RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 LRRC41Q15345 812 aa18.98■□□□□ 0.63
NME3-201ENST00000219302 CTR9Q6PD62 1173 aa18.98■□□□□ 0.63
NME3-201ENST00000219302 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.98■□□□□ 0.635e-32■■■■□ 24.1
NME3-201ENST00000219302 KANSL2Q9H9L4 492 aa18.98■□□□□ 0.63
NME3-201ENST00000219302 FBXO28Q9NVF7 368 aa18.98■□□□□ 0.63
NME3-201ENST00000219302 ATP11BQ9Y2G3 1177 aa18.98■□□□□ 0.63
NME3-201ENST00000219302 SMCHD1A6NHR9 2005 aa18.98■□□□□ 0.63
NME3-201ENST00000219302 BAZ2AQ9UIF9 1905 aaKnown RBP18.98■□□□□ 0.63
NME3-201ENST00000219302 KBTBD13C9JR72 458 aa18.97■□□□□ 0.63
NME3-201ENST00000219302 ADCYAP1R1P41586 468 aa18.97■□□□□ 0.63
NME3-201ENST00000219302 C1orf53Q5VUE5 145 aa18.97■□□□□ 0.63
NME3-201ENST00000219302 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.97■□□□□ 0.63
NME3-201ENST00000219302 PUS7LQ9H0K6 701 aaKnown RBP18.97■□□□□ 0.63
NME3-201ENST00000219302 PRKAG2Q9UGJ0 569 aa18.97■□□□□ 0.63
NME3-201ENST00000219302 ZNFX1Q9P2E3 1918 aaKnown RBP18.97■□□□□ 0.63
NME3-201ENST00000219302 VWA5AO00534 786 aa18.96■□□□□ 0.63
NME3-201ENST00000219302 TRIM60Q495X7 471 aa18.96■□□□□ 0.63
NME3-201ENST00000219302 FAM47AQ5JRC9 791 aa18.96■□□□□ 0.63
NME3-201ENST00000219302 RIOX2Q8IUF8 465 aa18.96■□□□□ 0.63
NME3-201ENST00000219302 REPS2Q8NFH8 660 aa18.96■□□□□ 0.63
NME3-201ENST00000219302 GUCD1Q96NT3 240 aa18.96■□□□□ 0.63
NME3-201ENST00000219302 NRBP1Q9UHY1 535 aa18.96■□□□□ 0.63
NME3-201ENST00000219302 DIS3Q9Y2L1 958 aaKnown RBP18.96■□□□□ 0.63
NME3-201ENST00000219302 SLC4A4Q9Y6R1 1079 aa18.96■□□□□ 0.63
NME3-201ENST00000219302 PARP14Q460N5 1801 aa18.95■□□□□ 0.62
NME3-201ENST00000219302 STAT3P40763 770 aa18.95■□□□□ 0.62
NME3-201ENST00000219302 SHHQ15465 462 aa18.95■□□□□ 0.62
NME3-201ENST00000219302 ZNF792Q3KQV3 632 aa18.95■□□□□ 0.62
NME3-201ENST00000219302 SAMD1Q6SPF0 538 aaPredicted RBP18.95■□□□□ 0.62
NME3-201ENST00000219302 ZNF214Q9UL59 606 aaPredicted RBP18.95■□□□□ 0.62
NME3-201ENST00000219302 PPP1R9AQ9ULJ8 1098 aa18.95■□□□□ 0.62
NME3-201ENST00000219302 MYH8P13535 1937 aa18.94■□□□□ 0.62
NME3-201ENST00000219302 TRIM43BA6NCK2 446 aa18.94■□□□□ 0.62
NME3-201ENST00000219302 PGK2P07205 417 aa18.94■□□□□ 0.62
NME3-201ENST00000219302 C9orf50Q5SZB4 431 aa18.94■□□□□ 0.62
NME3-201ENST00000219302 SH3RF1Q7Z6J0 888 aa18.94■□□□□ 0.62
NME3-201ENST00000219302 AMOTL1Q8IY63 956 aa18.94■□□□□ 0.62
NME3-201ENST00000219302 BADQ92934 168 aa18.94■□□□□ 0.62
NME3-201ENST00000219302 FERMT2Q96AC1 680 aa18.94■□□□□ 0.62
NME3-201ENST00000219302 TRIM43Q96BQ3 446 aaPredicted RBP18.94■□□□□ 0.62
NME3-201ENST00000219302 STRBPQ96SI9 672 aaKnown RBP18.94■□□□□ 0.62
NME3-201ENST00000219302 MMP19Q99542 508 aa18.94■□□□□ 0.62
NME3-201ENST00000219302 TINF2Q9BSI4 451 aa18.94■□□□□ 0.62
NME3-201ENST00000219302 PDLIM7Q9NR12 457 aa18.94■□□□□ 0.62
NME3-201ENST00000219302 PHF24Q9UPV7 400 aa18.94■□□□□ 0.62
NME3-201ENST00000219302 LTBP2Q14767 1821 aa18.93■□□□□ 0.62
NME3-201ENST00000219302 UNC80Q8N2C7 3258 aa18.93■□□□□ 0.62
NME3-201ENST00000219302 MYCNP04198 464 aaPredicted RBP18.93■□□□□ 0.62
NME3-201ENST00000219302 TAL1P17542 331 aaPredicted RBP18.93■□□□□ 0.62
NME3-201ENST00000219302 SBK1Q52WX2 424 aa18.93■□□□□ 0.62
NME3-201ENST00000219302 FAM83BQ5T0W9 1011 aa18.93■□□□□ 0.62
NME3-201ENST00000219302 ZSCAN25Q6NSZ9 544 aa18.93■□□□□ 0.62
NME3-201ENST00000219302 DDRGK1Q96HY6 314 aa18.93■□□□□ 0.62
NME3-201ENST00000219302 CHMP4BQ9H444 224 aaKnown RBP18.93■□□□□ 0.62
NME3-201ENST00000219302 GOPCQ9HD26 462 aa18.93■□□□□ 0.62
NME3-201ENST00000219302 SMARCA5O60264 1052 aaPredicted RBP18.92■□□□□ 0.62
NME3-201ENST00000219302 ZNF865P0CJ78 1059 aaPredicted RBP18.92■□□□□ 0.62
NME3-201ENST00000219302 TLE2Q04725 743 aa18.92■□□□□ 0.62
NME3-201ENST00000219302 KCTD2Q14681 263 aa18.92■□□□□ 0.62
NME3-201ENST00000219302 DIEXFQ68CQ4 756 aaKnown RBP18.92■□□□□ 0.62
NME3-201ENST00000219302 LRRCC1Q9C099 1032 aa18.92■□□□□ 0.62
NME3-201ENST00000219302 XPNPEP3Q9NQH7 507 aa18.92■□□□□ 0.62
NME3-201ENST00000219302 COL11A1P12107 1806 aaPredicted RBP18.91■□□□□ 0.62
NME3-201ENST00000219302 GSG1L2A8MUP6 293 aa18.91■□□□□ 0.62
NME3-201ENST00000219302 RARBP10826 455 aa18.91■□□□□ 0.62
NME3-201ENST00000219302 RASA1P20936 1047 aa18.91■□□□□ 0.62
NME3-201ENST00000219302 FAM161BQ96MY7 647 aa18.91■□□□□ 0.62
NME3-201ENST00000219302 PRDM5Q9NQX1 630 aaPredicted RBP18.91■□□□□ 0.62
NME3-201ENST00000219302 ARPP21Q9UBL0 812 aaPredicted RBP18.91■□□□□ 0.62
NME3-201ENST00000219302 PGK1P00558 417 aa18.9■□□□□ 0.62
NME3-201ENST00000219302 ITGB8P26012 769 aa18.9■□□□□ 0.62
NME3-201ENST00000219302 COPB2P35606 906 aa18.9■□□□□ 0.62
NME3-201ENST00000219302 GIMAP6Q6P9H5 292 aa18.9■□□□□ 0.62
NME3-201ENST00000219302 NUP88Q99567 741 aaPredicted RBP18.9■□□□□ 0.62
NME3-201ENST00000219302 ECHDC1Q9NTX5 307 aa18.9■□□□□ 0.62
NME3-201ENST00000219302 NYAP2Q9P242 653 aa18.9■□□□□ 0.62
NME3-201ENST00000219302 TACC3Q9Y6A5 838 aa18.9■□□□□ 0.62
NME3-201ENST00000219302 F5H6K3 240 aa18.89■□□□□ 0.61
NME3-201ENST00000219302 KLRC3Q07444 240 aa18.89■□□□□ 0.61
NME3-201ENST00000219302 C20orf194Q5TEA3 1177 aa18.89■□□□□ 0.61
NME3-201ENST00000219302 ZNF697Q5TEC3 545 aa18.89■□□□□ 0.61
NME3-201ENST00000219302 RNF180Q86T96 592 aa18.89■□□□□ 0.61
NME3-201ENST00000219302 OSBP2Q969R2 916 aa18.89■□□□□ 0.61
NME3-201ENST00000219302 SEMA6BQ9H3T3 888 aa18.89■□□□□ 0.61
NME3-201ENST00000219302 RIPK3Q9Y572 518 aa18.89■□□□□ 0.61
NME3-201ENST00000219302 ROBO3Q96MS0 1386 aa18.89■□□□□ 0.61
NME3-201ENST00000219302 MYH7P12883 1935 aa18.88■□□□□ 0.61
NME3-201ENST00000219302 GREB1LQ9C091 1923 aaPredicted RBP18.88■□□□□ 0.61
NME3-201ENST00000219302 DNAJC25-GNG10A0A024R161 153 aa18.88■□□□□ 0.61
NME3-201ENST00000219302 IGKV6D-41A0A0C4DH26 115 aa18.88■□□□□ 0.61
NME3-201ENST00000219302 RAD21O60216 631 aa18.88■□□□□ 0.61
NME3-201ENST00000219302 ADAMTS4O75173 837 aa18.88■□□□□ 0.61
NME3-201ENST00000219302 SNAI1O95863 264 aaPredicted RBP18.88■□□□□ 0.61
NME3-201ENST00000219302 AKR1A1P14550 325 aa18.88■□□□□ 0.61
NME3-201ENST00000219302 MSL3Q8N5Y2 521 aaKnown RBP18.88■□□□□ 0.61
NME3-201ENST00000219302 SLF1Q9BQI6 1058 aa18.88■□□□□ 0.61
NME3-201ENST00000219302 TEX13BQ9BXU2 312 aa18.88■□□□□ 0.61
NME3-201ENST00000219302 RCAN3Q9UKA8 241 aa18.88■□□□□ 0.61
NME3-201ENST00000219302 A0A1W2PQ45 241 aaPredicted RBP18.87■□□□□ 0.61
NME3-201ENST00000219302 A0A1W2PQY0 241 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms