RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Dynll2Q9D0M5 89 aa10.9□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Mfap3lQ9D3X9 409 aa10.9□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Calml3Q9D6P8 149 aa10.9□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Trim55G3X8Y1 545 aa10.9□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 MybP06876 636 aa10.9□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Slc7a1Q09143 622 aa10.9□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Lrrfip1Q3UZ39 729 aaKnown RBP10.9□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Lrrc43Q3V0L5 667 aa10.9□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Oxr1Q4KMM3 866 aa10.9□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Mtss1lQ6P9S0 715 aa10.9□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Epn1Q80VP1 575 aa10.9□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 VmacQ8BP01 174 aa10.9□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Atp1a1Q8VDN2 1023 aaKnown RBP10.9□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Stx17Q9D0I4 301 aa10.9□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Tulp1Q9Z273 543 aa10.9□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Kifc2O08672 792 aa10.89□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Kif3cO35066 796 aa10.89□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Myo1aO88329 1043 aa10.89□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Chp1P61022 195 aa10.89□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Kiaa1468Q148V7 1216 aa10.89□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Carmil2Q3V3V9 1296 aa10.89□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Shisa4Q8CA71 197 aa10.89□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Vps37cQ8R105 352 aa10.89□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Uba5Q8VE47 403 aa10.89□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Filip1Q9CS72 1211 aa10.89□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 AW822073A0A0N4SUK1 652 aa10.89□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Dnajc21E9Q8D0 531 aa10.89□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Mdh1P14152 334 aa10.89□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Zfp781Q0P5U5 243 aa10.89□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Skap2Q3UND0 358 aa10.89□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Mrps31Q61733 384 aaKnown RBP10.89□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Fermt2Q8CIB5 680 aa10.89□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Ulbp1Q8HWA3 334 aa10.89□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 RtcbQ99LF4 505 aaKnown RBP10.89□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Sar1bQ9CQC9 198 aa10.89□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Ssr1Q9CY50 286 aaKnown RBP10.89□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Cbx8Q9QXV1 362 aa10.89□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Tspyl3Q3UYP3 334 aa10.89□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Fxr1Q61584 677 aaKnown RBP10.89□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Hpcal4Q8BGZ1 191 aa10.89□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Efcab8Q8C9R9 203 aa10.89□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Gpr108Q91WD0 569 aa10.89□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Stag1Q9D3E6 1258 aa10.89□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Tpcn1Q9EQJ0 817 aa10.89□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Ess2O70279 479 aa10.88□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 4932429P05RikA2ADI4 785 aa10.88□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Slc39a2G3X943 309 aa10.88□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 H2afxP27661 143 aaKnown RBP10.88□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Krt86P97861 486 aa10.88□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Spata5Q3UMC0 893 aaKnown RBP10.88□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Olfr119Q7TRJ5 321 aa10.88□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 AtrnQ9WU60 1428 aa10.88□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Naaladl2A0A0N4SUJ3 795 aa10.88□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Samd15F6XZJ7 620 aa10.88□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Spg7Q3ULF4 781 aa10.88□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Armc2Q3URY6 854 aa10.88□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Bbs9Q811G0 885 aa10.88□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 HmcesQ8R1M0 353 aaKnown RBP10.88□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Adcy3Q8VHH7 1145 aa10.88□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Erlin1Q91X78 346 aa10.88□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Cabp7Q91ZM8 215 aa10.88□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 MetP16056 1379 aa10.87□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Traf1P39428 409 aa10.87□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Pth1rP41593 591 aa10.87□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Terf1P70371 421 aa10.87□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Tcp11Q01755 566 aa10.87□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Nme8Q715T0 586 aa10.87□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Dph6Q9CQ28 267 aa10.87□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Sgpp1Q9JI99 430 aa10.87□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Cdh15P33146 784 aa10.87□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Gngt1Q61012 74 aa10.87□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Tsg101Q61187 391 aa10.87□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Lrrcc1Q69ZB0 1026 aa10.87□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 RragaQ80X95 313 aa10.87□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Slitrk3Q810B9 980 aa10.87□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Taf6lQ8R2K4 616 aa10.87□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Hs2st1Q8R3H7 356 aa10.87□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Myo3bQ1EG27 1305 aa10.87□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Abcb4P21440 1276 aa10.87□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Gfpt1P47856 697 aa10.87□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Spag7Q7TNE3 227 aaKnown RBP10.87□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Dnph1Q80VJ3 173 aa10.87□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Asnsd1Q8BFS9 627 aa10.87□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Rassf4Q8CB96 322 aa10.87□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Krt222Q8CCX5 294 aa10.87□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Ubxn1Q922Y1 297 aa10.87□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Cxcl11Q9JHH5 100 aa10.87□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 EcsitQ9QZH6 435 aa10.87□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Gli3Q61602 1583 aa10.87□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Wdr19Q3UGF1 1341 aa10.87□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Nr5a1P33242 462 aa10.86□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Vsnl1P62761 191 aa10.86□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Spata32Q8C5V0 334 aa10.86□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Tut1Q8R3F9 869 aa10.86□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Apobec3Q99J72 440 aaKnown RBP10.86□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Dydc2Q9D3X8 139 aa10.86□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Sf3a3Q9D554 501 aaKnown RBP10.86□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Ddx23D3Z0M9 819 aaKnown RBP10.86□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Krt78E9Q0F0 1068 aa10.86□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Nlrp2Q4PLS0 1046 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 44.9 ms