RNA–Protein interactions for RNA: ENST00000302273.2

VPREB1-201, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene VPREB1, Length 626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-201ENST00000302273 PRPF38AQ8NAV1 312 aaKnown RBP10.35□□□□□ -0.75
VPREB1-201ENST00000302273 PNMA1Q8ND90 353 aa10.35□□□□□ -0.75
VPREB1-201ENST00000302273 TBC1D32Q96NH3 1257 aa10.35□□□□□ -0.75
VPREB1-201ENST00000302273 PTPN18Q99952 460 aa10.35□□□□□ -0.75
VPREB1-201ENST00000302273 ZFYVE28Q9HCC9 887 aa10.35□□□□□ -0.75
VPREB1-201ENST00000302273 WBP1LQ9NX94 342 aa10.35□□□□□ -0.75
VPREB1-201ENST00000302273 FEM1BQ9UK73 627 aa10.35□□□□□ -0.75
VPREB1-201ENST00000302273 ADAMTS5Q9UNA0 930 aa10.35□□□□□ -0.75
VPREB1-201ENST00000302273 SLC12A7Q9Y666 1083 aa10.35□□□□□ -0.75
VPREB1-201ENST00000302273 TAF6LQ9Y6J9 622 aa10.35□□□□□ -0.75
VPREB1-201ENST00000302273 CCDC69A6NI79 296 aa10.34□□□□□ -0.75
VPREB1-201ENST00000302273 NMT2O60551 498 aa10.34□□□□□ -0.75
VPREB1-201ENST00000302273 TLR2O60603 784 aa10.34□□□□□ -0.75
VPREB1-201ENST00000302273 NDUFB10O96000 172 aa10.34□□□□□ -0.75
VPREB1-201ENST00000302273 HSPA1AP0DMV8 641 aaKnown RBP10.34□□□□□ -0.75
VPREB1-201ENST00000302273 HSPA1BP0DMV9 641 aaKnown RBP10.34□□□□□ -0.75
VPREB1-201ENST00000302273 PDHBP11177 359 aa10.34□□□□□ -0.75
VPREB1-201ENST00000302273 MCM2P49736 904 aa10.34□□□□□ -0.75
VPREB1-201ENST00000302273 OAZ1P54368 228 aa10.34□□□□□ -0.75
VPREB1-201ENST00000302273 IRX3P78415 501 aaPredicted RBP10.34□□□□□ -0.75
VPREB1-201ENST00000302273 TROAPQ12815 778 aa10.34□□□□□ -0.75
VPREB1-201ENST00000302273 ARHGEF6Q15052 776 aa10.34□□□□□ -0.75
VPREB1-201ENST00000302273 SHROOM1Q2M3G4 852 aaPredicted RBP10.34□□□□□ -0.75
VPREB1-201ENST00000302273 TEX2Q8IWB9 1127 aa10.34□□□□□ -0.75
VPREB1-201ENST00000302273 ZNF274Q96GC6 653 aaPredicted RBP10.34□□□□□ -0.75
VPREB1-201ENST00000302273 LY9Q9HBG7 655 aa10.34□□□□□ -0.75
VPREB1-201ENST00000302273 BAZ2AQ9UIF9 1905 aaKnown RBP10.34□□□□□ -0.75
VPREB1-201ENST00000302273 LAMB1P07942 1786 aa10.34□□□□□ -0.75
VPREB1-201ENST00000302273 ATP2A1O14983 1001 aa10.33□□□□□ -0.76
VPREB1-201ENST00000302273 DHX16O60231 1041 aaKnown RBP10.33□□□□□ -0.76
VPREB1-201ENST00000302273 AOC2O75106 756 aa10.33□□□□□ -0.76
VPREB1-201ENST00000302273 PARP1P09874 1014 aaKnown RBP10.33□□□□□ -0.76
VPREB1-201ENST00000302273 COPB2P35606 906 aa10.33□□□□□ -0.76
VPREB1-201ENST00000302273 STAT2P52630 851 aa10.33□□□□□ -0.76
VPREB1-201ENST00000302273 ZNF543Q08ER8 600 aa10.33□□□□□ -0.76
VPREB1-201ENST00000302273 NFXL1Q6ZNB6 911 aa10.33□□□□□ -0.76
VPREB1-201ENST00000302273 GADL1Q6ZQY3 521 aa10.33□□□□□ -0.76
VPREB1-201ENST00000302273 FAM43AQ8N2R8 423 aa10.33□□□□□ -0.76
VPREB1-201ENST00000302273 ZKSCAN3Q9BRR0 538 aa10.33□□□□□ -0.76
VPREB1-201ENST00000302273 ASCC2Q9H1I8 757 aaPredicted RBP10.33□□□□□ -0.76
VPREB1-201ENST00000302273 RPAP3Q9H6T3 665 aaPredicted RBP10.33□□□□□ -0.76
VPREB1-201ENST00000302273 PDRG1Q9NUG6 133 aa10.33□□□□□ -0.76
VPREB1-201ENST00000302273 RBM28Q9NW13 759 aaKnown RBP10.33□□□□□ -0.76
VPREB1-201ENST00000302273 RABGAP1Q9Y3P9 1069 aa10.33□□□□□ -0.76
VPREB1-201ENST00000302273 DOCK1Q14185 1865 aa10.33□□□□□ -0.76
VPREB1-201ENST00000302273 PALM3A6NDB9 673 aaPredicted RBP10.32□□□□□ -0.76
VPREB1-201ENST00000302273 IGF2BP3O00425 579 aaKnown RBP eCLIP10.32□□□□□ -0.76
VPREB1-201ENST00000302273 ST18O60284 1047 aa10.32□□□□□ -0.76
VPREB1-201ENST00000302273 CAPN15O75808 1086 aa10.32□□□□□ -0.76
VPREB1-201ENST00000302273 GNRH1P01148 92 aa10.32□□□□□ -0.76
VPREB1-201ENST00000302273 DSG3P32926 999 aa10.32□□□□□ -0.76
VPREB1-201ENST00000302273 NEK4P51957 841 aa10.32□□□□□ -0.76
VPREB1-201ENST00000302273 CCNA1P78396 465 aa10.32□□□□□ -0.76
VPREB1-201ENST00000302273 MKRN3Q13064 507 aaKnown RBP10.32□□□□□ -0.76
VPREB1-201ENST00000302273 GRM1Q13255 1194 aa10.32□□□□□ -0.76
VPREB1-201ENST00000302273 TAF1CQ15572 869 aaPredicted RBP10.32□□□□□ -0.76
VPREB1-201ENST00000302273 FAM110CQ1W6H9 321 aa10.32□□□□□ -0.76
VPREB1-201ENST00000302273 Q6ZUG5 572 aa10.32□□□□□ -0.76
VPREB1-201ENST00000302273 CCDC84Q86UT8 332 aaPredicted RBP10.32□□□□□ -0.76
VPREB1-201ENST00000302273 ZNF654Q8IZM8 581 aa10.32□□□□□ -0.76
VPREB1-201ENST00000302273 LRRC47Q8N1G4 583 aaKnown RBP10.32□□□□□ -0.76
VPREB1-201ENST00000302273 FANCBQ8NB91 859 aa10.32□□□□□ -0.76
VPREB1-201ENST00000302273 CTCFLQ8NI51 663 aaPredicted RBP10.32□□□□□ -0.76
VPREB1-201ENST00000302273 SMCR8Q8TEV9 937 aaPredicted RBP10.32□□□□□ -0.76
VPREB1-201ENST00000302273 IPO9Q96P70 1041 aaKnown RBP10.32□□□□□ -0.76
VPREB1-201ENST00000302273 SLF1Q9BQI6 1058 aa10.32□□□□□ -0.76
VPREB1-201ENST00000302273 RNF186Q9NXI6 227 aa10.32□□□□□ -0.76
VPREB1-201ENST00000302273 RBM27Q9P2N5 1060 aaKnown RBP10.32□□□□□ -0.76
VPREB1-201ENST00000302273 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.32□□□□□ -0.76
VPREB1-201ENST00000302273 MORF4L1Q9UBU8 362 aa10.32□□□□□ -0.76
VPREB1-201ENST00000302273 PPP1R9AQ9ULJ8 1098 aa10.32□□□□□ -0.76
VPREB1-201ENST00000302273 LAMA4Q16363 1823 aa10.32□□□□□ -0.76
VPREB1-201ENST00000302273 GREB1LQ9C091 1923 aaPredicted RBP10.31□□□□□ -0.76
VPREB1-201ENST00000302273 FOXN1O15353 648 aa10.31□□□□□ -0.76
VPREB1-201ENST00000302273 ZBTB43O43298 467 aa10.31□□□□□ -0.76
VPREB1-201ENST00000302273 FLOT1O75955 427 aa10.31□□□□□ -0.76
VPREB1-201ENST00000302273 HERVK_113P62684 666 aa10.31□□□□□ -0.76
VPREB1-201ENST00000302273 GRM4Q14833 912 aa10.31□□□□□ -0.76
VPREB1-201ENST00000302273 TREML2Q5T2D2 321 aa10.31□□□□□ -0.76
VPREB1-201ENST00000302273 APOA5Q6Q788 366 aa10.31□□□□□ -0.76
VPREB1-201ENST00000302273 C17orf99Q6UX52 265 aa10.31□□□□□ -0.76
VPREB1-201ENST00000302273 CHST3Q7LGC8 479 aa10.31□□□□□ -0.76
VPREB1-201ENST00000302273 CLEC10AQ8IUN9 316 aa10.31□□□□□ -0.76
VPREB1-201ENST00000302273 TNS4Q8IZW8 715 aa10.31□□□□□ -0.76
VPREB1-201ENST00000302273 SPICE1Q8N0Z3 855 aa10.31□□□□□ -0.76
VPREB1-201ENST00000302273 FAM177A1Q8N128 213 aaPredicted RBP10.31□□□□□ -0.76
VPREB1-201ENST00000302273 GPRC5AQ8NFJ5 357 aa10.31□□□□□ -0.76
VPREB1-201ENST00000302273 NKX2-3Q8TAU0 364 aa10.31□□□□□ -0.76
VPREB1-201ENST00000302273 ZIC5Q96T25 663 aa10.31□□□□□ -0.76
VPREB1-201ENST00000302273 KIF2CQ99661 725 aa10.31□□□□□ -0.76
VPREB1-201ENST00000302273 TANGO6Q9C0B7 1094 aa10.31□□□□□ -0.76
VPREB1-201ENST00000302273 NID2Q14112 1375 aa10.3□□□□□ -0.76
VPREB1-201ENST00000302273 THSD7BQ9C0I4 1608 aa10.3□□□□□ -0.76
VPREB1-201ENST00000302273 TMEM232C9JQI7 657 aa10.3□□□□□ -0.76
VPREB1-201ENST00000302273 KLRF2D3W0D1 207 aa10.3□□□□□ -0.76
VPREB1-201ENST00000302273 VWA5AO00534 786 aa10.3□□□□□ -0.76
VPREB1-201ENST00000302273 ZBED4O75132 1171 aa10.3□□□□□ -0.76
VPREB1-201ENST00000302273 SLC25A27O95847 323 aa10.3□□□□□ -0.76
VPREB1-201ENST00000302273 ZYXQ15942 572 aaKnown RBP10.3□□□□□ -0.76
VPREB1-201ENST00000302273 KIAA1755Q5JYT7 1200 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms