RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Sirt2Q8VDQ8 389 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Setdb1O88974 1307 aa9.24□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Zscan20B2KFW1 1030 aa9.24□□□□□ -0.93
Cdc40-201ENSMUST00000044166 NapbP28663 298 aa9.24□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Abcd1P48410 736 aa9.24□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Fam107bQ3TGF2 131 aa9.24□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Cnnm2Q3TWN3 875 aa9.24□□□□□ -0.93
Cdc40-201ENSMUST00000044166 BcanQ61361 883 aa9.24□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Agtpbp1Q641K1 1218 aa9.24□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Tacc1Q6Y685 774 aa9.24□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Eaf2Q91ZD6 262 aa9.24□□□□□ -0.93
Cdc40-201ENSMUST00000044166 SyncQ9EPM5 470 aa9.24□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Adamtsl3G3UXC7 1706 aa9.24□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Zfand4D3Z3C6 739 aa9.24□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Scgb2b19J3QM75 112 aa9.24□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Nkx2-5P42582 318 aa9.24□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Cct5P80316 541 aaKnown RBP9.24□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Atp11aP98197 1187 aa9.24□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Ppp1r7Q3UM45 361 aa9.24□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Islr2Q5RKR3 745 aa9.24□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Sun3Q5SS91 320 aa9.24□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Gbp4Q61107 620 aa9.24□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Znf24Q91VN1 368 aa9.24□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Chchd3Q9CRB9 227 aaKnown RBP9.24□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Kcnq5Q9JK45 933 aa9.24□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Stk39Q9Z1W9 556 aa9.24□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Suclg2Q9Z2I8 433 aa9.24□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Ubr2Q6WKZ8 1755 aa9.24□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Mrc1Q61830 1456 aa9.24□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Cyp2j7A0A140T8U1 504 aa9.23□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Prl3d1P18121 224 aa9.23□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Hps6Q8BLY7 805 aa9.23□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Rasal3Q8C2K5 1041 aa9.23□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Mta1Q8K4B0 715 aaKnown RBP9.23□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Irak4Q8R4K2 459 aa9.23□□□□□ -0.93
Cdc40-201ENSMUST00000044166 RarsQ9D0I9 660 aaKnown RBP9.23□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Cnpy3Q9DAU1 276 aa9.23□□□□□ -0.93
Cdc40-201ENSMUST00000044166 WtapQ9ER69 396 aa9.23□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Ces1hD3Z298 562 aa9.23□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Kif23E9Q5G3 953 aa9.23□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Pde6bP23440 856 aa9.23□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Tcp11Q01755 566 aa9.23□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Igflr1Q3U4N7 345 aa9.23□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Slc27a1Q60714 646 aa9.23□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Lrsam1Q80ZI6 727 aa9.23□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Trim6Q8BGE7 488 aa9.23□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Adcy3Q8VHH7 1145 aa9.23□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Myh1Q5SX40 1942 aa9.23□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Rimbp3Q3V0F0 1606 aa9.23□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Scgb2b18A0A087WPA9 112 aa9.23□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Gm5580A0A0N4SVP8 411 aa9.23□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Trim30cD3YVI9 513 aa9.23□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Gpr182P43142 395 aa9.23□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Rhbdl3P58873 404 aa9.23□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Stim1P70302 685 aa9.23□□□□□ -0.93
Cdc40-201ENSMUST00000044166 RragbQ6NTA4 374 aa9.23□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Caps2Q8BUG5 550 aa9.23□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Ano2Q8CFW1 1002 aa9.23□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Calcoco1Q8CGU1 691 aa9.23□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Vmn1r218Q8R261 298 aa9.23□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Pcdha12Q91Y18 950 aa9.23□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Sar1bQ9CQC9 198 aa9.23□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Etnk1Q9D4V0 363 aa9.23□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Speer4bQ9D9F7 267 aa9.23□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Copb1Q9JIF7 953 aa9.23□□□□□ -0.93
Cdc40-201ENSMUST00000044166 CluhQ5SW19 1315 aa9.23□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Mfsd4b4J3QNS5 503 aa9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 CrcpO35427 148 aa9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Tpp1O89023 562 aa9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Anxa1P10107 346 aaKnown RBP9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Tns3Q5SSZ5 1440 aa9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Fam170aQ66LM6 333 aa9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Lrrn2Q6PHP6 730 aa9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Prpf40bQ80W14 870 aa9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Tbc1d5Q80XQ2 815 aa9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Sash3Q8K352 380 aa9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Znf445Q8R2V3 986 aa9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Ranbp17Q99NF8 1088 aa9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Klf15Q9EPW2 415 aa9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Tfcp2Q9ERA0 502 aa9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 AmfrQ9R049 643 aa9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Myh2G3UW82 1942 aa9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 C2cd2E9Q3C1 696 aa9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Gm21969J3QJZ1 289 aa9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 LtbrP50284 415 aa9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Card10P58660 1021 aa9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Nlrp4cQ3TKR3 982 aa9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Lrrfip1Q3UZ39 729 aaKnown RBP9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Lmod1Q8BVA4 595 aa9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Kif2bQ8C0N1 668 aa9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 GdaQ9R111 454 aa9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Myh6Q02566 1938 aaKnown RBP9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Col20a1Q923P0 1320 aa9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Foxn2E9Q7L6 429 aa9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Phldb3E9QAF4 648 aa9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Cacna2d1O08532 1103 aa9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Psmd14O35593 310 aa9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Chp1P61022 195 aa9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Spout1Q3UHX9 385 aaKnown RBP9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 C87499Q3UX49 493 aa9.22□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms