RNA–Protein interactions for RNA: ENSMUST00000219577.1

Herc4-208, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Herc4, Length 3,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-208ENSMUST00000219577 Zbtb39Q6PDK0 712 aa13.59□□□□□ -0.23
Herc4-208ENSMUST00000219577 Lrrc15Q80X72 579 aa13.59□□□□□ -0.23
Herc4-208ENSMUST00000219577 Ssc5dQ8BV57 1371 aa13.59□□□□□ -0.23
Herc4-208ENSMUST00000219577 4931408C20RikE9PWP9 1381 aa13.58□□□□□ -0.23
Herc4-208ENSMUST00000219577 Pafah1b1P63005 410 aaKnown RBP13.58□□□□□ -0.23
Herc4-208ENSMUST00000219577 Znf667Q2TL60 609 aa13.58□□□□□ -0.23
Herc4-208ENSMUST00000219577 Prpf38aQ4FK66 312 aaKnown RBP13.58□□□□□ -0.23
Herc4-208ENSMUST00000219577 Atp1a1Q8VDN2 1023 aaKnown RBP13.58□□□□□ -0.23
Herc4-208ENSMUST00000219577 Q9D5Q8 446 aa13.58□□□□□ -0.23
Herc4-208ENSMUST00000219577 Tpcn1Q9EQJ0 817 aa13.58□□□□□ -0.23
Herc4-208ENSMUST00000219577 Zcchc17Q9ESX4 241 aaKnown RBP13.58□□□□□ -0.23
Herc4-208ENSMUST00000219577 Copb1Q9JIF7 953 aa13.58□□□□□ -0.23
Herc4-208ENSMUST00000219577 Myh2G3UW82 1942 aa13.58□□□□□ -0.24
Herc4-208ENSMUST00000219577 Krt78E9Q0F0 1068 aa13.58□□□□□ -0.24
Herc4-208ENSMUST00000219577 Pth1rP41593 591 aa13.58□□□□□ -0.24
Herc4-208ENSMUST00000219577 Il17raQ60943 864 aa13.58□□□□□ -0.24
Herc4-208ENSMUST00000219577 Anks1bQ8BIZ1 1259 aa13.58□□□□□ -0.24
Herc4-208ENSMUST00000219577 Spice1Q8C804 860 aa13.58□□□□□ -0.24
Herc4-208ENSMUST00000219577 Tmem60Q8K174 133 aa13.58□□□□□ -0.24
Herc4-208ENSMUST00000219577 Saal1Q9D2C2 474 aa13.58□□□□□ -0.24
Herc4-208ENSMUST00000219577 Bcl2l12Q9D3J3 255 aa13.58□□□□□ -0.24
Herc4-208ENSMUST00000219577 Kcna1P16388 495 aa13.58□□□□□ -0.24
Herc4-208ENSMUST00000219577 Alppl2P24823 529 aa13.58□□□□□ -0.24
Herc4-208ENSMUST00000219577 Ftl1P29391 183 aa13.58□□□□□ -0.24
Herc4-208ENSMUST00000219577 Skap2Q3UND0 358 aa13.58□□□□□ -0.24
Herc4-208ENSMUST00000219577 ParnQ8VDG3 624 aa13.58□□□□□ -0.24
Herc4-208ENSMUST00000219577 Ppef2O35385 757 aa13.58□□□□□ -0.24
Herc4-208ENSMUST00000219577 Dnajc17Q91WT4 303 aa13.58□□□□□ -0.24
Herc4-208ENSMUST00000219577 Sh3bp5lQ99LH9 392 aa13.58□□□□□ -0.24
Herc4-208ENSMUST00000219577 Fam217aQ9D9W6 419 aa13.58□□□□□ -0.24
Herc4-208ENSMUST00000219577 Ano3A2AHL1 981 aa13.57□□□□□ -0.24
Herc4-208ENSMUST00000219577 Ms4a1P19437 291 aa13.57□□□□□ -0.24
Herc4-208ENSMUST00000219577 Ptpn12P35831 775 aa13.57□□□□□ -0.24
Herc4-208ENSMUST00000219577 Eya3P97480 510 aa13.57□□□□□ -0.24
Herc4-208ENSMUST00000219577 Krt86P97861 486 aa13.57□□□□□ -0.24
Herc4-208ENSMUST00000219577 Asic3Q6X1Y6 530 aa13.57□□□□□ -0.24
Herc4-208ENSMUST00000219577 Yars2Q8BYL4 472 aaKnown RBP13.57□□□□□ -0.24
Herc4-208ENSMUST00000219577 Ccdc105Q9D4K7 499 aa13.57□□□□□ -0.24
Herc4-208ENSMUST00000219577 Gm7356A0A087WSA6 508 aa13.57□□□□□ -0.24
Herc4-208ENSMUST00000219577 Gm5934D3Z4U6 212 aa13.57□□□□□ -0.24
Herc4-208ENSMUST00000219577 A430078G23RikE9Q7Y4 484 aa13.57□□□□□ -0.24
Herc4-208ENSMUST00000219577 Meis3P97368 378 aa13.57□□□□□ -0.24
Herc4-208ENSMUST00000219577 Pls1Q3V0K9 630 aa13.57□□□□□ -0.24
Herc4-208ENSMUST00000219577 Gdap1l1Q8VE33 370 aa13.57□□□□□ -0.24
Herc4-208ENSMUST00000219577 Slc44a4Q91VA1 707 aa13.57□□□□□ -0.24
Herc4-208ENSMUST00000219577 Smc1aQ9CU62 1233 aaKnown RBP13.57□□□□□ -0.24
Herc4-208ENSMUST00000219577 Mtfr1lQ9CWE0 289 aa13.57□□□□□ -0.24
Herc4-208ENSMUST00000219577 Dydc2Q9D3X8 139 aa13.57□□□□□ -0.24
Herc4-208ENSMUST00000219577 SrcapA0A087WQ44 3271 aa13.57□□□□□ -0.24
Herc4-208ENSMUST00000219577 Dnajc14Q921R4 703 aa13.57□□□□□ -0.24
Herc4-208ENSMUST00000219577 Gtf2iQ9ESZ8 998 aaKnown RBP13.57□□□□□ -0.24
Herc4-208ENSMUST00000219577 Ybx3Q9JKB3 361 aaKnown RBP13.57□□□□□ -0.24
Herc4-208ENSMUST00000219577 Uso1Q9Z1Z0 959 aaKnown RBP13.57□□□□□ -0.24
Herc4-208ENSMUST00000219577 Exoc3l2D3YUP5 789 aa13.56□□□□□ -0.24
Herc4-208ENSMUST00000219577 Fam186bD3Z420 943 aa13.56□□□□□ -0.24
Herc4-208ENSMUST00000219577 ChkbO55229 394 aa13.56□□□□□ -0.24
Herc4-208ENSMUST00000219577 Traf1P39428 409 aa13.56□□□□□ -0.24
Herc4-208ENSMUST00000219577 Ankrd13dQ6PD24 605 aa13.56□□□□□ -0.24
Herc4-208ENSMUST00000219577 Kdm1aQ6ZQ88 853 aa13.56□□□□□ -0.24
Herc4-208ENSMUST00000219577 Kif2bQ8C0N1 668 aa13.56□□□□□ -0.24
Herc4-208ENSMUST00000219577 HibadhQ99L13 335 aaKnown RBP13.56□□□□□ -0.24
Herc4-208ENSMUST00000219577 AW822073A0A0N4SUK1 652 aa13.56□□□□□ -0.24
Herc4-208ENSMUST00000219577 Fkbp1aP26883 108 aaKnown RBP13.56□□□□□ -0.24
Herc4-208ENSMUST00000219577 Il15P48346 162 aa13.56□□□□□ -0.24
Herc4-208ENSMUST00000219577 Cacnb3P54285 484 aa13.56□□□□□ -0.24
Herc4-208ENSMUST00000219577 Rhbdl3P58873 404 aa13.56□□□□□ -0.24
Herc4-208ENSMUST00000219577 Sycp1Q62209 993 aa13.56□□□□□ -0.24
Herc4-208ENSMUST00000219577 Exoc8Q6PGF7 716 aa13.56□□□□□ -0.24
Herc4-208ENSMUST00000219577 Znf18Q810A1 556 aa13.56□□□□□ -0.24
Herc4-208ENSMUST00000219577 Ccdc73Q8CDM4 1066 aa13.56□□□□□ -0.24
Herc4-208ENSMUST00000219577 Tada3Q8R0L9 432 aa13.56□□□□□ -0.24
Herc4-208ENSMUST00000219577 Cabp7Q91ZM8 215 aa13.56□□□□□ -0.24
Herc4-208ENSMUST00000219577 Smc1bQ920F6 1248 aa13.56□□□□□ -0.24
Herc4-208ENSMUST00000219577 Gdf11Q9Z1W4 405 aa13.56□□□□□ -0.24
Herc4-208ENSMUST00000219577 Zfand4D3Z3C6 739 aa13.56□□□□□ -0.24
Herc4-208ENSMUST00000219577 Snap25P60879 206 aa13.56□□□□□ -0.24
Herc4-208ENSMUST00000219577 Map9Q3TRR0 646 aa13.56□□□□□ -0.24
Herc4-208ENSMUST00000219577 Myo19Q5SV80 963 aa13.56□□□□□ -0.24
Herc4-208ENSMUST00000219577 Map3k12Q60700 888 aa13.56□□□□□ -0.24
Herc4-208ENSMUST00000219577 Prc1Q99K43 603 aaKnown RBP13.56□□□□□ -0.24
Herc4-208ENSMUST00000219577 Mfap3lQ9D3X9 409 aa13.56□□□□□ -0.24
Herc4-208ENSMUST00000219577 4932429P05RikA2ADI4 785 aa13.55□□□□□ -0.24
Herc4-208ENSMUST00000219577 Odf2A3KGV1 830 aaKnown RBP13.55□□□□□ -0.24
Herc4-208ENSMUST00000219577 Ppfibp2O35711 882 aa13.55□□□□□ -0.24
Herc4-208ENSMUST00000219577 LbrQ3U9G9 626 aaKnown RBP13.55□□□□□ -0.24
Herc4-208ENSMUST00000219577 Eif3j1Q3UGC7 261 aaKnown RBP13.55□□□□□ -0.24
Herc4-208ENSMUST00000219577 Eif3j2Q66JS6 263 aa13.55□□□□□ -0.24
Herc4-208ENSMUST00000219577 Rnf187Q8BFX1 236 aa13.55□□□□□ -0.24
Herc4-208ENSMUST00000219577 HdlbpQ8VDJ3 1268 aaKnown RBP13.55□□□□□ -0.24
Herc4-208ENSMUST00000219577 Bap1Q99PU7 728 aa13.55□□□□□ -0.24
Herc4-208ENSMUST00000219577 DonsonQ9QXP4 560 aa13.55□□□□□ -0.24
Herc4-208ENSMUST00000219577 BcorQ8CGN4 1759 aa13.55□□□□□ -0.24
Herc4-208ENSMUST00000219577 Zfpm1O35615 995 aa13.55□□□□□ -0.24
Herc4-208ENSMUST00000219577 Gja3Q64448 417 aa13.55□□□□□ -0.24
Herc4-208ENSMUST00000219577 GypcQ78HU7 95 aa13.55□□□□□ -0.24
Herc4-208ENSMUST00000219577 Epn1Q80VP1 575 aa13.55□□□□□ -0.24
Herc4-208ENSMUST00000219577 Prpf40bQ80W14 870 aa13.55□□□□□ -0.24
Herc4-208ENSMUST00000219577 Grin3bQ91ZU9 1003 aa13.55□□□□□ -0.24
Herc4-208ENSMUST00000219577 Tmem47Q9JJG6 181 aa13.55□□□□□ -0.24
Herc4-208ENSMUST00000219577 Plcb1Q9Z1B3 1216 aa13.55□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 30.1 ms