RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 CEP89Q96ST8 783 aa10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 ARHGEF10LQ9HCE6 1279 aa10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 PCDHA1Q9Y5I3 950 aa10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 GNAQP50148 359 aa10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 FAM83BQ5T0W9 1011 aa10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 FBXO28Q9NVF7 368 aa10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 RBM28Q9NW13 759 aaKnown RBP10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 WNT10BO00744 389 aa10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 POLR2DO15514 142 aaKnown RBP10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 CASP1P29466 404 aa10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 RHBDL3P58872 404 aa10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 ALX1Q15699 326 aa10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 C9orf131Q5VYM1 1079 aa10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 GPIHBP1Q8IV16 184 aa10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 NOSTRINQ8IVI9 506 aa10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 MRPS27Q92552 414 aaKnown RBP10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 DCPSQ96C86 337 aaKnown RBP10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 C6orf50Q9HD87 102 aa10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 TMEM260Q9NX78 707 aa10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 COL22A1Q8NFW1 1626 aaPredicted RBP10.28□□□□□ -0.76
CCDC144B-201ENST00000285176 KIF23Q02241 960 aaPredicted RBP10.28□□□□□ -0.76
CCDC144B-201ENST00000285176 TSGA10IPQ3SY00 556 aa10.28□□□□□ -0.76
CCDC144B-201ENST00000285176 LUZP1Q86V48 1076 aa10.28□□□□□ -0.76
CCDC144B-201ENST00000285176 IL17RBQ9NRM6 502 aa10.28□□□□□ -0.76
CCDC144B-201ENST00000285176 PCDHA7Q9UN72 937 aa10.28□□□□□ -0.76
CCDC144B-201ENST00000285176 ZHX2Q9Y6X8 837 aa10.28□□□□□ -0.76
CCDC144B-201ENST00000285176 C4BP0C0L5 1744 aa10.28□□□□□ -0.76
CCDC144B-201ENST00000285176 IFNAR1P17181 557 aa10.28□□□□□ -0.76
CCDC144B-201ENST00000285176 ANO6Q4KMQ2 910 aa10.28□□□□□ -0.76
CCDC144B-201ENST00000285176 ZNF830Q96NB3 372 aaPredicted RBP10.28□□□□□ -0.76
CCDC144B-201ENST00000285176 DEFB129Q9H1M3 183 aa10.28□□□□□ -0.76
CCDC144B-201ENST00000285176 HACL1Q9UJ83 578 aa10.28□□□□□ -0.76
CCDC144B-201ENST00000285176 SIPA1L3O60292 1781 aaPredicted RBP10.28□□□□□ -0.76
CCDC144B-201ENST00000285176 SPDYE3A6NKU9 549 aa10.28□□□□□ -0.76
CCDC144B-201ENST00000285176 F5H6K3 240 aa10.28□□□□□ -0.76
CCDC144B-201ENST00000285176 MYCLP12524 364 aaPredicted RBP10.28□□□□□ -0.76
CCDC144B-201ENST00000285176 KLRC3Q07444 240 aa10.28□□□□□ -0.76
CCDC144B-201ENST00000285176 NBPF12Q5TAG4 269 aaPredicted RBP10.28□□□□□ -0.76
CCDC144B-201ENST00000285176 MAEAQ7L5Y9 396 aa10.28□□□□□ -0.76
CCDC144B-201ENST00000285176 RTEL1Q9NZ71 1219 aa10.28□□□□□ -0.76
CCDC144B-201ENST00000285176 A0A0U1RQG5 324 aaPredicted RBP10.27□□□□□ -0.76
CCDC144B-201ENST00000285176 FAM170AA1A519 330 aa10.27□□□□□ -0.76
CCDC144B-201ENST00000285176 XRCC6P12956 609 aaKnown RBP eCLIP10.27□□□□□ -0.76
CCDC144B-201ENST00000285176 INPP5BP32019 993 aa10.27□□□□□ -0.76
CCDC144B-201ENST00000285176 NAP1L1P55209 391 aaKnown RBP10.27□□□□□ -0.76
CCDC144B-201ENST00000285176 MNS1Q8NEH6 495 aa10.27□□□□□ -0.76
CCDC144B-201ENST00000285176 CUL5Q93034 780 aa10.27□□□□□ -0.76
CCDC144B-201ENST00000285176 BLZF1Q9H2G9 400 aa10.27□□□□□ -0.76
CCDC144B-201ENST00000285176 NWD2Q9ULI1 1742 aa10.27□□□□□ -0.77
CCDC144B-201ENST00000285176 CALML3P27482 149 aa10.27□□□□□ -0.77
CCDC144B-201ENST00000285176 TNFAIP1Q13829 316 aa10.27□□□□□ -0.77
CCDC144B-201ENST00000285176 FILIP1LQ4L180 1135 aa10.27□□□□□ -0.77
CCDC144B-201ENST00000285176 TTC38Q5R3I4 469 aa10.27□□□□□ -0.77
CCDC144B-201ENST00000285176 GADL1Q6ZQY3 521 aa10.27□□□□□ -0.77
CCDC144B-201ENST00000285176 SYT17Q9BSW7 474 aa10.27□□□□□ -0.77
CCDC144B-201ENST00000285176 FMNL1O95466 1100 aaPredicted RBP10.27□□□□□ -0.77
CCDC144B-201ENST00000285176 KRT26Q7Z3Y9 468 aa10.27□□□□□ -0.77
CCDC144B-201ENST00000285176 REXO1Q8N1G1 1221 aaKnown RBP10.27□□□□□ -0.77
CCDC144B-201ENST00000285176 ZNF165P49910 485 aa10.26□□□□□ -0.77
CCDC144B-201ENST00000285176 NDUFA8P51970 172 aa10.26□□□□□ -0.77
CCDC144B-201ENST00000285176 RESTQ13127 1097 aa10.26□□□□□ -0.77
CCDC144B-201ENST00000285176 PTGDRQ13258 359 aa10.26□□□□□ -0.77
CCDC144B-201ENST00000285176 SLC30A10Q6XR72 485 aa10.26□□□□□ -0.77
CCDC144B-201ENST00000285176 TMTC3Q6ZXV5 915 aa10.26□□□□□ -0.77
CCDC144B-201ENST00000285176 MOB2Q70IA6 237 aa10.26□□□□□ -0.77
CCDC144B-201ENST00000285176 EEPD1Q7L9B9 569 aa10.26□□□□□ -0.77
CCDC144B-201ENST00000285176 CCDC148Q8NFR7 591 aa10.26□□□□□ -0.77
CCDC144B-201ENST00000285176 GLIS2Q9BZE0 524 aaPredicted RBP10.26□□□□□ -0.77
CCDC144B-201ENST00000285176 RBSNQ9H1K0 784 aa10.26□□□□□ -0.77
CCDC144B-201ENST00000285176 SPDYE2BA6NHP3 402 aa10.26□□□□□ -0.77
CCDC144B-201ENST00000285176 OFD1O75665 1012 aa10.26□□□□□ -0.77
CCDC144B-201ENST00000285176 SPDYE6P0CI01 402 aa10.26□□□□□ -0.77
CCDC144B-201ENST00000285176 TROAPQ12815 778 aa10.26□□□□□ -0.77
CCDC144B-201ENST00000285176 KCNG4Q8TDN1 519 aa10.26□□□□□ -0.77
CCDC144B-201ENST00000285176 KANSL2Q9H9L4 492 aa10.26□□□□□ -0.77
CCDC144B-201ENST00000285176 RFX7Q2KHR2 1363 aa10.26□□□□□ -0.77
CCDC144B-201ENST00000285176 TECP42680 631 aa10.26□□□□□ -0.77
CCDC144B-201ENST00000285176 BLIDQ8IZY5 108 aa10.26□□□□□ -0.77
CCDC144B-201ENST00000285176 GOLGA6L1Q8N7Z2 621 aa10.26□□□□□ -0.77
CCDC144B-201ENST00000285176 CCDC12Q8WUD4 166 aaPredicted RBP10.26□□□□□ -0.77
CCDC144B-201ENST00000285176 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.26□□□□□ -0.77
CCDC144B-201ENST00000285176 MTMR4Q9NYA4 1195 aa10.26□□□□□ -0.77
CCDC144B-201ENST00000285176 SHANK3Q9BYB0 1731 aa10.26□□□□□ -0.77
CCDC144B-201ENST00000285176 NRAPQ86VF7 1730 aa10.26□□□□□ -0.77
CCDC144B-201ENST00000285176 NF2P35240 595 aa10.26□□□□□ -0.77
CCDC144B-201ENST00000285176 OTUD5Q96G74 571 aa10.26□□□□□ -0.77
CCDC144B-201ENST00000285176 PSTPIP2Q9H939 334 aa10.26□□□□□ -0.77
CCDC144B-201ENST00000285176 FAM198AQ9UFP1 575 aa10.26□□□□□ -0.77
CCDC144B-201ENST00000285176 CEP131Q9UPN4 1083 aa10.26□□□□□ -0.77
CCDC144B-201ENST00000285176 NFKBIEO00221 500 aa10.25□□□□□ -0.77
CCDC144B-201ENST00000285176 HMGCS2P54868 508 aa10.25□□□□□ -0.77
CCDC144B-201ENST00000285176 TGFB2P61812 414 aa10.25□□□□□ -0.77
CCDC144B-201ENST00000285176 ZSCAN30Q86W11 494 aa10.25□□□□□ -0.77
CCDC144B-201ENST00000285176 FAM177A1Q8N128 213 aaPredicted RBP10.25□□□□□ -0.77
CCDC144B-201ENST00000285176 EPSTI1Q96J88 318 aa10.25□□□□□ -0.77
CCDC144B-201ENST00000285176 DHX36Q9H2U1 1008 aaKnown RBP10.25□□□□□ -0.77
CCDC144B-201ENST00000285176 GNA11P29992 359 aa10.25□□□□□ -0.77
CCDC144B-201ENST00000285176 CYP4A11Q02928 519 aa10.25□□□□□ -0.77
CCDC144B-201ENST00000285176 PNOCQ13519 176 aa10.25□□□□□ -0.77
CCDC144B-201ENST00000285176 HHIPL2Q6UWX4 724 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms