RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 PPP6R2O75170 966 aa26.88■■□□□ 1.89
SYNGR3-201ENST00000248121 LMNB1P20700 586 aa26.88■■□□□ 1.89
SYNGR3-201ENST00000248121 NPY5RQ15761 445 aa26.88■■□□□ 1.89
SYNGR3-201ENST00000248121 CCDC178Q5BJE1 867 aa26.88■■□□□ 1.89
SYNGR3-201ENST00000248121 CSRNP1Q96S65 589 aa26.88■■□□□ 1.89
SYNGR3-201ENST00000248121 VEGFAP15692 232 aaPredicted RBP26.87■■□□□ 1.89
SYNGR3-201ENST00000248121 RRP1BQ14684 758 aaKnown RBP26.87■■□□□ 1.89
SYNGR3-201ENST00000248121 STAG2Q8N3U4 1231 aa26.87■■□□□ 1.89
SYNGR3-201ENST00000248121 RPS12P25398 132 aaKnown RBP26.86■■□□□ 1.89
SYNGR3-201ENST00000248121 GRM4Q14833 912 aa26.86■■□□□ 1.89
SYNGR3-201ENST00000248121 TBC1D10BQ4KMP7 808 aaPredicted RBP26.86■■□□□ 1.89
SYNGR3-201ENST00000248121 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.86■■□□□ 1.89
SYNGR3-201ENST00000248121 CNOT7Q9UIV1 285 aaKnown RBP26.86■■□□□ 1.89
SYNGR3-201ENST00000248121 KINO60870 393 aaKnown RBP26.86■■□□□ 1.89
SYNGR3-201ENST00000248121 CMA1P23946 247 aa26.86■■□□□ 1.89
SYNGR3-201ENST00000248121 NOVP48745 357 aa26.86■■□□□ 1.89
SYNGR3-201ENST00000248121 JAG1P78504 1218 aa26.86■■□□□ 1.89
SYNGR3-201ENST00000248121 MTMR4Q9NYA4 1195 aa26.86■■□□□ 1.89
SYNGR3-201ENST00000248121 MAD2L2Q9UI95 211 aa26.86■■□□□ 1.89
SYNGR3-201ENST00000248121 MPHOSPH10O00566 681 aaKnown RBP26.85■■□□□ 1.89
SYNGR3-201ENST00000248121 XBP1P17861 261 aa26.85■■□□□ 1.89
SYNGR3-201ENST00000248121 KIF5BP33176 963 aa26.85■■□□□ 1.89
SYNGR3-201ENST00000248121 SLC35G1Q2M3R5 365 aa26.85■■□□□ 1.89
SYNGR3-201ENST00000248121 CTAGE5O15320 804 aa26.85■■□□□ 1.89
SYNGR3-201ENST00000248121 GDF11O95390 407 aa26.85■■□□□ 1.89
SYNGR3-201ENST00000248121 EARS2Q5JPH6 523 aaKnown RBP26.85■■□□□ 1.89
SYNGR3-201ENST00000248121 LRRC47Q8N1G4 583 aaKnown RBP26.85■■□□□ 1.89
SYNGR3-201ENST00000248121 FAM151AQ8WW52 585 aa26.85■■□□□ 1.89
SYNGR3-201ENST00000248121 FAM205CA6NFA0 338 aa26.84■■□□□ 1.89
SYNGR3-201ENST00000248121 RILPL1Q5EBL4 403 aa26.84■■□□□ 1.89
SYNGR3-201ENST00000248121 TATDN1Q6P1N9 297 aa26.84■■□□□ 1.89
SYNGR3-201ENST00000248121 SHC4Q6S5L8 630 aa26.84■■□□□ 1.89
SYNGR3-201ENST00000248121 METTL16Q86W50 562 aaKnown RBP26.84■■□□□ 1.89
SYNGR3-201ENST00000248121 SCG2P13521 617 aa26.83■■□□□ 1.89
SYNGR3-201ENST00000248121 PFKFB1P16118 471 aa26.83■■□□□ 1.89
SYNGR3-201ENST00000248121 PFKFB3Q16875 520 aaPredicted RBP26.83■■□□□ 1.89
SYNGR3-201ENST00000248121 ANO6Q4KMQ2 910 aa26.83■■□□□ 1.89
SYNGR3-201ENST00000248121 DPF2Q92785 391 aa26.83■■□□□ 1.89
SYNGR3-201ENST00000248121 USP25Q9UHP3 1055 aa26.83■■□□□ 1.89
SYNGR3-201ENST00000248121 FAM200AQ8TCP9 573 aa26.83■■□□□ 1.89
SYNGR3-201ENST00000248121 PIBF1Q8WXW3 757 aa26.83■■□□□ 1.89
SYNGR3-201ENST00000248121 TNFRSF25Q93038 417 aa26.83■■□□□ 1.89
SYNGR3-201ENST00000248121 TRIM44Q96DX7 344 aaPredicted RBP26.83■■□□□ 1.89
SYNGR3-201ENST00000248121 CLIC6Q96NY7 704 aa26.83■■□□□ 1.89
SYNGR3-201ENST00000248121 CABP5Q9NP86 173 aa26.83■■□□□ 1.89
SYNGR3-201ENST00000248121 RTN4Q9NQC3 1192 aaKnown RBP26.83■■□□□ 1.89
SYNGR3-201ENST00000248121 PGAP2Q9UHJ9 254 aa26.83■■□□□ 1.89
SYNGR3-201ENST00000248121 PCDHB6Q9Y5E3 794 aa26.83■■□□□ 1.89
SYNGR3-201ENST00000248121 GOLGA8HP0CJ92 632 aa26.82■■□□□ 1.88
SYNGR3-201ENST00000248121 KRT2P35908 639 aa26.82■■□□□ 1.88
SYNGR3-201ENST00000248121 CERKLQ49MI3 558 aaPredicted RBP26.82■■□□□ 1.88
SYNGR3-201ENST00000248121 SASS6Q6UVJ0 657 aa26.82■■□□□ 1.88
SYNGR3-201ENST00000248121 JMYQ8N9B5 988 aa26.82■■□□□ 1.88
SYNGR3-201ENST00000248121 CPVLQ9H3G5 476 aa26.82■■□□□ 1.88
SYNGR3-201ENST00000248121 FOXP4Q8IVH2 680 aaPredicted RBP26.81■■□□□ 1.88
SYNGR3-201ENST00000248121 RRAGDQ9NQL2 400 aaPredicted RBP26.81■■□□□ 1.88
SYNGR3-201ENST00000248121 HPSEQ9Y251 543 aa26.81■■□□□ 1.88
SYNGR3-201ENST00000248121 MYO1BO43795 1136 aa26.81■■□□□ 1.88
SYNGR3-201ENST00000248121 TOP1P11387 765 aaKnown RBP26.81■■□□□ 1.88
SYNGR3-201ENST00000248121 NOM1Q5C9Z4 860 aaKnown RBP26.81■■□□□ 1.88
SYNGR3-201ENST00000248121 FAM43AQ8N2R8 423 aa26.81■■□□□ 1.88
SYNGR3-201ENST00000248121 TRIM34Q9BYJ4 488 aa26.81■■□□□ 1.88
SYNGR3-201ENST00000248121 PALM3A6NDB9 673 aaPredicted RBP26.8■■□□□ 1.88
SYNGR3-201ENST00000248121 CYTH3O43739 400 aa26.8■■□□□ 1.88
SYNGR3-201ENST00000248121 ZNF202O95125 648 aa26.8■■□□□ 1.88
SYNGR3-201ENST00000248121 KIF4BQ2VIQ3 1234 aa26.8■■□□□ 1.88
SYNGR3-201ENST00000248121 TRPM4Q8TD43 1214 aa26.8■■□□□ 1.88
SYNGR3-201ENST00000248121 ERCC4Q92889 916 aaPredicted RBP26.8■■□□□ 1.88
SYNGR3-201ENST00000248121 RNF181Q9P0P0 153 aa26.8■■□□□ 1.88
SYNGR3-201ENST00000248121 CLIP2Q9UDT6 1046 aa26.8■■□□□ 1.88
SYNGR3-201ENST00000248121 FAM237AA0A1B0GTK4 181 aa26.8■■□□□ 1.88
SYNGR3-201ENST00000248121 ADAMTS3O15072 1205 aa26.8■■□□□ 1.88
SYNGR3-201ENST00000248121 AP5Z1O43299 807 aa26.8■■□□□ 1.88
SYNGR3-201ENST00000248121 FKBP1CQ5VVH2 108 aa26.8■■□□□ 1.88
SYNGR3-201ENST00000248121 USP17L2Q6R6M4 530 aa26.8■■□□□ 1.88
SYNGR3-201ENST00000248121 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.79■■□□□ 1.88
SYNGR3-201ENST00000248121 RESP18Q5W5W9 173 aa26.79■■□□□ 1.88
SYNGR3-201ENST00000248121 MIGA2Q7L4E1 593 aa26.79■■□□□ 1.88
SYNGR3-201ENST00000248121 DNAJC25Q9H1X3 360 aa26.79■■□□□ 1.88
SYNGR3-201ENST00000248121 CBX8Q9HC52 389 aa26.79■■□□□ 1.88
SYNGR3-201ENST00000248121 USP17L5A8MUK1 530 aa26.78■■□□□ 1.88
SYNGR3-201ENST00000248121 CUTAO60888 179 aa26.78■■□□□ 1.88
SYNGR3-201ENST00000248121 SEPT2Q15019 361 aa26.78■■□□□ 1.88
SYNGR3-201ENST00000248121 LUZP1Q86V48 1076 aa26.78■■□□□ 1.88
SYNGR3-201ENST00000248121 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.78■■□□□ 1.88
SYNGR3-201ENST00000248121 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.78■■□□□ 1.88
SYNGR3-201ENST00000248121 TTLL1O95922 423 aa26.78■■□□□ 1.88
SYNGR3-201ENST00000248121 GNAQP50148 359 aa26.78■■□□□ 1.88
SYNGR3-201ENST00000248121 ATP2B2Q01814 1243 aa26.78■■□□□ 1.88
SYNGR3-201ENST00000248121 GRIN1Q05586 938 aa26.78■■□□□ 1.88
SYNGR3-201ENST00000248121 FAM83AQ86UY5 434 aa26.78■■□□□ 1.88
SYNGR3-201ENST00000248121 HACL1Q9UJ83 578 aa26.78■■□□□ 1.88
SYNGR3-201ENST00000248121 FBXO2Q9UK22 296 aaPredicted RBP26.78■■□□□ 1.88
SYNGR3-201ENST00000248121 A0A087WWV3 80 aa26.77■■□□□ 1.88
SYNGR3-201ENST00000248121 WNT7AO00755 349 aa26.77■■□□□ 1.88
SYNGR3-201ENST00000248121 DDNO94850 711 aaPredicted RBP26.77■■□□□ 1.88
SYNGR3-201ENST00000248121 EPS15P42566 896 aa26.77■■□□□ 1.88
SYNGR3-201ENST00000248121 RASA3Q14644 834 aa26.77■■□□□ 1.88
SYNGR3-201ENST00000248121 GPC2Q8N158 579 aa26.77■■□□□ 1.88
SYNGR3-201ENST00000248121 KRI1Q8N9T8 703 aaKnown RBP26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms