RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 EPSTI1Q96J88 318 aa19.29■□□□□ 0.68
CHKA-201ENST00000265689 CPVLQ9H3G5 476 aa19.29■□□□□ 0.68
CHKA-201ENST00000265689 DDX4Q9NQI0 724 aaKnown RBP19.29■□□□□ 0.68
CHKA-201ENST00000265689 MYH1P12882 1939 aa19.29■□□□□ 0.68
CHKA-201ENST00000265689 PALM3A6NDB9 673 aaPredicted RBP19.28■□□□□ 0.68
CHKA-201ENST00000265689 G3V3G9 751 aa19.28■□□□□ 0.68
CHKA-201ENST00000265689 DCAF8Q5TAQ9 597 aa19.28■□□□□ 0.68
CHKA-201ENST00000265689 C7orf43Q8WVR3 580 aa19.28■□□□□ 0.68
CHKA-201ENST00000265689 CEP95Q96GE4 821 aa19.28■□□□□ 0.68
CHKA-201ENST00000265689 SUGT1Q9Y2Z0 365 aa19.28■□□□□ 0.68
CHKA-201ENST00000265689 R3HCC1Q9Y3T6 440 aaKnown RBP19.28■□□□□ 0.68
CHKA-201ENST00000265689 MORC2Q9Y6X9 1032 aaPredicted RBP19.28■□□□□ 0.68
CHKA-201ENST00000265689 A0A087X0B3 334 aa19.28■□□□□ 0.68
CHKA-201ENST00000265689 PTGDRQ13258 359 aa19.28■□□□□ 0.68
CHKA-201ENST00000265689 POSTNQ15063 836 aa19.28■□□□□ 0.68
CHKA-201ENST00000265689 TMX4Q9H1E5 349 aaPredicted RBP19.28■□□□□ 0.68
CHKA-201ENST00000265689 ACTN4O43707 911 aaKnown RBP19.27■□□□□ 0.68
CHKA-201ENST00000265689 WWC2Q6AWC2 1192 aa19.27■□□□□ 0.68
CHKA-201ENST00000265689 ELOA2Q8IYF1 753 aaPredicted RBP19.27■□□□□ 0.68
CHKA-201ENST00000265689 BLIDQ8IZY5 108 aa19.27■□□□□ 0.68
CHKA-201ENST00000265689 RASGRP4Q8TDF6 673 aa19.27■□□□□ 0.68
CHKA-201ENST00000265689 KLRF2D3W0D1 207 aa19.27■□□□□ 0.68
CHKA-201ENST00000265689 BMP15O95972 392 aa19.27■□□□□ 0.68
CHKA-201ENST00000265689 BMP6P22004 513 aa19.27■□□□□ 0.68
CHKA-201ENST00000265689 CALML3P27482 149 aa19.27■□□□□ 0.68
CHKA-201ENST00000265689 HEATR3Q7Z4Q2 680 aa19.27■□□□□ 0.68
CHKA-201ENST00000265689 SH3GLB2Q9NR46 395 aa19.27■□□□□ 0.68
CHKA-201ENST00000265689 USP40Q9NVE5 1235 aa19.27■□□□□ 0.68
CHKA-201ENST00000265689 STYK1Q6J9G0 422 aa19.26■□□□□ 0.67
CHKA-201ENST00000265689 USP17L2Q6R6M4 530 aa19.26■□□□□ 0.67
CHKA-201ENST00000265689 KIAA0825Q8IV33 1275 aa19.26■□□□□ 0.67
CHKA-201ENST00000265689 SYMPKQ92797 1274 aaKnown RBP19.26■□□□□ 0.67
CHKA-201ENST00000265689 HOOK1Q9UJC3 728 aaKnown RBP19.26■□□□□ 0.67
CHKA-201ENST00000265689 PCDHA4Q9UN74 947 aa19.26■□□□□ 0.67
CHKA-201ENST00000265689 SMTNL1A8MU46 457 aa19.26■□□□□ 0.67
CHKA-201ENST00000265689 MCM7P33993 719 aa19.26■□□□□ 0.67
CHKA-201ENST00000265689 ATP2C1P98194 919 aaPredicted RBP19.26■□□□□ 0.67
CHKA-201ENST00000265689 CACTINQ8WUQ7 758 aaKnown RBP19.26■□□□□ 0.67
CHKA-201ENST00000265689 FERMT2Q96AC1 680 aa19.26■□□□□ 0.67
CHKA-201ENST00000265689 DHX58Q96C10 678 aa19.26■□□□□ 0.67
CHKA-201ENST00000265689 ZNF277Q9NRM2 450 aaPredicted RBP19.26■□□□□ 0.67
CHKA-201ENST00000265689 SPTLC3Q9NUV7 552 aa19.26■□□□□ 0.67
CHKA-201ENST00000265689 MAN1B1Q9UKM7 699 aa19.26■□□□□ 0.67
CHKA-201ENST00000265689 C10orf71Q711Q0 1435 aa19.26■□□□□ 0.67
CHKA-201ENST00000265689 VWA3AA6NCI4 1184 aa19.25■□□□□ 0.67
CHKA-201ENST00000265689 CACNB3P54284 484 aa19.25■□□□□ 0.67
CHKA-201ENST00000265689 ARID5BQ14865 1188 aa19.25■□□□□ 0.67
CHKA-201ENST00000265689 UPF1Q92900 1129 aaKnown RBP eCLIP19.25■□□□□ 0.671e-7■■■■■ 27
CHKA-201ENST00000265689 IKBKBO14920 756 aa19.25■□□□□ 0.67
CHKA-201ENST00000265689 TOP1P11387 765 aaKnown RBP19.25■□□□□ 0.67
CHKA-201ENST00000265689 LMOD1P29536 600 aaPredicted RBP19.25■□□□□ 0.67
CHKA-201ENST00000265689 HSD3B7Q9H2F3 369 aa19.25■□□□□ 0.67
CHKA-201ENST00000265689 COL4A5P29400 1685 aa19.25■□□□□ 0.67
CHKA-201ENST00000265689 STXBP3O00186 592 aa19.24■□□□□ 0.67
CHKA-201ENST00000265689 PARP1P09874 1014 aaKnown RBP19.24■□□□□ 0.67
CHKA-201ENST00000265689 TRAPPC10P48553 1259 aa19.24■□□□□ 0.67
CHKA-201ENST00000265689 GABPAQ06546 454 aa19.24■□□□□ 0.67
CHKA-201ENST00000265689 CDC42EP5Q6NZY7 148 aa19.24■□□□□ 0.67
CHKA-201ENST00000265689 IFNKQ9P0W0 207 aa19.24■□□□□ 0.67
CHKA-201ENST00000265689 FOCADQ5VW36 1801 aa19.24■□□□□ 0.67
CHKA-201ENST00000265689 ECE2O60344 883 aa19.24■□□□□ 0.67
CHKA-201ENST00000265689 TPM4P67936 248 aa19.24■□□□□ 0.67
CHKA-201ENST00000265689 FILIP1Q7Z7B0 1213 aa19.24■□□□□ 0.67
CHKA-201ENST00000265689 XPO4Q9C0E2 1151 aaKnown RBP19.24■□□□□ 0.67
CHKA-201ENST00000265689 BARHL2Q9NY43 387 aa19.24■□□□□ 0.67
CHKA-201ENST00000265689 M0R2N6 131 aa19.23■□□□□ 0.67
CHKA-201ENST00000265689 SMC2O95347 1197 aa19.23■□□□□ 0.67
CHKA-201ENST00000265689 AKR1B1P15121 316 aa19.23■□□□□ 0.67
CHKA-201ENST00000265689 SARSP49591 514 aaKnown RBP19.23■□□□□ 0.67
CHKA-201ENST00000265689 IL17AQ16552 155 aa19.23■□□□□ 0.67
CHKA-201ENST00000265689 DNTTIP2Q5QJE6 756 aaKnown RBP19.23■□□□□ 0.67
CHKA-201ENST00000265689 APOBEC3HQ6NTF7 200 aaKnown RBP19.23■□□□□ 0.67
CHKA-201ENST00000265689 SMARCE1Q969G3 411 aa19.23■□□□□ 0.67
CHKA-201ENST00000265689 CNKSR1Q969H4 720 aa19.23■□□□□ 0.67
CHKA-201ENST00000265689 LZTS2Q9BRK4 669 aa19.23■□□□□ 0.67
CHKA-201ENST00000265689 YDJCA8MPS7 323 aa19.23■□□□□ 0.67
CHKA-201ENST00000265689 USP17L5A8MUK1 530 aa19.23■□□□□ 0.67
CHKA-201ENST00000265689 ATP1A3P13637 1013 aa19.23■□□□□ 0.67
CHKA-201ENST00000265689 NOVP48745 357 aa19.23■□□□□ 0.67
CHKA-201ENST00000265689 MYL5Q02045 173 aa19.23■□□□□ 0.67
CHKA-201ENST00000265689 CLEC10AQ8IUN9 316 aa19.23■□□□□ 0.67
CHKA-201ENST00000265689 TEKT1Q969V4 418 aa19.23■□□□□ 0.67
CHKA-201ENST00000265689 SPZ1Q9BXG8 430 aa19.23■□□□□ 0.67
CHKA-201ENST00000265689 PCDHA6Q9UN73 950 aa19.23■□□□□ 0.67
CHKA-201ENST00000265689 PCDHA8Q9Y5H6 950 aa19.23■□□□□ 0.67
CHKA-201ENST00000265689 EIF6P56537 245 aaKnown RBP19.22■□□□□ 0.67
CHKA-201ENST00000265689 NT5DC1Q5TFE4 455 aa19.22■□□□□ 0.67
CHKA-201ENST00000265689 KANK3Q6NY19 840 aa19.22■□□□□ 0.67
CHKA-201ENST00000265689 HOMER1Q86YM7 354 aa19.22■□□□□ 0.67
CHKA-201ENST00000265689 TTLL6Q8N841 843 aa19.22■□□□□ 0.67
CHKA-201ENST00000265689 VAT1LQ9HCJ6 419 aa19.22■□□□□ 0.67
CHKA-201ENST00000265689 AFMP43652 599 aa19.22■□□□□ 0.67
CHKA-201ENST00000265689 HHIPL2Q6UWX4 724 aa19.22■□□□□ 0.67
CHKA-201ENST00000265689 MTMR4Q9NYA4 1195 aa19.22■□□□□ 0.67
CHKA-201ENST00000265689 PPIP5K2O43314 1243 aa19.21■□□□□ 0.67
CHKA-201ENST00000265689 NFIAQ12857 509 aa19.21■□□□□ 0.67
CHKA-201ENST00000265689 PODNQ7Z5L7 613 aa19.21■□□□□ 0.67
CHKA-201ENST00000265689 LRRC8AQ8IWT6 810 aa19.21■□□□□ 0.67
CHKA-201ENST00000265689 CCDC148Q8NFR7 591 aa19.21■□□□□ 0.67
CHKA-201ENST00000265689 UBA5Q9GZZ9 404 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms