RNA–Protein interactions for RNA: ENSMUST00000032962.10

Cln3-201, Transcript of Battenin, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Cln3, Length 2,386 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3-201ENSMUST00000032962 Pcdhb22Q91XZ8 794 aa13.42□□□□□ -0.26
Cln3-201ENSMUST00000032962 Trim59Q922Y2 403 aa13.42□□□□□ -0.26
Cln3-201ENSMUST00000032962 Col4a3bpQ9EQG9 624 aa13.42□□□□□ -0.26
Cln3-201ENSMUST00000032962 Cbx2P30658 519 aa13.42□□□□□ -0.26
Cln3-201ENSMUST00000032962 Gtpbp6Q3U6U5 514 aa13.42□□□□□ -0.26
Cln3-201ENSMUST00000032962 Glra4Q61603 456 aa13.42□□□□□ -0.26
Cln3-201ENSMUST00000032962 Rasgrp4Q8BTM9 673 aa13.42□□□□□ -0.26
Cln3-201ENSMUST00000032962 Hnrnpul1Q8VDM6 859 aaKnown RBP13.42□□□□□ -0.26
Cln3-201ENSMUST00000032962 FAM186AQ9D9R9 1790 aa13.42□□□□□ -0.26
Cln3-201ENSMUST00000032962 Prkab1Q9R078 270 aa13.42□□□□□ -0.26
Cln3-201ENSMUST00000032962 Rgs9O54828 675 aa13.41□□□□□ -0.26
Cln3-201ENSMUST00000032962 Usp5P56399 858 aaKnown RBP13.41□□□□□ -0.26
Cln3-201ENSMUST00000032962 Kcnd1Q03719 651 aa13.41□□□□□ -0.26
Cln3-201ENSMUST00000032962 Rnf41Q8BH75 317 aa13.41□□□□□ -0.26
Cln3-201ENSMUST00000032962 Sirt2Q8VDQ8 389 aa13.41□□□□□ -0.26
Cln3-201ENSMUST00000032962 Stag2O35638 1231 aa13.4□□□□□ -0.26
Cln3-201ENSMUST00000032962 ThbdP15306 577 aa13.4□□□□□ -0.26
Cln3-201ENSMUST00000032962 Mmp20P57748 482 aa13.4□□□□□ -0.26
Cln3-201ENSMUST00000032962 Tpm1P58771 284 aa13.4□□□□□ -0.26
Cln3-201ENSMUST00000032962 Snap25P60879 206 aa13.4□□□□□ -0.26
Cln3-201ENSMUST00000032962 Sap30bpQ02614 308 aa13.4□□□□□ -0.26
Cln3-201ENSMUST00000032962 D630036H23RikQ3UQD6 204 aa13.4□□□□□ -0.26
Cln3-201ENSMUST00000032962 WtapQ9ER69 396 aa13.4□□□□□ -0.26
Cln3-201ENSMUST00000032962 Atrnl1Q6A051 1378 aa13.4□□□□□ -0.26
Cln3-201ENSMUST00000032962 NrapQ80XB4 1728 aa13.4□□□□□ -0.26
Cln3-201ENSMUST00000032962 NpcdF8VQB8 469 aa13.4□□□□□ -0.26
Cln3-201ENSMUST00000032962 Bace1P56818 501 aa13.4□□□□□ -0.26
Cln3-201ENSMUST00000032962 Sec23aQ01405 765 aa13.4□□□□□ -0.26
Cln3-201ENSMUST00000032962 Slc10a4Q3UEZ8 437 aa13.4□□□□□ -0.26
Cln3-201ENSMUST00000032962 RubcnQ80U62 956 aa13.4□□□□□ -0.26
Cln3-201ENSMUST00000032962 DlatQ8BMF4 642 aa13.4□□□□□ -0.26
Cln3-201ENSMUST00000032962 Apbb1ipQ8R5A3 670 aa13.4□□□□□ -0.26
Cln3-201ENSMUST00000032962 BrapQ99MP8 591 aa13.4□□□□□ -0.26
Cln3-201ENSMUST00000032962 Akap8Q9DBR0 687 aaKnown RBP13.4□□□□□ -0.26
Cln3-201ENSMUST00000032962 Trmt112Q9DCG9 125 aa13.4□□□□□ -0.26
Cln3-201ENSMUST00000032962 Tmem47Q9JJG6 181 aa13.4□□□□□ -0.26
Cln3-201ENSMUST00000032962 Slc4a9E9PUP3 929 aa13.39□□□□□ -0.27
Cln3-201ENSMUST00000032962 Znf568E9PYI1 671 aa13.39□□□□□ -0.27
Cln3-201ENSMUST00000032962 Znf326O88291 580 aa13.39□□□□□ -0.27
Cln3-201ENSMUST00000032962 MyrflQ3UN70 904 aa13.39□□□□□ -0.27
Cln3-201ENSMUST00000032962 Slc44a1Q6X893 653 aa13.39□□□□□ -0.27
Cln3-201ENSMUST00000032962 Phf20l1Q8CCJ9 1013 aa13.39□□□□□ -0.27
Cln3-201ENSMUST00000032962 GrapQ9CX99 217 aa13.39□□□□□ -0.27
Cln3-201ENSMUST00000032962 Me1P06801 572 aa13.39□□□□□ -0.27
Cln3-201ENSMUST00000032962 Cnnm2Q3TWN3 875 aa13.39□□□□□ -0.27
Cln3-201ENSMUST00000032962 Kctd1Q5M956 257 aa13.39□□□□□ -0.27
Cln3-201ENSMUST00000032962 Ccdc82Q6PG04 518 aa13.39□□□□□ -0.27
Cln3-201ENSMUST00000032962 Hps6Q8BLY7 805 aa13.39□□□□□ -0.27
Cln3-201ENSMUST00000032962 Tmem87aQ8BXN9 555 aa13.39□□□□□ -0.27
Cln3-201ENSMUST00000032962 Rufy2Q8R4C2 606 aa13.39□□□□□ -0.27
Cln3-201ENSMUST00000032962 Ccer1Q9CQL2 403 aa13.39□□□□□ -0.27
Cln3-201ENSMUST00000032962 Eid1Q9DCR4 169 aa13.39□□□□□ -0.27
Cln3-201ENSMUST00000032962 Acot3Q9QYR7 432 aa13.39□□□□□ -0.27
Cln3-201ENSMUST00000032962 A0A1Y7VML8 143 aa13.38□□□□□ -0.27
Cln3-201ENSMUST00000032962 L1camP11627 1260 aa13.38□□□□□ -0.27
Cln3-201ENSMUST00000032962 Fdx1P46656 188 aa13.38□□□□□ -0.27
Cln3-201ENSMUST00000032962 Sh3bp1P55194 680 aa13.38□□□□□ -0.27
Cln3-201ENSMUST00000032962 Zfp953Q3UPV7 304 aa13.38□□□□□ -0.27
Cln3-201ENSMUST00000032962 Panx2Q6IMP4 677 aa13.38□□□□□ -0.27
Cln3-201ENSMUST00000032962 BC048507Q80ZS7 89 aa13.38□□□□□ -0.27
Cln3-201ENSMUST00000032962 Ncaph2Q8BSP2 607 aa13.38□□□□□ -0.27
Cln3-201ENSMUST00000032962 Stac3Q8BZ71 360 aa13.38□□□□□ -0.27
Cln3-201ENSMUST00000032962 Ulbp1Q8HWA3 334 aa13.38□□□□□ -0.27
Cln3-201ENSMUST00000032962 Traf5P70191 558 aa13.38□□□□□ -0.27
Cln3-201ENSMUST00000032962 Sp4Q62445 782 aa13.38□□□□□ -0.27
Cln3-201ENSMUST00000032962 Ccp110Q7TSH4 1004 aa13.38□□□□□ -0.27
Cln3-201ENSMUST00000032962 Ift74Q8BKE9 600 aa13.38□□□□□ -0.27
Cln3-201ENSMUST00000032962 Kiaa1524Q8BWY9 907 aa13.38□□□□□ -0.27
Cln3-201ENSMUST00000032962 Mtmr4Q91XS1 1190 aa13.38□□□□□ -0.27
Cln3-201ENSMUST00000032962 Fam114a1Q9D281 569 aa13.38□□□□□ -0.27
Cln3-201ENSMUST00000032962 Mad2l2Q9D752 211 aa13.38□□□□□ -0.27
Cln3-201ENSMUST00000032962 Elf2Q9JHC9 593 aa13.38□□□□□ -0.27
Cln3-201ENSMUST00000032962 Prg3Q9JL95 222 aa13.38□□□□□ -0.27
Cln3-201ENSMUST00000032962 Bcorl1A2AQH4 1781 aa13.38□□□□□ -0.27
Cln3-201ENSMUST00000032962 Fam205a1D3YZF6 1314 aa13.37□□□□□ -0.27
Cln3-201ENSMUST00000032962 Gm30191A0A0U1RNT7 187 aa13.37□□□□□ -0.27
Cln3-201ENSMUST00000032962 Paxbp1P58501 919 aa13.37□□□□□ -0.27
Cln3-201ENSMUST00000032962 Ttbk2Q3UVR3 1243 aa13.37□□□□□ -0.27
Cln3-201ENSMUST00000032962 Ubac1Q8VDI7 409 aa13.37□□□□□ -0.27
Cln3-201ENSMUST00000032962 Xpo4Q9ESJ0 1151 aa13.37□□□□□ -0.27
Cln3-201ENSMUST00000032962 Pcdh15Q99PJ1 1943 aa13.37□□□□□ -0.27
Cln3-201ENSMUST00000032962 Mmp10O55123 476 aa13.37□□□□□ -0.27
Cln3-201ENSMUST00000032962 Ddx49Q4FZF3 480 aaKnown RBP13.37□□□□□ -0.27
Cln3-201ENSMUST00000032962 Abhd15Q5F2F2 459 aa13.37□□□□□ -0.27
Cln3-201ENSMUST00000032962 Dync1li2Q6PDL0 492 aaKnown RBP13.37□□□□□ -0.27
Cln3-201ENSMUST00000032962 Ercc6lQ8BHK9 1240 aa13.37□□□□□ -0.27
Cln3-201ENSMUST00000032962 Cnpy3Q9DAU1 276 aa13.37□□□□□ -0.27
Cln3-201ENSMUST00000032962 Naaladl2A0A0N4SUJ3 795 aa13.36□□□□□ -0.27
Cln3-201ENSMUST00000032962 Samd1D3YXK1 519 aa13.36□□□□□ -0.27
Cln3-201ENSMUST00000032962 Zscan18E9PUD6 809 aa13.36□□□□□ -0.27
Cln3-201ENSMUST00000032962 Ppef2O35385 757 aa13.36□□□□□ -0.27
Cln3-201ENSMUST00000032962 L1td1Q587J6 782 aaKnown RBP13.36□□□□□ -0.27
Cln3-201ENSMUST00000032962 Telo2Q9DC40 840 aaKnown RBP13.36□□□□□ -0.27
Cln3-201ENSMUST00000032962 Rgs12Q8CGE9 1381 aa13.36□□□□□ -0.27
Cln3-201ENSMUST00000032962 Zdbf2Q5SS00 2493 aaKnown RBP13.36□□□□□ -0.27
Cln3-201ENSMUST00000032962 Usp17ldG5E8G2 545 aa13.36□□□□□ -0.27
Cln3-201ENSMUST00000032962 Usp17lcG5E8I7 545 aa13.36□□□□□ -0.27
Cln3-201ENSMUST00000032962 Metap2O08663 478 aaKnown RBP13.36□□□□□ -0.27
Cln3-201ENSMUST00000032962 LyarQ08288 388 aaKnown RBP13.36□□□□□ -0.27
Cln3-201ENSMUST00000032962 Luzp1Q8R4U7 1068 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 31 ms