RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 MYLIPQ8WY64 445 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 TINF2Q9BSI4 451 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 AP5M1Q9H0R1 490 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 ABHD16BQ9H3Z7 469 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 KANSL2Q9H9L4 492 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 ATP8A2Q9NTI2 1148 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 TBX21Q9UL17 535 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 SPDYE16A6NNV3 312 aaPredicted RBP2.77□□□□□ -1.97
PRKD3-201ENST00000234179 FGBP02675 491 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 RPLP2P05387 115 aaKnown RBP2.77□□□□□ -1.97
PRKD3-201ENST00000234179 VCAM1P19320 739 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 GRIK5Q16478 980 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 TRIM60Q495X7 471 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 BADQ92934 168 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 MMP19Q99542 508 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 TEX13BQ9BXU2 312 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 POLR3DP05423 398 aaPredicted RBP2.77□□□□□ -1.97
PRKD3-201ENST00000234179 ADORA2AP29274 412 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 ADCYAP1R1P41586 468 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 TRAF1Q13077 416 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 OS9Q13438 667 aaPredicted RBP2.77□□□□□ -1.97
PRKD3-201ENST00000234179 BFSP2Q13515 415 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 GIMAP6Q6P9H5 292 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 RPAP2Q8IXW5 612 aaPredicted RBP2.77□□□□□ -1.97
PRKD3-201ENST00000234179 NEUROD6Q96NK8 337 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 MOV10L1Q9BXT6 1211 aaKnown RBP2.77□□□□□ -1.97
PRKD3-201ENST00000234179 VCPKMTQ9H867 229 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 DDX4Q9NQI0 724 aaKnown RBP2.77□□□□□ -1.97
PRKD3-201ENST00000234179 EMILIN3Q9NT22 766 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 PRKAG3Q9UGI9 489 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 PIEZO1Q92508 2521 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 TTC28Q96AY4 2481 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 MYH13Q9UKX3 1938 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 ARVCFO00192 962 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 SRGAP3O43295 1099 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 HMMRO75330 724 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 SLC3A2P08195 630 aaKnown RBP2.76□□□□□ -1.97
PRKD3-201ENST00000234179 CCND3P30281 292 aaPredicted RBP2.76□□□□□ -1.97
PRKD3-201ENST00000234179 ACLYP53396 1101 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 GJA9P57773 515 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 NBPF20Q3BBV1 942 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 FAM160B2Q86V87 743 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 RETREG2Q8NC44 543 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 PPP2R3CQ969Q6 453 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 FAM212AQ96EL1 285 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 DDX11Q96FC9 970 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 RPAP3Q9H6T3 665 aaPredicted RBP2.76□□□□□ -1.97
PRKD3-201ENST00000234179 TMX2Q9Y320 296 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 GH2P01242 217 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 STAT3P40763 770 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 PTPROQ16827 1216 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 MAML3Q96JK9 1138 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 POP1Q99575 1024 aaKnown RBP2.76□□□□□ -1.97
PRKD3-201ENST00000234179 SLC4A7Q9Y6M7 1214 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 AK9Q5TCS8 1911 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 ERCC3P19447 782 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 CYP7A1P22680 504 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 TIGD5Q53EQ6 642 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 MIER1Q8N108 512 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 KLHDC9Q8NEP7 349 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 LMAN2LQ9H0V9 348 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 PORCNQ9H237 461 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 VTA1Q9NP79 307 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 ADD3Q9UEY8 706 aaKnown RBP2.76□□□□□ -1.97
PRKD3-201ENST00000234179 NOP58Q9Y2X3 529 aaKnown RBP2.76□□□□□ -1.97
PRKD3-201ENST00000234179 RWDD3Q9Y3V2 267 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 PTPRFP10586 1907 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 A0A1W2PQ45 241 aaPredicted RBP2.76□□□□□ -1.97
PRKD3-201ENST00000234179 A0A1W2PQY0 241 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 CARNS1A5YM72 827 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 PRR33A8MZF0 331 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 FLOT1O75955 427 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 ATN1P54259 1190 aaPredicted RBP2.76□□□□□ -1.97
PRKD3-201ENST00000234179 ICA1Q05084 483 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 CSPP1Q1MSJ5 1256 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 NCAPG2Q86XI2 1143 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 CHURC1Q8WUH1 139 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 MFSD14AQ96MC6 490 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 NYAP2Q9P242 653 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 PPP1R9AQ9ULJ8 1098 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 ADAMTS5Q9UNA0 930 aa2.76□□□□□ -1.97
PRKD3-201ENST00000234179 USP17L12C9JPN9 530 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 USP17L21D6R901 530 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 PLA2G6O60733 806 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 CNMDO75829 334 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 GNAT2P19087 354 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 GSE1Q14687 1217 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 IQSEC1Q6DN90 963 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 MAPKAPK5Q8IW41 473 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 ZFPM1Q8IX07 1006 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 TGFBRAP1Q8WUH2 860 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 TTYH1Q9H313 450 aaPredicted RBP2.75□□□□□ -1.97
PRKD3-201ENST00000234179 TXNRD2Q9NNW7 524 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 CYP2E1P05181 493 aaPredicted RBP2.75□□□□□ -1.97
PRKD3-201ENST00000234179 KCNJ6P48051 423 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 CDK7P50613 346 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 ZNF792Q3KQV3 632 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 PRPF38AQ8NAV1 312 aaKnown RBP2.75□□□□□ -1.97
PRKD3-201ENST00000234179 SLC43A3Q8NBI5 491 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 CAGE1Q8TC20 777 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms