RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 MPHOSPH10O00566 681 aaKnown RBP11.47□□□□□ -0.57
FOXN4-201ENST00000299162 GYS1P13807 737 aa11.47□□□□□ -0.57
FOXN4-201ENST00000299162 RBM6P78332 1123 aaKnown RBP11.47□□□□□ -0.57
FOXN4-201ENST00000299162 LRRC47Q8N1G4 583 aaKnown RBP11.47□□□□□ -0.57
FOXN4-201ENST00000299162 FNBP4Q8N3X1 1017 aaPredicted RBP11.47□□□□□ -0.57
FOXN4-201ENST00000299162 WDR66Q8TBY9 1149 aa11.47□□□□□ -0.57
FOXN4-201ENST00000299162 ZNF622Q969S3 477 aaKnown RBP eCLIP11.47□□□□□ -0.57
FOXN4-201ENST00000299162 CALCOCO1Q9P1Z2 691 aa11.47□□□□□ -0.57
FOXN4-201ENST00000299162 ARPP21Q9UBL0 812 aaPredicted RBP11.47□□□□□ -0.57
FOXN4-201ENST00000299162 POLLQ9UGP5 575 aa11.47□□□□□ -0.57
FOXN4-201ENST00000299162 HOOK1Q9UJC3 728 aaKnown RBP11.47□□□□□ -0.57
FOXN4-201ENST00000299162 CEP131Q9UPN4 1083 aa11.47□□□□□ -0.57
FOXN4-201ENST00000299162 XDHP47989 1333 aa11.47□□□□□ -0.57
FOXN4-201ENST00000299162 CICQ96RK0 1608 aaPredicted RBP11.46□□□□□ -0.57
FOXN4-201ENST00000299162 TOP1P11387 765 aaKnown RBP11.46□□□□□ -0.57
FOXN4-201ENST00000299162 RC3H1Q5TC82 1133 aaKnown RBP11.46□□□□□ -0.57
FOXN4-201ENST00000299162 TYW1BQ6NUM6 668 aa11.46□□□□□ -0.57
FOXN4-201ENST00000299162 CNTNAP5Q8WYK1 1306 aa11.46□□□□□ -0.58
FOXN4-201ENST00000299162 PRPF3O43395 683 aaKnown RBP11.46□□□□□ -0.58
FOXN4-201ENST00000299162 SEC31AO94979 1220 aaKnown RBP11.46□□□□□ -0.58
FOXN4-201ENST00000299162 ERCC3P19447 782 aa11.46□□□□□ -0.58
FOXN4-201ENST00000299162 RBM5P52756 815 aaKnown RBP eCLIP11.46□□□□□ -0.58
FOXN4-201ENST00000299162 TCP10Q12799 353 aa11.46□□□□□ -0.58
FOXN4-201ENST00000299162 ARHGAP29Q52LW3 1261 aa11.46□□□□□ -0.58
FOXN4-201ENST00000299162 CT47A1Q5JQC4 288 aaPredicted RBP11.46□□□□□ -0.58
FOXN4-201ENST00000299162 RCSD1Q6JBY9 416 aa11.46□□□□□ -0.58
FOXN4-201ENST00000299162 SARM1Q6SZW1 724 aa11.46□□□□□ -0.58
FOXN4-201ENST00000299162 GPIHBP1Q8IV16 184 aa11.46□□□□□ -0.58
FOXN4-201ENST00000299162 PHF20Q9BVI0 1012 aa11.46□□□□□ -0.58
FOXN4-201ENST00000299162 ZSWIM4Q9H7M6 989 aa11.46□□□□□ -0.58
FOXN4-201ENST00000299162 ANAPC4Q9UJX5 808 aa11.46□□□□□ -0.58
FOXN4-201ENST00000299162 FAM205AQ6ZU69 1335 aa11.45□□□□□ -0.58
FOXN4-201ENST00000299162 CCDC194A0A1B0GVG4 234 aa11.45□□□□□ -0.58
FOXN4-201ENST00000299162 CCT6AP40227 531 aaKnown RBP11.45□□□□□ -0.58
FOXN4-201ENST00000299162 CCZ1BP86790 482 aa11.45□□□□□ -0.58
FOXN4-201ENST00000299162 CCZ1P86791 482 aaPredicted RBP11.45□□□□□ -0.58
FOXN4-201ENST00000299162 FUT2Q10981 343 aa11.45□□□□□ -0.58
FOXN4-201ENST00000299162 KARSQ15046 597 aaKnown RBP11.45□□□□□ -0.58
FOXN4-201ENST00000299162 EYA3Q99504 573 aa11.45□□□□□ -0.58
FOXN4-201ENST00000299162 YY1AP1Q9H869 796 aa11.45□□□□□ -0.58
FOXN4-201ENST00000299162 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.45□□□□□ -0.58
FOXN4-201ENST00000299162 DDX60Q8IY21 1712 aaKnown RBP11.45□□□□□ -0.58
FOXN4-201ENST00000299162 C12orf60Q5U649 245 aa11.45□□□□□ -0.58
FOXN4-201ENST00000299162 RBM28Q9NW13 759 aaKnown RBP11.45□□□□□ -0.58
FOXN4-201ENST00000299162 SRPRBQ9Y5M8 271 aaKnown RBP11.45□□□□□ -0.58
FOXN4-201ENST00000299162 KIF5BP33176 963 aa11.45□□□□□ -0.58
FOXN4-201ENST00000299162 DDR1Q08345 913 aa11.45□□□□□ -0.58
FOXN4-201ENST00000299162 LETM2Q2VYF4 491 aa11.45□□□□□ -0.58
FOXN4-201ENST00000299162 GPCPD1Q9NPB8 672 aa11.45□□□□□ -0.58
FOXN4-201ENST00000299162 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.45□□□□□ -0.58
FOXN4-201ENST00000299162 JAKMIP3Q5VZ66 844 aa11.44□□□□□ -0.58
FOXN4-201ENST00000299162 TMEM47Q9BQJ4 181 aa11.44□□□□□ -0.58
FOXN4-201ENST00000299162 MORC2Q9Y6X9 1032 aaPredicted RBP11.44□□□□□ -0.58
FOXN4-201ENST00000299162 KLRF2D3W0D1 207 aa11.44□□□□□ -0.58
FOXN4-201ENST00000299162 SEMA3EO15041 775 aa11.44□□□□□ -0.58
FOXN4-201ENST00000299162 SLU7O95391 586 aaKnown RBP11.44□□□□□ -0.58
FOXN4-201ENST00000299162 CALM1P0DP23 149 aa11.44□□□□□ -0.58
FOXN4-201ENST00000299162 CALM2P0DP24 149 aa11.44□□□□□ -0.58
FOXN4-201ENST00000299162 CALM3P0DP25 149 aa11.44□□□□□ -0.58
FOXN4-201ENST00000299162 NAPAP54920 295 aa11.44□□□□□ -0.58
FOXN4-201ENST00000299162 MNS1Q8NEH6 495 aa11.44□□□□□ -0.58
FOXN4-201ENST00000299162 DESI2Q9BSY9 194 aa11.44□□□□□ -0.58
FOXN4-201ENST00000299162 HSD3B7Q9H2F3 369 aa11.44□□□□□ -0.58
FOXN4-201ENST00000299162 DBNDD1Q9H9R9 158 aa11.44□□□□□ -0.58
FOXN4-201ENST00000299162 KCNQ5Q9NR82 932 aa11.44□□□□□ -0.58
FOXN4-201ENST00000299162 RSPH14Q9UHP6 348 aa11.44□□□□□ -0.58
FOXN4-201ENST00000299162 TUBE1Q9UJT0 475 aa11.44□□□□□ -0.58
FOXN4-201ENST00000299162 ZSCAN29Q8IWY8 852 aaPredicted RBP11.44□□□□□ -0.58
FOXN4-201ENST00000299162 BANK1Q8NDB2 785 aa11.44□□□□□ -0.58
FOXN4-201ENST00000299162 CTNND2Q9UQB3 1225 aa11.44□□□□□ -0.58
FOXN4-201ENST00000299162 URI1O94763 535 aaPredicted RBP11.43□□□□□ -0.58
FOXN4-201ENST00000299162 CDK8P49336 464 aa11.43□□□□□ -0.58
FOXN4-201ENST00000299162 RRAGBQ5VZM2 374 aa11.43□□□□□ -0.58
FOXN4-201ENST00000299162 RBM17Q96I25 401 aaKnown RBP11.43□□□□□ -0.58
FOXN4-201ENST00000299162 LEMD3Q9Y2U8 911 aa11.43□□□□□ -0.58
FOXN4-201ENST00000299162 PCDHAC2Q9Y5I4 1007 aa11.43□□□□□ -0.58
FOXN4-201ENST00000299162 ANKRD65E5RJM6 399 aa11.43□□□□□ -0.58
FOXN4-201ENST00000299162 ACTN4O43707 911 aaKnown RBP11.43□□□□□ -0.58
FOXN4-201ENST00000299162 CYTH3O43739 400 aa11.43□□□□□ -0.58
FOXN4-201ENST00000299162 NRDCO43847 1150 aa11.43□□□□□ -0.58
FOXN4-201ENST00000299162 DDAH1O94760 285 aa11.43□□□□□ -0.58
FOXN4-201ENST00000299162 CD44P16070 742 aaKnown RBP11.43□□□□□ -0.58
FOXN4-201ENST00000299162 BLIDQ8IZY5 108 aa11.43□□□□□ -0.58
FOXN4-201ENST00000299162 TBC1D16Q8TBP0 767 aa11.43□□□□□ -0.58
FOXN4-201ENST00000299162 CEP95Q96GE4 821 aa11.43□□□□□ -0.58
FOXN4-201ENST00000299162 PAGE5Q96GU1 130 aa11.43□□□□□ -0.58
FOXN4-201ENST00000299162 BIN2Q9UBW5 565 aaPredicted RBP11.43□□□□□ -0.58
FOXN4-201ENST00000299162 TTF2Q9UNY4 1162 aaKnown RBP11.43□□□□□ -0.58
FOXN4-201ENST00000299162 TEX33O43247 280 aa11.42□□□□□ -0.58
FOXN4-201ENST00000299162 CUL4BQ13620 913 aa11.42□□□□□ -0.58
FOXN4-201ENST00000299162 NPY5RQ15761 445 aa11.42□□□□□ -0.58
FOXN4-201ENST00000299162 WWC2Q6AWC2 1192 aa11.42□□□□□ -0.58
FOXN4-201ENST00000299162 KIAA0825Q8IV33 1275 aa11.42□□□□□ -0.58
FOXN4-201ENST00000299162 ZC3H12CQ9C0D7 883 aaKnown RBP11.42□□□□□ -0.58
FOXN4-201ENST00000299162 DNAI1Q9UI46 699 aa11.42□□□□□ -0.58
FOXN4-201ENST00000299162 LTBP4Q8N2S1 1624 aa11.42□□□□□ -0.58
FOXN4-201ENST00000299162 C4AP0C0L4 1744 aa11.42□□□□□ -0.58
FOXN4-201ENST00000299162 C4BP0C0L5 1744 aa11.42□□□□□ -0.58
FOXN4-201ENST00000299162 ORC4O43929 436 aa11.42□□□□□ -0.58
FOXN4-201ENST00000299162 LDHCP07864 332 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms