RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 AGBL3Q8NEM8 1001 aa25.59■■□□□ 1.69
SMAD1-201ENST00000302085 PPP1R9BQ96SB3 815 aa25.59■■□□□ 1.69
SMAD1-201ENST00000302085 TAOK3Q9H2K8 898 aa25.59■■□□□ 1.69
SMAD1-201ENST00000302085 ZNF70Q9UC06 446 aaPredicted RBP25.59■■□□□ 1.69
SMAD1-201ENST00000302085 CD2APQ9Y5K6 639 aa25.59■■□□□ 1.69
SMAD1-201ENST00000302085 BRCA1P38398 1863 aaKnown RBP25.58■■□□□ 1.69
SMAD1-201ENST00000302085 CALML3P27482 149 aa25.58■■□□□ 1.69
SMAD1-201ENST00000302085 SHROOM1Q2M3G4 852 aaPredicted RBP25.58■■□□□ 1.69
SMAD1-201ENST00000302085 OGFOD1Q8N543 542 aa25.58■■□□□ 1.69
SMAD1-201ENST00000302085 KRI1Q8N9T8 703 aaKnown RBP25.58■■□□□ 1.69
SMAD1-201ENST00000302085 ANP32BQ92688 251 aaKnown RBP25.58■■□□□ 1.69
SMAD1-201ENST00000302085 FRMPD2Q68DX3 1309 aaPredicted RBP25.58■■□□□ 1.69
SMAD1-201ENST00000302085 TRIM75PA6NK02 468 aa25.58■■□□□ 1.69
SMAD1-201ENST00000302085 STXBP3O00186 592 aa25.58■■□□□ 1.69
SMAD1-201ENST00000302085 UVSSAQ2YD98 709 aa25.58■■□□□ 1.69
SMAD1-201ENST00000302085 RESP18Q5W5W9 173 aa25.58■■□□□ 1.69
SMAD1-201ENST00000302085 UBA5Q9GZZ9 404 aa25.58■■□□□ 1.69
SMAD1-201ENST00000302085 BARHL2Q9NY43 387 aa25.58■■□□□ 1.69
SMAD1-201ENST00000302085 FBXO2Q9UK22 296 aaPredicted RBP25.58■■□□□ 1.69
SMAD1-201ENST00000302085 HPSEQ9Y251 543 aa25.58■■□□□ 1.69
SMAD1-201ENST00000302085 FAM237AA0A1B0GTK4 181 aa25.57■■□□□ 1.68
SMAD1-201ENST00000302085 NFKBIEO00221 500 aa25.57■■□□□ 1.68
SMAD1-201ENST00000302085 ZNF202O95125 648 aa25.57■■□□□ 1.68
SMAD1-201ENST00000302085 PTPREP23469 700 aa25.57■■□□□ 1.68
SMAD1-201ENST00000302085 FER1L6Q2WGJ9 1857 aa25.57■■□□□ 1.68
SMAD1-201ENST00000302085 HEATR3Q7Z4Q2 680 aa25.57■■□□□ 1.68
SMAD1-201ENST00000302085 BLIDQ8IZY5 108 aa25.57■■□□□ 1.68
SMAD1-201ENST00000302085 TRIM34Q9BYJ4 488 aa25.57■■□□□ 1.68
SMAD1-201ENST00000302085 RIOX1Q9H6W3 641 aa25.57■■□□□ 1.68
SMAD1-201ENST00000302085 PCDHA4Q9UN74 947 aa25.57■■□□□ 1.68
SMAD1-201ENST00000302085 CLRN2A0PK11 232 aa25.56■■□□□ 1.68
SMAD1-201ENST00000302085 TCP10L2B9ZVM9 353 aa25.56■■□□□ 1.68
SMAD1-201ENST00000302085 WNT7AO00755 349 aa25.56■■□□□ 1.68
SMAD1-201ENST00000302085 CCDC173Q0VFZ6 552 aa25.56■■□□□ 1.68
SMAD1-201ENST00000302085 ASPRV1Q53RT3 343 aa25.56■■□□□ 1.68
SMAD1-201ENST00000302085 VAT1LQ9HCJ6 419 aa25.56■■□□□ 1.68
SMAD1-201ENST00000302085 CEP131Q9UPN4 1083 aa25.56■■□□□ 1.68
SMAD1-201ENST00000302085 SASS6Q6UVJ0 657 aa25.56■■□□□ 1.68
SMAD1-201ENST00000302085 UPF1Q92900 1129 aaKnown RBP eCLIP25.56■■□□□ 1.68
SMAD1-201ENST00000302085 RRP36Q96EU6 259 aaKnown RBP25.56■■□□□ 1.68
SMAD1-201ENST00000302085 TMOD2Q9NZR1 351 aa25.56■■□□□ 1.68
SMAD1-201ENST00000302085 NOL7Q9UMY1 257 aaKnown RBP25.56■■□□□ 1.68
SMAD1-201ENST00000302085 COL2A1P02458 1487 aaPredicted RBP25.56■■□□□ 1.68
SMAD1-201ENST00000302085 PSDA5PKW4 1024 aaPredicted RBP25.55■■□□□ 1.68
SMAD1-201ENST00000302085 PTGER2P43116 358 aa25.55■■□□□ 1.68
SMAD1-201ENST00000302085 ATP2B2Q01814 1243 aa25.55■■□□□ 1.68
SMAD1-201ENST00000302085 GRIN1Q05586 938 aa25.55■■□□□ 1.68
SMAD1-201ENST00000302085 PIK3AP1Q6ZUJ8 805 aa25.55■■□□□ 1.68
SMAD1-201ENST00000302085 MORC2Q9Y6X9 1032 aaPredicted RBP25.55■■□□□ 1.68
SMAD1-201ENST00000302085 M0R2N6 131 aa25.55■■□□□ 1.68
SMAD1-201ENST00000302085 SPDYE2Q495Y8 402 aa25.55■■□□□ 1.68
SMAD1-201ENST00000302085 PPP4R3BQ5MIZ7 849 aa25.55■■□□□ 1.68
SMAD1-201ENST00000302085 MTMR14Q8NCE2 650 aa25.55■■□□□ 1.68
SMAD1-201ENST00000302085 PIGSQ96S52 555 aa25.55■■□□□ 1.68
SMAD1-201ENST00000302085 SDF4Q9BRK5 362 aa25.55■■□□□ 1.68
SMAD1-201ENST00000302085 GPCPD1Q9NPB8 672 aa25.55■■□□□ 1.68
SMAD1-201ENST00000302085 BCS1LQ9Y276 419 aa25.55■■□□□ 1.68
SMAD1-201ENST00000302085 ZNF543Q08ER8 600 aa25.54■■□□□ 1.68
SMAD1-201ENST00000302085 CIAPIN1Q6FI81 312 aa25.54■■□□□ 1.68
SMAD1-201ENST00000302085 SIAH1Q8IUQ4 282 aa25.54■■□□□ 1.68
SMAD1-201ENST00000302085 DAGLBQ8NCG7 672 aa25.54■■□□□ 1.68
SMAD1-201ENST00000302085 CCDC148Q8NFR7 591 aa25.54■■□□□ 1.68
SMAD1-201ENST00000302085 JDP2Q8WYK2 163 aa25.54■■□□□ 1.68
SMAD1-201ENST00000302085 MKL1Q969V6 931 aa25.54■■□□□ 1.68
SMAD1-201ENST00000302085 KANSL2Q9H9L4 492 aa25.54■■□□□ 1.68
SMAD1-201ENST00000302085 SRPRBQ9Y5M8 271 aaKnown RBP25.54■■□□□ 1.68
SMAD1-201ENST00000302085 EEF2P13639 858 aaKnown RBP25.53■■□□□ 1.68
SMAD1-201ENST00000302085 ZNF174Q15697 407 aa25.53■■□□□ 1.68
SMAD1-201ENST00000302085 TTC38Q5R3I4 469 aa25.53■■□□□ 1.68
SMAD1-201ENST00000302085 HOMER1Q86YM7 354 aa25.53■■□□□ 1.68
SMAD1-201ENST00000302085 FAM177A1Q8N128 213 aaPredicted RBP25.53■■□□□ 1.68
SMAD1-201ENST00000302085 FAM151AQ8WW52 585 aa25.53■■□□□ 1.68
SMAD1-201ENST00000302085 CSRNP1Q96S65 589 aa25.53■■□□□ 1.68
SMAD1-201ENST00000302085 NYAP2Q9P242 653 aa25.53■■□□□ 1.68
SMAD1-201ENST00000302085 SYKP43405 635 aa25.53■■□□□ 1.68
SMAD1-201ENST00000302085 RRP1BQ14684 758 aaKnown RBP25.53■■□□□ 1.68
SMAD1-201ENST00000302085 SEPT2Q15019 361 aa25.53■■□□□ 1.68
SMAD1-201ENST00000302085 ANO6Q4KMQ2 910 aa25.53■■□□□ 1.68
SMAD1-201ENST00000302085 GALNT17Q6IS24 598 aa25.53■■□□□ 1.68
SMAD1-201ENST00000302085 ZBED3Q96IU2 234 aaPredicted RBP25.53■■□□□ 1.68
SMAD1-201ENST00000302085 PCDHA6Q9UN73 950 aa25.53■■□□□ 1.68
SMAD1-201ENST00000302085 PCDHA8Q9Y5H6 950 aa25.53■■□□□ 1.68
SMAD1-201ENST00000302085 JAG1P78504 1218 aa25.52■■□□□ 1.68
SMAD1-201ENST00000302085 SPECC1Q5M775 1068 aa25.52■■□□□ 1.68
SMAD1-201ENST00000302085 ZNF579Q8NAF0 562 aaKnown RBP25.52■■□□□ 1.68
SMAD1-201ENST00000302085 RASGRP4Q8TDF6 673 aa25.52■■□□□ 1.68
SMAD1-201ENST00000302085 PDLIM2Q96JY6 352 aa25.52■■□□□ 1.68
SMAD1-201ENST00000302085 CNTNAP1P78357 1384 aa25.52■■□□□ 1.68
SMAD1-201ENST00000302085 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.51■■□□□ 1.67
SMAD1-201ENST00000302085 GDF11O95390 407 aa25.51■■□□□ 1.67
SMAD1-201ENST00000302085 TRAPPC10P48553 1259 aa25.51■■□□□ 1.67
SMAD1-201ENST00000302085 ABCB5Q2M3G0 1257 aa25.51■■□□□ 1.67
SMAD1-201ENST00000302085 TTBK2Q6IQ55 1244 aa25.51■■□□□ 1.67
SMAD1-201ENST00000302085 TMEM179Q6ZVK1 233 aa25.51■■□□□ 1.67
SMAD1-201ENST00000302085 ERCC4Q92889 916 aaPredicted RBP25.51■■□□□ 1.67
SMAD1-201ENST00000302085 TIGD1Q96MW7 591 aa25.51■■□□□ 1.67
SMAD1-201ENST00000302085 ZMYND12Q9H0C1 365 aa25.51■■□□□ 1.67
SMAD1-201ENST00000302085 SEC63Q9UGP8 760 aaKnown RBP25.51■■□□□ 1.67
SMAD1-201ENST00000302085 MYH4Q9Y623 1939 aa25.51■■□□□ 1.67
SMAD1-201ENST00000302085 FAM200AQ8TCP9 573 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms