RNA–Protein interactions for RNA: ENST00000230461.10

TMEM30A-201, Transcript of transmembrane protein 30A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM30A, Length 4,594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM30A-201ENST00000230461 ZNF609O15014 1411 aa17.73■□□□□ 0.43
TMEM30A-201ENST00000230461 PCDHA12Q9UN75 941 aa17.73■□□□□ 0.43
TMEM30A-201ENST00000230461 ATP6V0A2Q9Y487 856 aa17.73■□□□□ 0.43
TMEM30A-201ENST00000230461 TNS2Q63HR2 1409 aa17.73■□□□□ 0.43
TMEM30A-201ENST00000230461 CETN2P41208 172 aa17.73■□□□□ 0.43
TMEM30A-201ENST00000230461 PAK1Q13153 545 aa17.73■□□□□ 0.43
TMEM30A-201ENST00000230461 NR5A1Q13285 461 aa17.73■□□□□ 0.43
TMEM30A-201ENST00000230461 AOC3Q16853 763 aa17.73■□□□□ 0.43
TMEM30A-201ENST00000230461 KCTD1Q719H9 257 aa17.73■□□□□ 0.43
TMEM30A-201ENST00000230461 NT5C3AQ9H0P0 336 aa17.73■□□□□ 0.43
TMEM30A-201ENST00000230461 PCDHA4Q9UN74 947 aa17.73■□□□□ 0.43
TMEM30A-201ENST00000230461 MYO3BQ8WXR4 1341 aa17.73■□□□□ 0.43
TMEM30A-201ENST00000230461 GCOM1H8Y6P7 765 aaPredicted RBP17.72■□□□□ 0.43
TMEM30A-201ENST00000230461 IGSF3O75054 1194 aa17.72■□□□□ 0.43
TMEM30A-201ENST00000230461 FOSP01100 380 aaPredicted RBP17.72■□□□□ 0.43
TMEM30A-201ENST00000230461 POLR2MP0CAP2 368 aa17.72■□□□□ 0.43
TMEM30A-201ENST00000230461 RESTQ13127 1097 aa17.72■□□□□ 0.43
TMEM30A-201ENST00000230461 PNOCQ13519 176 aa17.72■□□□□ 0.43
TMEM30A-201ENST00000230461 PNMA2Q9UL42 364 aa17.72■□□□□ 0.43
TMEM30A-201ENST00000230461 DKC1O60832 514 aaKnown RBP eCLIP17.72■□□□□ 0.43
TMEM30A-201ENST00000230461 CTR9Q6PD62 1173 aa17.72■□□□□ 0.43
TMEM30A-201ENST00000230461 DYMQ7RTS9 669 aa17.72■□□□□ 0.43
TMEM30A-201ENST00000230461 CSGALNACT2Q8N6G5 542 aa17.72■□□□□ 0.43
TMEM30A-201ENST00000230461 ALS2CR12Q96Q35 445 aa17.72■□□□□ 0.43
TMEM30A-201ENST00000230461 IVNS1ABPQ9Y6Y0 642 aa17.72■□□□□ 0.43
TMEM30A-201ENST00000230461 FLOT1O75955 427 aa17.72■□□□□ 0.43
TMEM30A-201ENST00000230461 PAFAH1B1P43034 410 aa17.72■□□□□ 0.43
TMEM30A-201ENST00000230461 NDUFA8P51970 172 aa17.72■□□□□ 0.43
TMEM30A-201ENST00000230461 CHRNA5P30532 468 aa17.72■□□□□ 0.43
TMEM30A-201ENST00000230461 FANCCQ00597 558 aa17.72■□□□□ 0.43
TMEM30A-201ENST00000230461 LINC00301Q8NCQ3 95 aa17.72■□□□□ 0.43
TMEM30A-201ENST00000230461 PIGSQ96S52 555 aa17.72■□□□□ 0.43
TMEM30A-201ENST00000230461 TMX1Q9H3N1 280 aa17.72■□□□□ 0.43
TMEM30A-201ENST00000230461 LUC7L2Q9Y383 392 aaKnown RBP17.72■□□□□ 0.43
TMEM30A-201ENST00000230461 SYNRGQ9UMZ2 1314 aa17.72■□□□□ 0.43
TMEM30A-201ENST00000230461 DDX39AO00148 427 aaKnown RBP17.71■□□□□ 0.43
TMEM30A-201ENST00000230461 PPP6R2O75170 966 aa17.71■□□□□ 0.43
TMEM30A-201ENST00000230461 ECM2O94769 699 aaPredicted RBP17.71■□□□□ 0.43
TMEM30A-201ENST00000230461 BMP3P12645 472 aa17.71■□□□□ 0.43
TMEM30A-201ENST00000230461 TECP42680 631 aa17.71■□□□□ 0.43
TMEM30A-201ENST00000230461 PRR16Q569H4 304 aa17.71■□□□□ 0.43
TMEM30A-201ENST00000230461 TDRD3Q9H7E2 651 aaKnown RBP17.71■□□□□ 0.43
TMEM30A-201ENST00000230461 TNNT3P45378 269 aaPredicted RBP17.71■□□□□ 0.43
TMEM30A-201ENST00000230461 NOP2P46087 812 aaKnown RBP17.71■□□□□ 0.43
TMEM30A-201ENST00000230461 DNA2P51530 1060 aa17.71■□□□□ 0.43
TMEM30A-201ENST00000230461 KRBA2Q6ZNG9 492 aa17.71■□□□□ 0.43
TMEM30A-201ENST00000230461 STOX1Q6ZVD7 989 aa17.71■□□□□ 0.43
TMEM30A-201ENST00000230461 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.71■□□□□ 0.43
TMEM30A-201ENST00000230461 SLC44A5Q8NCS7 719 aa17.71■□□□□ 0.43
TMEM30A-201ENST00000230461 RASGRP4Q8TDF6 673 aa17.71■□□□□ 0.43
TMEM30A-201ENST00000230461 TBC1D5Q92609 795 aa17.71■□□□□ 0.43
TMEM30A-201ENST00000230461 ALDH8A1Q9H2A2 487 aaPredicted RBP17.71■□□□□ 0.43
TMEM30A-201ENST00000230461 BLZF1Q9H2G9 400 aa17.71■□□□□ 0.43
TMEM30A-201ENST00000230461 SLC16A2P36021 539 aa17.71■□□□□ 0.43
TMEM30A-201ENST00000230461 SLC10A5Q5PT55 438 aa17.71■□□□□ 0.43
TMEM30A-201ENST00000230461 GAS7O60861 476 aa17.71■□□□□ 0.42
TMEM30A-201ENST00000230461 TBC1D8BQ0IIM8 1120 aa17.71■□□□□ 0.42
TMEM30A-201ENST00000230461 FBXO33Q7Z6M2 555 aa17.71■□□□□ 0.42
TMEM30A-201ENST00000230461 ENAHQ8N8S7 591 aaPredicted RBP17.71■□□□□ 0.42
TMEM30A-201ENST00000230461 NEK11Q8NG66 645 aa17.71■□□□□ 0.42
TMEM30A-201ENST00000230461 FTOQ9C0B1 505 aaKnown RBP eCLIP17.71■□□□□ 0.421e-9■□□□□ 8.7
TMEM30A-201ENST00000230461 SUGT1Q9Y2Z0 365 aa17.71■□□□□ 0.42
TMEM30A-201ENST00000230461 EHBP1Q8NDI1 1231 aa17.7■□□□□ 0.42
TMEM30A-201ENST00000230461 VPS16Q9H269 839 aa17.7■□□□□ 0.42
TMEM30A-201ENST00000230461 CEP135Q66GS9 1140 aa17.7■□□□□ 0.42
TMEM30A-201ENST00000230461 TMTC3Q6ZXV5 915 aa17.7■□□□□ 0.42
TMEM30A-201ENST00000230461 PRM3Q9NNZ6 103 aa17.7■□□□□ 0.42
TMEM30A-201ENST00000230461 hCG_1984214I3L0E3 225 aa17.7■□□□□ 0.42
TMEM30A-201ENST00000230461 PLEKHA8P1O95397 391 aa17.7■□□□□ 0.42
TMEM30A-201ENST00000230461 SUPT20HL1Q3ZLR7 823 aa17.7■□□□□ 0.42
TMEM30A-201ENST00000230461 ZNF713Q8N859 430 aaPredicted RBP17.7■□□□□ 0.42
TMEM30A-201ENST00000230461 LY9Q9HBG7 655 aa17.7■□□□□ 0.42
TMEM30A-201ENST00000230461 PHACTR2O75167 634 aa17.69■□□□□ 0.42
TMEM30A-201ENST00000230461 LONP1P36776 959 aaKnown RBP17.69■□□□□ 0.42
TMEM30A-201ENST00000230461 RCAN1P53805 252 aa17.69■□□□□ 0.42
TMEM30A-201ENST00000230461 TMEM179Q6ZVK1 233 aa17.69■□□□□ 0.42
TMEM30A-201ENST00000230461 CNGA4Q8IV77 575 aa17.69■□□□□ 0.42
TMEM30A-201ENST00000230461 FNBP4Q8N3X1 1017 aaPredicted RBP17.69■□□□□ 0.42
TMEM30A-201ENST00000230461 NOC4LQ9BVI4 516 aaKnown RBP17.69■□□□□ 0.42
TMEM30A-201ENST00000230461 CETN3O15182 167 aa17.69■□□□□ 0.42
TMEM30A-201ENST00000230461 ZNF75DP51815 510 aa17.69■□□□□ 0.42
TMEM30A-201ENST00000230461 CASP7P55210 303 aa17.69■□□□□ 0.42
TMEM30A-201ENST00000230461 MCF2L2Q86YR7 1114 aa17.69■□□□□ 0.42
TMEM30A-201ENST00000230461 CCDC42Q96M95 316 aa17.69■□□□□ 0.42
TMEM30A-201ENST00000230461 TMEM47Q9BQJ4 181 aa17.69■□□□□ 0.42
TMEM30A-201ENST00000230461 DDX25Q9UHL0 483 aaKnown RBP17.69■□□□□ 0.42
TMEM30A-201ENST00000230461 CCPG1Q9ULG6 757 aa17.69■□□□□ 0.42
TMEM30A-201ENST00000230461 CCDC175P0C221 793 aa17.69■□□□□ 0.42
TMEM30A-201ENST00000230461 MIGA2Q7L4E1 593 aa17.69■□□□□ 0.42
TMEM30A-201ENST00000230461 ZNF277Q9NRM2 450 aaPredicted RBP17.69■□□□□ 0.42
TMEM30A-201ENST00000230461 KDM3AQ9Y4C1 1321 aa17.68■□□□□ 0.42
TMEM30A-201ENST00000230461 GYS1P13807 737 aa17.68■□□□□ 0.42
TMEM30A-201ENST00000230461 SMTNP53814 917 aa17.68■□□□□ 0.42
TMEM30A-201ENST00000230461 SGMS1Q86VZ5 419 aa17.68■□□□□ 0.42
TMEM30A-201ENST00000230461 SMCR8Q8TEV9 937 aaPredicted RBP17.68■□□□□ 0.42
TMEM30A-201ENST00000230461 RAD51AP2Q09MP3 1159 aa17.68■□□□□ 0.42
TMEM30A-201ENST00000230461 NLRX1Q86UT6 975 aa17.68■□□□□ 0.42
TMEM30A-201ENST00000230461 SYMPKQ92797 1274 aaKnown RBP17.68■□□□□ 0.42
TMEM30A-201ENST00000230461 IL25Q9H293 177 aa17.68■□□□□ 0.42
TMEM30A-201ENST00000230461 EXOSC10Q01780 885 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms