RNA–Protein interactions for RNA: ENST00000272433.6

SFXN5-201, Transcript of sideroflexin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN5, Length 4,140 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-201ENST00000272433 NFE2L3Q9Y4A8 694 aa12.53□□□□□ -0.4
SFXN5-201ENST00000272433 PCDHA5Q9Y5H7 936 aa12.53□□□□□ -0.4
SFXN5-201ENST00000272433 RFX7Q2KHR2 1363 aa12.53□□□□□ -0.4
SFXN5-201ENST00000272433 TRIM21P19474 475 aaKnown RBP12.53□□□□□ -0.4
SFXN5-201ENST00000272433 SYMPKQ92797 1274 aaKnown RBP12.53□□□□□ -0.4
SFXN5-201ENST00000272433 CCDC17Q96LX7 622 aa12.53□□□□□ -0.4
SFXN5-201ENST00000272433 CTNND2Q9UQB3 1225 aa12.53□□□□□ -0.4
SFXN5-201ENST00000272433 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.53□□□□□ -0.4
SFXN5-201ENST00000272433 DGKHQ86XP1 1220 aa12.52□□□□□ -0.4
SFXN5-201ENST00000272433 EPSTI1Q96J88 318 aa12.52□□□□□ -0.4
SFXN5-201ENST00000272433 KANSL2Q9H9L4 492 aa12.52□□□□□ -0.4
SFXN5-201ENST00000272433 KIF28PB7ZC32 967 aa12.52□□□□□ -0.4
SFXN5-201ENST00000272433 TRAF1Q13077 416 aa12.52□□□□□ -0.4
SFXN5-201ENST00000272433 TMTC3Q6ZXV5 915 aa12.52□□□□□ -0.4
SFXN5-201ENST00000272433 SV2BQ7L1I2 683 aa12.52□□□□□ -0.4
SFXN5-201ENST00000272433 UQCRHLA0A096LP55 91 aa12.52□□□□□ -0.41
SFXN5-201ENST00000272433 FLOT1O75955 427 aa12.52□□□□□ -0.41
SFXN5-201ENST00000272433 UQCRHP07919 91 aa12.52□□□□□ -0.41
SFXN5-201ENST00000272433 DPEP1P16444 411 aa12.52□□□□□ -0.41
SFXN5-201ENST00000272433 TNFAIP1Q13829 316 aa12.52□□□□□ -0.41
SFXN5-201ENST00000272433 CABP7Q86V35 215 aa12.52□□□□□ -0.41
SFXN5-201ENST00000272433 FBXO11Q86XK2 927 aa12.52□□□□□ -0.41
SFXN5-201ENST00000272433 VGLL2Q8N8G2 317 aa12.52□□□□□ -0.41
SFXN5-201ENST00000272433 FAM205CA6NFA0 338 aa12.52□□□□□ -0.41
SFXN5-201ENST00000272433 URI1O94763 535 aaPredicted RBP12.52□□□□□ -0.41
SFXN5-201ENST00000272433 CTDNEP1O95476 244 aa12.52□□□□□ -0.41
SFXN5-201ENST00000272433 USP8P40818 1118 aa12.52□□□□□ -0.41
SFXN5-201ENST00000272433 ARID5AQ03989 594 aa12.52□□□□□ -0.41
SFXN5-201ENST00000272433 NEK8Q86SG6 692 aa12.52□□□□□ -0.41
SFXN5-201ENST00000272433 SMYD4Q8IYR2 804 aaPredicted RBP12.52□□□□□ -0.41
SFXN5-201ENST00000272433 FERMT2Q96AC1 680 aa12.52□□□□□ -0.41
SFXN5-201ENST00000272433 ZKSCAN5Q9Y2L8 839 aa12.52□□□□□ -0.41
SFXN5-201ENST00000272433 BACH1O14867 736 aa12.51□□□□□ -0.41
SFXN5-201ENST00000272433 CYP4A11Q02928 519 aa12.51□□□□□ -0.41
SFXN5-201ENST00000272433 SYCP1Q15431 976 aa12.51□□□□□ -0.41
SFXN5-201ENST00000272433 PRAMEF18Q5VWM3 479 aa12.51□□□□□ -0.41
SFXN5-201ENST00000272433 WWC2Q6AWC2 1192 aa12.51□□□□□ -0.41
SFXN5-201ENST00000272433 TBCKQ8TEA7 893 aa12.51□□□□□ -0.41
SFXN5-201ENST00000272433 FOXP1Q9H334 677 aaPredicted RBP12.51□□□□□ -0.41
SFXN5-201ENST00000272433 POLR3EQ9NVU0 708 aa12.51□□□□□ -0.41
SFXN5-201ENST00000272433 PRPF3O43395 683 aaKnown RBP12.51□□□□□ -0.41
SFXN5-201ENST00000272433 SRGNP10124 158 aa12.51□□□□□ -0.41
SFXN5-201ENST00000272433 CASP1P29466 404 aa12.51□□□□□ -0.41
SFXN5-201ENST00000272433 CCDC84Q86UT8 332 aaPredicted RBP12.51□□□□□ -0.41
SFXN5-201ENST00000272433 GOPCQ9HD26 462 aa12.51□□□□□ -0.41
SFXN5-201ENST00000272433 PPP1R12BO60237 982 aaPredicted RBP12.51□□□□□ -0.41
SFXN5-201ENST00000272433 FDPSP14324 419 aaKnown RBP12.51□□□□□ -0.41
SFXN5-201ENST00000272433 SLC51AQ86UW1 340 aa12.51□□□□□ -0.41
SFXN5-201ENST00000272433 KCNQ5Q9NR82 932 aa12.51□□□□□ -0.41
SFXN5-201ENST00000272433 HOXA13P31271 388 aaPredicted RBP12.5□□□□□ -0.41
SFXN5-201ENST00000272433 DPCR1Q3MIW9 517 aa12.5□□□□□ -0.41
SFXN5-201ENST00000272433 CHURC1Q8WUH1 139 aa12.5□□□□□ -0.41
SFXN5-201ENST00000272433 PAGR1Q9BTK6 254 aa12.5□□□□□ -0.41
SFXN5-201ENST00000272433 TMOD4Q9NZQ9 345 aa12.5□□□□□ -0.41
SFXN5-201ENST00000272433 FLT1P17948 1338 aa12.5□□□□□ -0.41
SFXN5-201ENST00000272433 FAM170AA1A519 330 aa12.5□□□□□ -0.41
SFXN5-201ENST00000272433 POLRMTO00411 1230 aaKnown RBP12.5□□□□□ -0.41
SFXN5-201ENST00000272433 NOLC1Q14978 699 aaKnown RBP eCLIP12.5□□□□□ -0.41
SFXN5-201ENST00000272433 GRIK5Q16478 980 aa12.5□□□□□ -0.41
SFXN5-201ENST00000272433 KRBA2Q6ZNG9 492 aa12.5□□□□□ -0.41
SFXN5-201ENST00000272433 SGMS1Q86VZ5 419 aa12.5□□□□□ -0.41
SFXN5-201ENST00000272433 SRBD1Q8N5C6 995 aaKnown RBP12.5□□□□□ -0.41
SFXN5-201ENST00000272433 ZNF397Q8NF99 534 aaPredicted RBP12.5□□□□□ -0.41
SFXN5-201ENST00000272433 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.5□□□□□ -0.411e-6■■■■■ 28
SFXN5-201ENST00000272433 DHX36Q9H2U1 1008 aaKnown RBP12.5□□□□□ -0.41
SFXN5-201ENST00000272433 ZSWIM4Q9H7M6 989 aa12.5□□□□□ -0.41
SFXN5-201ENST00000272433 SWAP70Q9UH65 585 aa12.5□□□□□ -0.41
SFXN5-201ENST00000272433 PCDHA12Q9UN75 941 aa12.5□□□□□ -0.41
SFXN5-201ENST00000272433 RPAP1Q9BWH6 1393 aaPredicted RBP12.5□□□□□ -0.41
SFXN5-201ENST00000272433 GSDMDP57764 484 aa12.5□□□□□ -0.41
SFXN5-201ENST00000272433 FANCCQ00597 558 aa12.5□□□□□ -0.41
SFXN5-201ENST00000272433 NFIAQ12857 509 aa12.5□□□□□ -0.41
SFXN5-201ENST00000272433 HERC4Q5GLZ8 1057 aaPredicted RBP12.5□□□□□ -0.41
SFXN5-201ENST00000272433 NELFCDQ8IXH7 590 aa12.5□□□□□ -0.41
SFXN5-201ENST00000272433 SETD1AO15047 1707 aaKnown RBP12.49□□□□□ -0.41
SFXN5-201ENST00000272433 NLRP12P59046 1061 aa12.49□□□□□ -0.41
SFXN5-201ENST00000272433 UBXN1Q04323 297 aa12.49□□□□□ -0.41
SFXN5-201ENST00000272433 LONRF3Q496Y0 759 aa12.49□□□□□ -0.41
SFXN5-201ENST00000272433 AMIGO3Q86WK7 504 aa12.49□□□□□ -0.41
SFXN5-201ENST00000272433 ZNF526Q8TF50 670 aaPredicted RBP12.49□□□□□ -0.41
SFXN5-201ENST00000272433 RIOK1Q9BRS2 568 aaKnown RBP12.49□□□□□ -0.41
SFXN5-201ENST00000272433 PCDHA4Q9UN74 947 aa12.49□□□□□ -0.41
SFXN5-201ENST00000272433 PLEKHG2Q9H7P9 1386 aa12.49□□□□□ -0.41
SFXN5-201ENST00000272433 TRAF5O00463 557 aa12.49□□□□□ -0.41
SFXN5-201ENST00000272433 EEF2P13639 858 aaKnown RBP12.49□□□□□ -0.41
SFXN5-201ENST00000272433 GPATCH4Q5T3I0 446 aaKnown RBP12.49□□□□□ -0.41
SFXN5-201ENST00000272433 TTBK2Q6IQ55 1244 aa12.49□□□□□ -0.41
SFXN5-201ENST00000272433 CDC42EP5Q6NZY7 148 aa12.49□□□□□ -0.41
SFXN5-201ENST00000272433 C11orf57Q6ZUT1 292 aaPredicted RBP12.49□□□□□ -0.41
SFXN5-201ENST00000272433 TICAM2Q86XR7 235 aa12.49□□□□□ -0.41
SFXN5-201ENST00000272433 KIF20AO95235 890 aa12.49□□□□□ -0.41
SFXN5-201ENST00000272433 BMP3P12645 472 aa12.49□□□□□ -0.41
SFXN5-201ENST00000272433 TPH2Q8IWU9 490 aa12.49□□□□□ -0.41
SFXN5-201ENST00000272433 USP17L15C9J2P7 530 aa12.48□□□□□ -0.41
SFXN5-201ENST00000272433 USP17L13C9JLJ4 530 aa12.48□□□□□ -0.41
SFXN5-201ENST00000272433 USP17L11C9JVI0 530 aa12.48□□□□□ -0.41
SFXN5-201ENST00000272433 USP17L18D6R9N7 530 aa12.48□□□□□ -0.41
SFXN5-201ENST00000272433 USP17L22D6RA61 530 aa12.48□□□□□ -0.41
SFXN5-201ENST00000272433 USP17L17D6RBQ6 530 aa12.48□□□□□ -0.41
SFXN5-201ENST00000272433 USP17L19D6RCP7 530 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms