RNA–Protein interactions for RNA: ENST00000216155.11

SYNGR1-201, Transcript of synaptogyrin 1, humanhuman

TSL 3 BASIC

Gene SYNGR1, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-201ENST00000216155 SEPT4O43236 478 aa23.66■■□□□ 1.38
SYNGR1-201ENST00000216155 MAML3Q96JK9 1138 aa23.66■■□□□ 1.38
SYNGR1-201ENST00000216155 FBXO28Q9NVF7 368 aa23.66■■□□□ 1.38
SYNGR1-201ENST00000216155 SLC5A4Q9NY91 659 aa23.66■■□□□ 1.38
SYNGR1-201ENST00000216155 ADAMTS5Q9UNA0 930 aa23.66■■□□□ 1.38
SYNGR1-201ENST00000216155 RTP1P59025 263 aa23.65■■□□□ 1.38
SYNGR1-201ENST00000216155 ZSCAN25Q6NSZ9 544 aa23.65■■□□□ 1.38
SYNGR1-201ENST00000216155 SLC17A8Q8NDX2 589 aa23.65■■□□□ 1.38
SYNGR1-201ENST00000216155 KANSL2Q9H9L4 492 aa23.65■■□□□ 1.38
SYNGR1-201ENST00000216155 ARPP21Q9UBL0 812 aaPredicted RBP23.65■■□□□ 1.38
SYNGR1-201ENST00000216155 ZNFX1Q9P2E3 1918 aaKnown RBP23.65■■□□□ 1.38
SYNGR1-201ENST00000216155 FCER1AP12319 257 aa23.64■■□□□ 1.37
SYNGR1-201ENST00000216155 PRAMEF19Q5SWL8 479 aa23.64■■□□□ 1.37
SYNGR1-201ENST00000216155 ARRDC4Q8NCT1 418 aa23.64■■□□□ 1.37
SYNGR1-201ENST00000216155 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.64■■□□□ 1.37
SYNGR1-201ENST00000216155 KBTBD13C9JR72 458 aa23.63■■□□□ 1.37
SYNGR1-201ENST00000216155 SLC25A27O95847 323 aa23.63■■□□□ 1.37
SYNGR1-201ENST00000216155 GOPCQ9HD26 462 aa23.63■■□□□ 1.37
SYNGR1-201ENST00000216155 PLXNA1Q9UIW2 1896 aa23.63■■□□□ 1.37
SYNGR1-201ENST00000216155 PPP1R9AQ9ULJ8 1098 aa23.63■■□□□ 1.37
SYNGR1-201ENST00000216155 FAM47AQ5JRC9 791 aa23.62■■□□□ 1.37
SYNGR1-201ENST00000216155 FAM83BQ5T0W9 1011 aa23.62■■□□□ 1.37
SYNGR1-201ENST00000216155 RIOX2Q8IUF8 465 aa23.62■■□□□ 1.37
SYNGR1-201ENST00000216155 STRBPQ96SI9 672 aaKnown RBP23.62■■□□□ 1.37
SYNGR1-201ENST00000216155 MMP19Q99542 508 aa23.62■■□□□ 1.37
SYNGR1-201ENST00000216155 LBHD1Q9BQE6 289 aaPredicted RBP23.62■■□□□ 1.37
SYNGR1-201ENST00000216155 ECHDC1Q9NTX5 307 aa23.62■■□□□ 1.37
SYNGR1-201ENST00000216155 MTMR10Q9NXD2 777 aa23.62■■□□□ 1.37
SYNGR1-201ENST00000216155 ZNF214Q9UL59 606 aaPredicted RBP23.62■■□□□ 1.37
SYNGR1-201ENST00000216155 ATP11BQ9Y2G3 1177 aa23.62■■□□□ 1.37
SYNGR1-201ENST00000216155 ROBO3Q96MS0 1386 aa23.62■■□□□ 1.37
SYNGR1-201ENST00000216155 VWA5AO00534 786 aa23.61■■□□□ 1.37
SYNGR1-201ENST00000216155 SNX17Q15036 470 aa23.61■■□□□ 1.37
SYNGR1-201ENST00000216155 SLC39A5Q6ZMH5 540 aa23.61■■□□□ 1.37
SYNGR1-201ENST00000216155 REPS2Q8NFH8 660 aa23.61■■□□□ 1.37
SYNGR1-201ENST00000216155 RAD21O60216 631 aa23.6■■□□□ 1.37
SYNGR1-201ENST00000216155 MYCNP04198 464 aaPredicted RBP23.6■■□□□ 1.37
SYNGR1-201ENST00000216155 PGK2P07205 417 aa23.6■■□□□ 1.37
SYNGR1-201ENST00000216155 LRRC41Q15345 812 aa23.6■■□□□ 1.37
SYNGR1-201ENST00000216155 SBK1Q52WX2 424 aa23.6■■□□□ 1.37
SYNGR1-201ENST00000216155 KBTBD3Q8NAB2 608 aa23.6■■□□□ 1.37
SYNGR1-201ENST00000216155 PRKAG2Q9UGJ0 569 aa23.6■■□□□ 1.37
SYNGR1-201ENST00000216155 STXBP5LQ9Y2K9 1186 aa23.6■■□□□ 1.37
SYNGR1-201ENST00000216155 A0A0C4DFX4 3053 aa23.6■■□□□ 1.37
SYNGR1-201ENST00000216155 GSG1L2A8MUP6 293 aa23.59■■□□□ 1.37
SYNGR1-201ENST00000216155 RASA1P20936 1047 aa23.59■■□□□ 1.37
SYNGR1-201ENST00000216155 STAT3P40763 770 aa23.59■■□□□ 1.37
SYNGR1-201ENST00000216155 TRIM60Q495X7 471 aa23.59■■□□□ 1.37
SYNGR1-201ENST00000216155 TSHZ3Q63HK5 1081 aa23.59■■□□□ 1.37
SYNGR1-201ENST00000216155 OSBP2Q969R2 916 aa23.59■■□□□ 1.37
SYNGR1-201ENST00000216155 KCTD2Q14681 263 aa23.58■■□□□ 1.37
SYNGR1-201ENST00000216155 ZNF792Q3KQV3 632 aa23.58■■□□□ 1.37
SYNGR1-201ENST00000216155 STK11IPQ8N1F8 1099 aa23.58■■□□□ 1.37
SYNGR1-201ENST00000216155 APPBP2Q92624 585 aa23.58■■□□□ 1.37
SYNGR1-201ENST00000216155 NUP88Q99567 741 aaPredicted RBP23.58■■□□□ 1.37
SYNGR1-201ENST00000216155 EPB41L4AQ9HCS5 686 aaPredicted RBP23.58■■□□□ 1.37
SYNGR1-201ENST00000216155 NRBP1Q9UHY1 535 aa23.58■■□□□ 1.37
SYNGR1-201ENST00000216155 SMCHD1A6NHR9 2005 aa23.58■■□□□ 1.37
SYNGR1-201ENST00000216155 UNC80Q8N2C7 3258 aa23.57■■□□□ 1.36
SYNGR1-201ENST00000216155 ADCYAP1R1P41586 468 aa23.57■■□□□ 1.36
SYNGR1-201ENST00000216155 GIMAP6Q6P9H5 292 aa23.57■■□□□ 1.36
SYNGR1-201ENST00000216155 FERMT2Q96AC1 680 aa23.57■■□□□ 1.36
SYNGR1-201ENST00000216155 TINF2Q9BSI4 451 aa23.57■■□□□ 1.36
SYNGR1-201ENST00000216155 PRDM5Q9NQX1 630 aaPredicted RBP23.57■■□□□ 1.36
SYNGR1-201ENST00000216155 DIS3Q9Y2L1 958 aaKnown RBP23.57■■□□□ 1.36
SYNGR1-201ENST00000216155 RARBP10826 455 aa23.56■■□□□ 1.36
SYNGR1-201ENST00000216155 COPB2P35606 906 aa23.56■■□□□ 1.36
SYNGR1-201ENST00000216155 SLF1Q9BQI6 1058 aa23.56■■□□□ 1.36
SYNGR1-201ENST00000216155 XPNPEP3Q9NQH7 507 aa23.56■■□□□ 1.36
SYNGR1-201ENST00000216155 PDLIM7Q9NR12 457 aa23.56■■□□□ 1.36
SYNGR1-201ENST00000216155 NYAP2Q9P242 653 aa23.56■■□□□ 1.36
SYNGR1-201ENST00000216155 MYH4Q9Y623 1939 aa23.56■■□□□ 1.36
SYNGR1-201ENST00000216155 CDH23Q9H251 3354 aa23.55■■□□□ 1.36
SYNGR1-201ENST00000216155 MINDY4BA8MYZ0 360 aa23.55■■□□□ 1.36
SYNGR1-201ENST00000216155 DLL1O00548 723 aa23.55■■□□□ 1.36
SYNGR1-201ENST00000216155 GPAA1O43292 621 aa23.55■■□□□ 1.36
SYNGR1-201ENST00000216155 NDUFB10O96000 172 aa23.55■■□□□ 1.36
SYNGR1-201ENST00000216155 TAL1P17542 331 aaPredicted RBP23.55■■□□□ 1.36
SYNGR1-201ENST00000216155 C1orf53Q5VUE5 145 aa23.55■■□□□ 1.36
SYNGR1-201ENST00000216155 GPATCH3Q96I76 525 aa23.55■■□□□ 1.36
SYNGR1-201ENST00000216155 DCTPP1Q9H773 170 aa23.55■■□□□ 1.36
SYNGR1-201ENST00000216155 MKNK2Q9HBH9 465 aa23.55■■□□□ 1.36
SYNGR1-201ENST00000216155 PHF24Q9UPV7 400 aa23.55■■□□□ 1.36
SYNGR1-201ENST00000216155 IGKV6D-41A0A0C4DH26 115 aa23.54■■□□□ 1.36
SYNGR1-201ENST00000216155 F5H6K3 240 aa23.54■■□□□ 1.36
SYNGR1-201ENST00000216155 POTEB2H3BUK9 544 aa23.54■■□□□ 1.36
SYNGR1-201ENST00000216155 M0R2C6 588 aa23.54■■□□□ 1.36
SYNGR1-201ENST00000216155 RNF113AO15541 343 aaKnown RBP23.54■■□□□ 1.36
SYNGR1-201ENST00000216155 ZNF865P0CJ78 1059 aaPredicted RBP23.54■■□□□ 1.36
SYNGR1-201ENST00000216155 KLRC3Q07444 240 aa23.54■■□□□ 1.36
SYNGR1-201ENST00000216155 LENG1Q96BZ8 264 aaPredicted RBP23.54■■□□□ 1.36
SYNGR1-201ENST00000216155 TEX13BQ9BXU2 312 aa23.54■■□□□ 1.36
SYNGR1-201ENST00000216155 PGK1P00558 417 aa23.53■■□□□ 1.36
SYNGR1-201ENST00000216155 FAM109BQ6ICB4 259 aaPredicted RBP23.53■■□□□ 1.36
SYNGR1-201ENST00000216155 SNRNP48Q6IEG0 339 aaKnown RBP23.53■■□□□ 1.36
SYNGR1-201ENST00000216155 SH3RF1Q7Z6J0 888 aa23.53■■□□□ 1.36
SYNGR1-201ENST00000216155 EYSQ5T1H1 3165 aa23.52■■□□□ 1.36
SYNGR1-201ENST00000216155 TRIM43BA6NCK2 446 aa23.52■■□□□ 1.36
SYNGR1-201ENST00000216155 ZFYP08048 801 aaPredicted RBP23.52■■□□□ 1.36
SYNGR1-201ENST00000216155 AKR1A1P14550 325 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms