RNA–Protein interactions for RNA: ENST00000221996.11

CRX-201, Transcript of cone-rod homeobox, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CRX, Length 4,470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-201ENST00000221996 TECP42680 631 aa10.98□□□□□ -0.65
CRX-201ENST00000221996 TRAPPC10P48553 1259 aa10.98□□□□□ -0.65
CRX-201ENST00000221996 PPP2R3AQ06190 1150 aa10.98□□□□□ -0.65
CRX-201ENST00000221996 GRAPQ13588 217 aa10.98□□□□□ -0.65
CRX-201ENST00000221996 GRAPLQ8TC17 118 aaPredicted RBP10.98□□□□□ -0.65
CRX-201ENST00000221996 ALS2CR12Q96Q35 445 aa10.98□□□□□ -0.65
CRX-201ENST00000221996 PPP2R2CQ9Y2T4 447 aa10.98□□□□□ -0.65
CRX-201ENST00000221996 PSDA5PKW4 1024 aaPredicted RBP10.98□□□□□ -0.65
CRX-201ENST00000221996 FOXN1O15353 648 aa10.98□□□□□ -0.65
CRX-201ENST00000221996 CASP1P29466 404 aa10.98□□□□□ -0.65
CRX-201ENST00000221996 KIF5AQ12840 1032 aa10.98□□□□□ -0.65
CRX-201ENST00000221996 MORC3Q14149 939 aa10.98□□□□□ -0.65
CRX-201ENST00000221996 MCM6Q14566 821 aa10.98□□□□□ -0.65
CRX-201ENST00000221996 CNNM4Q6P4Q7 775 aa10.98□□□□□ -0.65
CRX-201ENST00000221996 INTS5Q6P9B9 1019 aaKnown RBP10.98□□□□□ -0.65
CRX-201ENST00000221996 CEP112Q8N8E3 955 aa10.98□□□□□ -0.65
CRX-201ENST00000221996 AGXT2Q9BYV1 514 aa10.98□□□□□ -0.65
CRX-201ENST00000221996 ZHX1Q9UKY1 873 aaPredicted RBP10.98□□□□□ -0.65
CRX-201ENST00000221996 RPN1P04843 607 aaKnown RBP10.98□□□□□ -0.65
CRX-201ENST00000221996 SLC1A4P43007 532 aa10.98□□□□□ -0.65
CRX-201ENST00000221996 ARID5AQ03989 594 aa10.98□□□□□ -0.65
CRX-201ENST00000221996 ERCC6LQ2NKX8 1250 aa10.98□□□□□ -0.65
CRX-201ENST00000221996 CCDC122Q5T0U0 273 aa10.98□□□□□ -0.65
CRX-201ENST00000221996 ARHGEF1Q92888 912 aaKnown RBP10.98□□□□□ -0.65
CRX-201ENST00000221996 MTA3Q9BTC8 594 aa10.98□□□□□ -0.65
CRX-201ENST00000221996 LONP1P36776 959 aaKnown RBP10.97□□□□□ -0.65
CRX-201ENST00000221996 TRIM14Q14142 442 aa10.97□□□□□ -0.65
CRX-201ENST00000221996 TNIP1Q15025 636 aa10.97□□□□□ -0.65
CRX-201ENST00000221996 CYP26C1Q6V0L0 522 aa10.97□□□□□ -0.65
CRX-201ENST00000221996 TMTC1Q8IUR5 882 aa10.97□□□□□ -0.65
CRX-201ENST00000221996 ENOX1Q8TC92 643 aaKnown RBP10.97□□□□□ -0.65
CRX-201ENST00000221996 SH3RF3Q8TEJ3 882 aaPredicted RBP10.97□□□□□ -0.65
CRX-201ENST00000221996 SPAG5Q96R06 1193 aa10.97□□□□□ -0.65
CRX-201ENST00000221996 SLF1Q9BQI6 1058 aa10.97□□□□□ -0.65
CRX-201ENST00000221996 SPTLC3Q9NUV7 552 aa10.97□□□□□ -0.65
CRX-201ENST00000221996 PCDHA4Q9UN74 947 aa10.97□□□□□ -0.65
CRX-201ENST00000221996 KCNJ18B7U540 433 aa10.97□□□□□ -0.65
CRX-201ENST00000221996 UBE2Q2LH0YL09 131 aa10.97□□□□□ -0.65
CRX-201ENST00000221996 TRAF5O00463 557 aa10.97□□□□□ -0.65
CRX-201ENST00000221996 OR52Z1P0C646 297 aa10.97□□□□□ -0.65
CRX-201ENST00000221996 KCNJ12Q14500 433 aa10.97□□□□□ -0.65
CRX-201ENST00000221996 MAP9Q49MG5 647 aa10.97□□□□□ -0.65
CRX-201ENST00000221996 GPIHBP1Q8IV16 184 aa10.97□□□□□ -0.65
CRX-201ENST00000221996 OGFOD1Q8N543 542 aa10.97□□□□□ -0.65
CRX-201ENST00000221996 ENGASEQ8NFI3 743 aa10.97□□□□□ -0.65
CRX-201ENST00000221996 GTPBP4Q9BZE4 634 aaKnown RBP10.97□□□□□ -0.65
CRX-201ENST00000221996 RHOXF2BP0C7M4 288 aa10.97□□□□□ -0.65
CRX-201ENST00000221996 NEK8Q86SG6 692 aa10.97□□□□□ -0.65
CRX-201ENST00000221996 SLC44A5Q8NCS7 719 aa10.97□□□□□ -0.65
CRX-201ENST00000221996 CAPZA3Q96KX2 299 aa10.97□□□□□ -0.65
CRX-201ENST00000221996 RHOXF2Q9BQY4 288 aa10.97□□□□□ -0.65
CRX-201ENST00000221996 ZMYND15Q9H091 742 aa10.97□□□□□ -0.65
CRX-201ENST00000221996 OGFRQ9NZT2 677 aa10.97□□□□□ -0.65
CRX-201ENST00000221996 LTN1O94822 1766 aa10.97□□□□□ -0.65
CRX-201ENST00000221996 SF3B3Q15393 1217 aaKnown RBP10.96□□□□□ -0.65
CRX-201ENST00000221996 USP17L2Q6R6M4 530 aa10.96□□□□□ -0.65
CRX-201ENST00000221996 VPS36Q86VN1 386 aa10.96□□□□□ -0.65
CRX-201ENST00000221996 UBE2Q2Q8WVN8 375 aa10.96□□□□□ -0.65
CRX-201ENST00000221996 PAGE5Q96GU1 130 aa10.96□□□□□ -0.65
CRX-201ENST00000221996 VEZTQ9HBM0 779 aa10.96□□□□□ -0.65
CRX-201ENST00000221996 SETD1AO15047 1707 aaKnown RBP10.96□□□□□ -0.65
CRX-201ENST00000221996 ZFYVE27Q5T4F4 411 aa10.96□□□□□ -0.65
CRX-201ENST00000221996 VSTM4Q8IW00 320 aa10.96□□□□□ -0.65
CRX-201ENST00000221996 CACNA1FO60840 1977 aa10.96□□□□□ -0.65
CRX-201ENST00000221996 AP5Z1O43299 807 aa10.96□□□□□ -0.66
CRX-201ENST00000221996 PPP1R2P41236 205 aa10.96□□□□□ -0.66
CRX-201ENST00000221996 GALNT17Q6IS24 598 aa10.96□□□□□ -0.66
CRX-201ENST00000221996 DGKHQ86XP1 1220 aa10.96□□□□□ -0.66
CRX-201ENST00000221996 LINC00116Q8NCU8 138 aa10.96□□□□□ -0.66
CRX-201ENST00000221996 NEK11Q8NG66 645 aa10.96□□□□□ -0.66
CRX-201ENST00000221996 TEKT1Q969V4 418 aa10.96□□□□□ -0.66
CRX-201ENST00000221996 NSUN4Q96CB9 384 aaKnown RBP10.96□□□□□ -0.66
CRX-201ENST00000221996 SLC4A9Q96Q91 983 aa10.96□□□□□ -0.66
CRX-201ENST00000221996 EHMT1Q9H9B1 1298 aa10.96□□□□□ -0.66
CRX-201ENST00000221996 CWC15Q9P013 229 aaKnown RBP10.96□□□□□ -0.66
CRX-201ENST00000221996 FAM205CA6NFA0 338 aa10.96□□□□□ -0.66
CRX-201ENST00000221996 PRR29P0C7W0 189 aa10.96□□□□□ -0.66
CRX-201ENST00000221996 NOP2P46087 812 aaKnown RBP10.96□□□□□ -0.66
CRX-201ENST00000221996 RCAN1P53805 252 aa10.96□□□□□ -0.66
CRX-201ENST00000221996 RAD51AP2Q09MP3 1159 aa10.96□□□□□ -0.66
CRX-201ENST00000221996 FCHSD1Q86WN1 690 aa10.96□□□□□ -0.66
CRX-201ENST00000221996 CPVLQ9H3G5 476 aa10.96□□□□□ -0.66
CRX-201ENST00000221996 SAMM50Q9Y512 469 aa10.96□□□□□ -0.66
CRX-201ENST00000221996 XRN1Q8IZH2 1706 aaKnown RBP10.95□□□□□ -0.66
CRX-201ENST00000221996 TMEM232C9JQI7 657 aa10.95□□□□□ -0.66
CRX-201ENST00000221996 STX10O60499 249 aa10.95□□□□□ -0.66
CRX-201ENST00000221996 TACC1O75410 805 aa10.95□□□□□ -0.66
CRX-201ENST00000221996 FGFR2P21802 821 aa10.95□□□□□ -0.66
CRX-201ENST00000221996 KIAA0825Q8IV33 1275 aa10.95□□□□□ -0.66
CRX-201ENST00000221996 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.95□□□□□ -0.66
CRX-201ENST00000221996 TOPAZ1Q8N9V7 1692 aa10.95□□□□□ -0.66
CRX-201ENST00000221996 MACROD2A1Z1Q3 448 aa10.95□□□□□ -0.66
CRX-201ENST00000221996 MCM3P25205 808 aa10.95□□□□□ -0.66
CRX-201ENST00000221996 MSL1Q68DK7 614 aa10.95□□□□□ -0.66
CRX-201ENST00000221996 METTL16Q86W50 562 aaKnown RBP10.95□□□□□ -0.66
CRX-201ENST00000221996 CCDC65Q8IXS2 484 aa10.95□□□□□ -0.66
CRX-201ENST00000221996 BPIFA3Q9BQP9 254 aa10.95□□□□□ -0.66
CRX-201ENST00000221996 CENPHQ9H3R5 247 aa10.95□□□□□ -0.66
CRX-201ENST00000221996 SLIT3O75094 1523 aa10.95□□□□□ -0.66
CRX-201ENST00000221996 USP27XA6NNY8 438 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms