RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Ccdc122Q8BVN0 290 aa10.81□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Tango6Q8C3S2 1079 aa10.81□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 TbcbQ9D1E6 244 aa10.81□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Eddm13E9Q7F5 164 aa10.81□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Lmnb1P14733 588 aaKnown RBP10.81□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Fam196bQ6GQV1 535 aa10.81□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 RadxQ8C779 850 aa10.81□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Plekhg6Q8R0J1 787 aa10.81□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 MbipQ99LQ1 341 aa10.81□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 SelenooQ9DBC0 667 aa10.81□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Cd274Q9EP73 290 aa10.81□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Oxr1Q4KMM3 866 aa10.8□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Abcf1Q6P542 837 aaKnown RBP10.8□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Lca5Q80ST9 704 aa10.8□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Tsen34Q8BMZ5 316 aa10.8□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Nlrp5Q9R1M5 1163 aa10.8□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 1700003F12RikA2AKE5 210 aa10.8□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Stim1P70302 685 aa10.8□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 ArsiQ32KI9 573 aa10.8□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Lrrfip1Q3UZ39 729 aaKnown RBP10.8□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Arhgef2Q60875 985 aa10.8□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Hdac4Q6NZM9 1076 aa10.8□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Usp49Q6P9L4 685 aa10.8□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Klhl30Q8C3F7 581 aa10.8□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Cfap70D3YVL2 1141 aa10.8□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 UncxO08934 530 aa10.8□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Gpbp1Q6NXH3 473 aaKnown RBP10.8□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Riox2Q8CD15 465 aa10.8□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Glrx3Q9CQM9 337 aa10.8□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Cnga2Q62398 664 aa10.79□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Akr1c19G3X9Y6 323 aa10.79□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Ppef2O35385 757 aa10.79□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Tpm1P58771 284 aa10.79□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Cyp2c67Q569X9 491 aa10.79□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Ift88Q61371 824 aa10.79□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Mboat7Q8CHK3 473 aa10.79□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Ccdc94Q9D6J3 314 aa10.79□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Jag1Q9QXX0 1218 aa10.79□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Copb2O55029 905 aa10.79□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Cdh15P33146 784 aa10.79□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Kctd1Q5M956 257 aa10.79□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Madcam1Q61826 405 aa10.79□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 SpidrQ8BGX7 933 aa10.79□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Gpcpd1Q8C0L9 675 aa10.79□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Tbc1d31Q6NXY1 996 aa10.78□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Epha10Q8BYG9 1007 aa10.78□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Fermt2Q8CIB5 680 aa10.78□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Psmd10Q9Z2X2 231 aa10.78□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Slc7a1Q09143 622 aa10.78□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Kiaa1024Q8K3V7 917 aa10.78□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Slc51aQ8R000 340 aa10.78□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 OscarQ8VBT3 265 aa10.78□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Gnl2Q99LH1 728 aaKnown RBP10.78□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Uchl5Q9WUP7 329 aa10.78□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Grm4Q68EF4 912 aa10.78□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Exoc8Q6PGF7 716 aa10.78□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Tmc4Q7TQ65 694 aa10.78□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Tmem60Q8K174 133 aa10.78□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Tab2Q99K90 693 aa10.78□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Wdr64Q9D565 1086 aa10.78□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Pkd2l2Q9JLG4 621 aa10.78□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Zbtb12Q9Z150 459 aa10.78□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Col11a2Q64739 1736 aa10.78□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Hdgfl1Q2VPR5 283 aa10.78□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Plekha7Q3UIL6 1118 aaKnown RBP10.78□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Igf2bp2Q5SF07 592 aaKnown RBP10.78□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Ints4Q8CIM8 964 aa10.78□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Txnrd3Q99MD6 652 aa10.78□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Styxl1Q9DAR2 321 aa10.78□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Tmem191cQ9JJB1 302 aa10.78□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Grin2dQ03391 1323 aa10.77□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Ubr3Q5U430 1889 aa10.77□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Cyp2j7A0A140T8U1 504 aa10.77□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Pabpc1lA2A5N3 607 aaKnown RBP10.77□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Gm10134F6ZQC6 126 aa10.77□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Pcsk7Q61139 770 aa10.77□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Mtss1lQ6P9S0 715 aa10.77□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Rasgrp4Q8BTM9 673 aa10.77□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Tut1Q8R3F9 869 aa10.77□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Ppp2r5dQ91V89 594 aa10.77□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Cul5Q9D5V5 780 aa10.77□□□□□ -0.68
Sh3rf1-202ENSMUST00000209611 Gm43738A0A0G2JEA5 862 aa10.77□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Tigd5Q499M4 642 aa10.77□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Skor1Q8BX46 964 aa10.77□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Kctd10Q922M3 315 aa10.77□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 AfdnQ9QZQ1 1820 aaKnown RBP10.77□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Ltn1Q6A009 1767 aa10.77□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Nr5a1P33242 462 aa10.77□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Nbr1P97432 988 aa10.77□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Kctd3Q8BFX3 815 aa10.77□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Caps2Q8BUG5 550 aa10.77□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Znf428Q8C1M2 176 aa10.77□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Apobec3Q99J72 440 aaKnown RBP10.77□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Vnn1Q9Z0K8 512 aa10.77□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 AdnpQ9Z103 1108 aaKnown RBP10.77□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Slc39a2G3X943 309 aa10.76□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Nr1i2O54915 431 aa10.76□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Ezh2Q61188 746 aaKnown RBP10.76□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Tm4sf1Q64302 202 aa10.76□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Lrrc8aQ80WG5 810 aa10.76□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 20.4 ms