RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 ThemisQ8BGW0 636 aa18.16■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Rcn2Q8BP92 320 aa18.16■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Ift81O35594 676 aa18.16■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Efcab14Q8BGQ6 484 aa18.16■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Rab3gap1Q80UJ7 981 aa18.15■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 VmacQ8BP01 174 aa18.15■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 4931423N10RikQ9D4J9 382 aa18.15■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Efcab6Q6P1E8 1516 aa18.15■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Bach2P97303 839 aa18.15■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Pls1Q3V0K9 630 aa18.15■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Gja8P28236 440 aa18.15■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Acot10Q32MW3 439 aa18.15■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Ccdc40Q8BI79 1192 aa18.15■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Med23Q80YQ2 1367 aa18.15■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 AW822073A0A0N4SUK1 652 aa18.15■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Casp8O89110 480 aa18.15■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Dab2P98078 766 aa18.15■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Iqcb1Q8BP00 598 aa18.15■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Calr3Q9D9Q6 380 aa18.15■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Pram1Q6BCL1 675 aa18.15■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Cep104Q80V31 926 aa18.15■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Parp2O88554 559 aa18.15■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Fbxo41Q6NS60 873 aa18.15■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Lrrc8aQ80WG5 810 aa18.15■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Snx14Q8BHY8 964 aa18.15■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Pa2g4P50580 394 aaKnown RBP18.15■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 PhexP70669 749 aa18.15■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Golga4Q91VW5 2238 aa18.15■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Casp1P29452 402 aa18.14■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Fen1P39749 378 aa18.14■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Atp8b1Q148W0 1251 aa18.14■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Vps54Q5SPW0 977 aa18.14■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Ppp2r2cQ8BG02 447 aa18.14■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Serpinb13Q8CDC0 389 aa18.14■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Zmat2Q9CPW7 199 aa18.14■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Sh3bp1P55194 680 aa18.14■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Lrp2bpQ9D4C6 346 aa18.14■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Mroh9G5E8L9 891 aa18.14■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Klhl14Q69ZK5 630 aa18.14■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Ncoa7Q6DFV7 943 aa18.14■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Apol10aQ8CCA5 318 aa18.14■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Pard3Q99NH2 1333 aa18.14■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 BicraF8VPZ9 1578 aa18.14■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Proca1B0QZF7 307 aa18.14■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Nom1Q3UFM5 854 aaKnown RBP18.14■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Lrrc36Q3V0M2 755 aa18.14■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Gys2Q8VCB3 704 aa18.14■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Ccdc87Q8CDL9 855 aa18.13■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Rad51bO35719 350 aa18.13■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Atp8a2P98200 1148 aa18.13■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Nsun2Q1HFZ0 757 aaKnown RBP18.13■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Ccdc15Q8C9M2 810 aa18.13■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 1700013H16RikQ9DAC5 291 aa18.13■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 ChmQ9QXG2 665 aa18.13■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Tnni3P48787 211 aa18.13■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Foxp1P58462 705 aa18.13■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 NeblQ0II04 452 aa18.13■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Gas7Q60780 421 aa18.13■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Q80Y73 168 aa18.13■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Plekha5E9Q6H8 1269 aa18.13■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Ddb1Q3U1J4 1140 aaKnown RBP18.13■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Col17a1Q07563 1470 aa18.13■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 NppbP40753 121 aa18.13■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Tbx22Q8K402 517 aa18.13■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Npc1l1Q6T3U4 1333 aa18.13■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Ccdc33Q3ULW6 985 aa18.12■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Arhgap30Q640N3 1101 aa18.12■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Etf1Q8BWY3 437 aaKnown RBP18.12■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Dnajc25A2ALW5 357 aa18.12■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Il4rP16382 810 aa18.12■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Trim5E9PV98 497 aa18.12■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 NxnP97346 435 aa18.12■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Bcap29Q61334 240 aa18.12■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Krt9Q6RHW0 743 aa18.12■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 PaoxQ8C0L6 504 aa18.12■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Mettl5Q8K1A0 209 aa18.12■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Cops6O88545 324 aa18.12■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Prl3d1P18121 224 aa18.12■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Spats2lQ91WJ7 558 aaKnown RBP18.12■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 MefvQ9JJ26 767 aa18.12■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Cdk13Q69ZA1 1511 aaKnown RBP18.12■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Samd9lQ69Z37 1561 aa18.12■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Zmynd8A2A484 1235 aaKnown RBP18.12■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Znf76Q8BMU0 568 aa18.12■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Dtnbp1Q91WZ8 352 aa18.12■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Kcnb2A6H8H5 907 aa18.12■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Nlrp5Q9R1M5 1163 aa18.12■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 AU019823E9PUQ3 292 aa18.12■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 OtulinQ3UCV8 352 aa18.12■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 D130040H23RikQ8BII3 405 aa18.12■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Znf697Q569E7 569 aa18.11■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Catsper1Q91ZR5 686 aa18.11■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Xrcc5P27641 732 aa18.11■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Xbp1O35426 267 aa18.11■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Tubgcp3P58854 905 aa18.11■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Saal1Q9D2C2 474 aa18.11■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Kif22Q3V300 660 aa18.11■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Sorbs1Q62417 1290 aa18.11■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Ivns1abpQ920Q8 642 aa18.11■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Rint1Q8BZ36 792 aa18.11■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 54.4 ms