□□□□ -0.93
PCDHB1-201ENST00000306549 PDE4DQ08499 809 aa9.24□□□□□ -0.93
PCDHB1-201ENST00000306549 GNAT1P11488 350 aa9.24□□□□□ -0.93
PCDHB1-201ENST00000306549 SLC4A8Q2Y0W8 1093 aa9.24□□□□□ -0.93
PCDHB1-201ENST00000306549 ZNF594Q96JF6 807 aaPredicted RBP9.24□□□□□ -0.93
PCDHB1-201ENST00000306549 GREM2Q9H772 168 aa9.24□□□□□ -0.93
PCDHB1-201ENST00000306549 CNPY2Q9Y2B0 182 aa9.24□□□□□ -0.93
PCDHB1-201ENST00000306549 ADGRB2O60241 1585 aa9.24□□□□□ -0.93
PCDHB1-201ENST00000306549 ATP5DP30049 168 aa9.24□□□□□ -0.93
PCDHB1-201ENST00000306549 BTDP43251 543 aa9.24□□□□□ -0.93
PCDHB1-201ENST00000306549 TRAPPC10P48553 1259 aa9.24□□□□□ -0.93
PCDHB1-201ENST00000306549 TRPC3Q13507 836 aa9.24□□□□□ -0.93
PCDHB1-201ENST00000306549 PLCB4Q15147 1175 aa9.24□□□□□ -0.93
PCDHB1-201ENST00000306549 UTP14CQ5TAP6 766 aaKnown RBP9.24□□□□□ -0.93
PCDHB1-201ENST00000306549 ADPGKQ9BRR6 497 aa9.24□□□□□ -0.93
PCDHB1-201ENST00000306549 CCNT1O60563 726 aaKnown RBP9.24□□□□□ -0.93
PCDHB1-201ENST00000306549 COA7Q96BR5 231 aa9.24□□□□□ -0.93
PCDHB1-201ENST00000306549 HOXC10Q9NYD6 342 aa9.24□□□□□ -0.93
PCDHB1-201ENST00000306549 ZNF830Q96NB3 372 aaPredicted RBP9.23□□□□□ -0.93
PCDHB1-201ENST00000306549 STAP2Q9UGK3 403 aa9.23□□□□□ -0.93
PCDHB1-201ENST00000306549 CYP27B1O15528 508 aa9.23□□□□□ -0.93
PCDHB1-201ENST00000306549 GAS7O60861 476 aa9.23□□□□□ -0.93
PCDHB1-201ENST00000306549 ZNF853P0CG23 659 aa9.23□□□□□ -0.93
PCDHB1-201ENST00000306549 CCDC129Q6ZRS4 1044 aa9.23□□□□□ -0.93
PCDHB1-201ENST00000306549 TMEM179Q6ZVK1 233 aa9.23□□□□□ -0.93
PCDHB1-201ENST00000306549 MAPKAPK5Q8IW41 473 aa9.23□□□□□ -0.93
PCDHB1-201ENST00000306549 ZBTB8OSQ8IWT0 167 aa9.23□□□□□ -0.93
PCDHB1-201ENST00000306549 NEK11Q8NG66 645 aa9.23□□□□□ -0.93
PCDHB1-201ENST00000306549 RIOK1Q9BRS2 568 aaKnown RBP9.23□□□□□ -0.93
PCDHB1-201ENST00000306549 FBXO11Q86XK2 927 aa9.23□□□□□ -0.93
PCDHB1-201ENST00000306549 ARID5AQ03989 594 aa9.23□□□□□ -0.93
PCDHB1-201ENST00000306549 SNW1Q13573 536 aaKnown RBP9.23□□□□□ -0.93
PCDHB1-201ENST00000306549 RETREG2Q8NC44 543 aa9.23□□□□□ -0.93
PCDHB1-201ENST00000306549 AFG3L2Q9Y4W6 797 aa9.23□□□□□ -0.93
PCDHB1-201ENST00000306549 PALM3A6NDB9 673 aaPredicted RBP9.23□□□□□ -0.93
PCDHB1-201ENST00000306549 PPP1R7Q15435 360 aa9.23□□□□□ -0.93
PCDHB1-201ENST00000306549 KRT24Q2M2I5 525 aa9.23□□□□□ -0.93
PCDHB1-201ENST00000306549 IFNL3Q8IZI9 196 aa9.23□□□□□ -0.93
PCDHB1-201ENST00000306549 MTFR1LQ9H019 292 aa9.23□□□□□ -0.93
PCDHB1-201ENST00000306549 NUCKS1Q9H1E3 243 aaKnown RBP9.23□□□□□ -0.93
PCDHB1-201ENST00000306549 ZAP70P43403 619 aa9.23□□□□□ -0.93
PCDHB1-201ENST00000306549 ATP6V0A1Q93050 837 aa9.23□□□□□ -0.93
PCDHB1-201ENST00000306549 ZNF341Q9BYN7 854 aa9.23□□□□□ -0.93
PCDHB1-201ENST00000306549 TMEM110-MUSTN1A8MSY1 372 aa9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 TGFB2P61812 414 aa9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 TRIM14Q14142 442 aa9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 PROCA1Q8NCQ7 364 aaPredicted RBP9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 PLA2G12BQ9BX93 195 aa9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 SLC27A2O14975 620 aa9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 RCAN1P53805 252 aa9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 SEL1L2Q5TEA6 688 aa9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 EP400NLQ6ZTU2 488 aa9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 B4E1Z4 1266 aa9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 ATF7P17544 494 aaPredicted RBP9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 CALCOCO2Q13137 446 aa9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 BIRC3Q13489 604 aa9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 ZNF569Q5MCW4 686 aa9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 CUEDC2Q9H467 287 aa9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 KDM6AO15550 1401 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms