RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 ATP2C1P98194 919 aaPredicted RBP10.36□□□□□ -0.75
SYDE2-201ENST00000234668 SH3RF1Q7Z6J0 888 aa10.36□□□□□ -0.75
SYDE2-201ENST00000234668 CDCA7Q9BWT1 371 aaPredicted RBP10.36□□□□□ -0.75
SYDE2-201ENST00000234668 UBA5Q9GZZ9 404 aa10.36□□□□□ -0.75
SYDE2-201ENST00000234668 KCND1Q9NSA2 647 aa10.36□□□□□ -0.75
SYDE2-201ENST00000234668 CCNL1Q9UK58 526 aaPredicted RBP10.36□□□□□ -0.75
SYDE2-201ENST00000234668 ECM29Q5VYK3 1845 aa10.36□□□□□ -0.75
SYDE2-201ENST00000234668 ANKRD36CQ5JPF3 1778 aa10.36□□□□□ -0.75
SYDE2-201ENST00000234668 A0A1B0GTH6 734 aa10.36□□□□□ -0.75
SYDE2-201ENST00000234668 LDHBP07195 334 aaKnown RBP10.36□□□□□ -0.75
SYDE2-201ENST00000234668 TSPY3P0CV98 308 aa10.36□□□□□ -0.75
SYDE2-201ENST00000234668 TSPY8P0CW00 308 aa10.36□□□□□ -0.75
SYDE2-201ENST00000234668 PMS1P54277 932 aaKnown RBP10.36□□□□□ -0.75
SYDE2-201ENST00000234668 KRT31Q15323 416 aa10.36□□□□□ -0.75
SYDE2-201ENST00000234668 PFKFB3Q16875 520 aaPredicted RBP10.36□□□□□ -0.75
SYDE2-201ENST00000234668 USP17L2Q6R6M4 530 aa10.36□□□□□ -0.75
SYDE2-201ENST00000234668 BLIDQ8IZY5 108 aa10.36□□□□□ -0.75
SYDE2-201ENST00000234668 IQUBQ8NA54 791 aa10.36□□□□□ -0.75
SYDE2-201ENST00000234668 HPS3Q969F9 1004 aa10.36□□□□□ -0.75
SYDE2-201ENST00000234668 ADD3Q9UEY8 706 aaKnown RBP10.36□□□□□ -0.75
SYDE2-201ENST00000234668 F8W031 263 aaPredicted RBP10.36□□□□□ -0.75
SYDE2-201ENST00000234668 POLR3GO15318 223 aaPredicted RBP10.36□□□□□ -0.75
SYDE2-201ENST00000234668 CLEC10AQ8IUN9 316 aa10.36□□□□□ -0.75
SYDE2-201ENST00000234668 LRRC15Q8TF66 581 aa10.36□□□□□ -0.75
SYDE2-201ENST00000234668 NELFBQ8WX92 580 aa10.36□□□□□ -0.75
SYDE2-201ENST00000234668 FERMT2Q96AC1 680 aa10.36□□□□□ -0.75
SYDE2-201ENST00000234668 NARFQ9UHQ1 456 aa10.36□□□□□ -0.75
SYDE2-201ENST00000234668 DDX60Q8IY21 1712 aaKnown RBP10.36□□□□□ -0.75
SYDE2-201ENST00000234668 NKRFO15226 690 aaKnown RBP eCLIP10.35□□□□□ -0.75
SYDE2-201ENST00000234668 STX10O60499 249 aa10.35□□□□□ -0.75
SYDE2-201ENST00000234668 DDAH1O94760 285 aa10.35□□□□□ -0.75
SYDE2-201ENST00000234668 CALM1P0DP23 149 aa10.35□□□□□ -0.75
SYDE2-201ENST00000234668 CALM2P0DP24 149 aa10.35□□□□□ -0.75
SYDE2-201ENST00000234668 CALM3P0DP25 149 aa10.35□□□□□ -0.75
SYDE2-201ENST00000234668 ERCC5P28715 1186 aaPredicted RBP10.35□□□□□ -0.75
SYDE2-201ENST00000234668 STAT6P42226 847 aa10.35□□□□□ -0.75
SYDE2-201ENST00000234668 PRCPP42785 496 aa10.35□□□□□ -0.75
SYDE2-201ENST00000234668 E2F4Q16254 413 aa10.35□□□□□ -0.75
SYDE2-201ENST00000234668 ZNF444Q8N0Y2 327 aaPredicted RBP10.35□□□□□ -0.75
SYDE2-201ENST00000234668 ZCCHC17Q9NP64 241 aaKnown RBP10.35□□□□□ -0.75
SYDE2-201ENST00000234668 ATP8A2Q9NTI2 1148 aa10.35□□□□□ -0.75
SYDE2-201ENST00000234668 THRAP3Q9Y2W1 955 aaKnown RBP10.35□□□□□ -0.75
SYDE2-201ENST00000234668 RTCBQ9Y3I0 505 aaKnown RBP10.35□□□□□ -0.75
SYDE2-201ENST00000234668 MORC2Q9Y6X9 1032 aaPredicted RBP10.35□□□□□ -0.75
SYDE2-201ENST00000234668 CHD4Q14839 1912 aa10.35□□□□□ -0.75
SYDE2-201ENST00000234668 NID2Q14112 1375 aa10.35□□□□□ -0.75
SYDE2-201ENST00000234668 CCDC194A0A1B0GVG4 234 aa10.35□□□□□ -0.75
SYDE2-201ENST00000234668 GYPCP04921 128 aa10.35□□□□□ -0.75
SYDE2-201ENST00000234668 FGRP09769 529 aa10.35□□□□□ -0.75
SYDE2-201ENST00000234668 ZNF569Q5MCW4 686 aa10.35□□□□□ -0.75
SYDE2-201ENST00000234668 WWC2Q6AWC2 1192 aa10.35□□□□□ -0.75
SYDE2-201ENST00000234668 PDXDC2PQ6P474 469 aa10.35□□□□□ -0.75
SYDE2-201ENST00000234668 TRIML1Q8N9V2 468 aa10.35□□□□□ -0.75
SYDE2-201ENST00000234668 NUP88Q99567 741 aaPredicted RBP10.35□□□□□ -0.75
SYDE2-201ENST00000234668 CHP1Q99653 195 aa10.35□□□□□ -0.75
SYDE2-201ENST00000234668 ERICH4A6NGS2 130 aa10.34□□□□□ -0.75
SYDE2-201ENST00000234668 ORC4O43929 436 aa10.34□□□□□ -0.75
SYDE2-201ENST00000234668 NPM3O75607 178 aaKnown RBP10.34□□□□□ -0.75
SYDE2-201ENST00000234668 RFC4P35249 363 aa10.34□□□□□ -0.75
SYDE2-201ENST00000234668 LETM2Q2VYF4 491 aa10.34□□□□□ -0.75
SYDE2-201ENST00000234668 C12orf60Q5U649 245 aa10.34□□□□□ -0.75
SYDE2-201ENST00000234668 CCDC34Q96HJ3 373 aa10.34□□□□□ -0.75
SYDE2-201ENST00000234668 GSDMAQ96QA5 445 aa10.34□□□□□ -0.75
SYDE2-201ENST00000234668 SLF1Q9BQI6 1058 aa10.34□□□□□ -0.75
SYDE2-201ENST00000234668 TRIM10Q9UDY6 481 aa10.34□□□□□ -0.75
SYDE2-201ENST00000234668 TADA3O75528 432 aa10.34□□□□□ -0.75
SYDE2-201ENST00000234668 RPN1P04843 607 aaKnown RBP10.34□□□□□ -0.75
SYDE2-201ENST00000234668 PPP2R5BQ15173 497 aa10.34□□□□□ -0.75
SYDE2-201ENST00000234668 SLC10A5Q5PT55 438 aa10.34□□□□□ -0.75
SYDE2-201ENST00000234668 KRT222Q8N1A0 295 aa10.34□□□□□ -0.75
SYDE2-201ENST00000234668 TMEM47Q9BQJ4 181 aa10.34□□□□□ -0.75
SYDE2-201ENST00000234668 MTA3Q9BTC8 594 aa10.34□□□□□ -0.75
SYDE2-201ENST00000234668 MAD2L2Q9UI95 211 aa10.34□□□□□ -0.75
SYDE2-201ENST00000234668 ADGRG1Q9Y653 693 aa10.34□□□□□ -0.75
SYDE2-201ENST00000234668 CACNA1SQ13698 1873 aa10.34□□□□□ -0.75
SYDE2-201ENST00000234668 RPS6KA4O75676 772 aa10.33□□□□□ -0.75
SYDE2-201ENST00000234668 H2AFXP16104 143 aaPredicted RBP10.33□□□□□ -0.75
SYDE2-201ENST00000234668 RCAN1P53805 252 aa10.33□□□□□ -0.75
SYDE2-201ENST00000234668 UBXN1Q04323 297 aa10.33□□□□□ -0.75
SYDE2-201ENST00000234668 PPP2R3AQ06190 1150 aa10.33□□□□□ -0.75
SYDE2-201ENST00000234668 JAKMIP3Q5VZ66 844 aa10.33□□□□□ -0.75
SYDE2-201ENST00000234668 FAM196AQ6ZSG2 479 aa10.33□□□□□ -0.75
SYDE2-201ENST00000234668 C4orf32Q8N8J7 132 aa10.33□□□□□ -0.75
SYDE2-201ENST00000234668 RGS22Q8NE09 1264 aa10.33□□□□□ -0.75
SYDE2-201ENST00000234668 GJA10Q969M2 543 aa10.33□□□□□ -0.75
SYDE2-201ENST00000234668 HINFPQ9BQA5 517 aa10.33□□□□□ -0.75
SYDE2-201ENST00000234668 ARPP21Q9UBL0 812 aaPredicted RBP10.33□□□□□ -0.75
SYDE2-201ENST00000234668 LRP5O75197 1615 aa10.33□□□□□ -0.76
SYDE2-201ENST00000234668 PHLPP2Q6ZVD8 1323 aa10.33□□□□□ -0.76
SYDE2-201ENST00000234668 UBA7P41226 1012 aa10.33□□□□□ -0.76
SYDE2-201ENST00000234668 KCNJ6P48051 423 aa10.33□□□□□ -0.76
SYDE2-201ENST00000234668 ERVK-24P63145 666 aa10.33□□□□□ -0.76
SYDE2-201ENST00000234668 PICALMQ13492 652 aa10.33□□□□□ -0.76
SYDE2-201ENST00000234668 FILIP1LQ4L180 1135 aa10.33□□□□□ -0.76
SYDE2-201ENST00000234668 CDKAL1Q5VV42 579 aa10.33□□□□□ -0.76
SYDE2-201ENST00000234668 DTHD1Q6ZMT9 781 aa10.33□□□□□ -0.76
SYDE2-201ENST00000234668 ANKRD2Q9GZV1 360 aa10.33□□□□□ -0.76
SYDE2-201ENST00000234668 RNF216Q9NWF9 866 aaPredicted RBP10.33□□□□□ -0.76
SYDE2-201ENST00000234668 PCDHA6Q9UN73 950 aa10.33□□□□□ -0.76
SYDE2-201ENST00000234668 PCDHA8Q9Y5H6 950 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms