RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Gucy1a2F8VQK3 730 aa10.57□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Lrrc6O88978 473 aa10.57□□□□□ -0.72
Col6a1-201ENSMUST00000001147 LtbrP50284 415 aa10.57□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Cdr2P97817 455 aa10.57□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Tcerg1lQ3B807 590 aa10.57□□□□□ -0.72
Col6a1-201ENSMUST00000001147 LbrQ3U9G9 626 aaKnown RBP10.57□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Znf18Q810A1 556 aa10.57□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Slc4a8Q8JZR6 1089 aa10.57□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Tut1Q8R3F9 869 aa10.57□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Prpf3Q922U1 683 aaKnown RBP10.57□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Fbf1A2A870 1173 aa10.57□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Ces1aE9PYP1 563 aa10.57□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Slc39a2G3X943 309 aa10.57□□□□□ -0.72
Col6a1-201ENSMUST00000001147 PcQ05920 1178 aa10.57□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Znf667Q2TL60 609 aa10.57□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Nme8Q715T0 586 aa10.57□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Ttll4Q80UG8 1193 aa10.57□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Krt222Q8CCX5 294 aa10.57□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Hps4Q99KG7 671 aa10.57□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Mrpl12Q9DB15 201 aaKnown RBP10.57□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Foxo4Q9WVH3 505 aa10.57□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Krt78E9Q0F0 1068 aa10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Fxr1Q61584 677 aaKnown RBP10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Ift74Q8BKE9 600 aa10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 RalylQ8BTF8 293 aa10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Washc1Q8VDD8 475 aa10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Syce1Q9D495 329 aa10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 AatfQ9JKX4 526 aaKnown RBP10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Myo3bQ1EG27 1305 aa10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Wdr19Q3UGF1 1341 aa10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Prss40A6H6T1 365 aa10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 MybP06876 636 aa10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Dnm2P39054 870 aaKnown RBP10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Atp1b3P97370 278 aa10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Nlrp2Q4PLS0 1046 aaKnown RBP10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Ppm1eQ80TL0 749 aa10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Filip1Q9CS72 1211 aa10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Efhd1Q9D4J1 240 aa10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Znf287Q9EQB9 759 aa10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Nap1l5Q9JJF0 156 aa10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Nr2e3Q9QXZ7 395 aa10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Slit2Q9R1B9 1521 aa10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Ugt1a8D3Z748 530 aa10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Ugt1a10E9PXN7 530 aa10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Ess2O70279 479 aa10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Tcp11Q01755 566 aa10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 DSCC1Q14AI0 399 aa10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Pls1Q3V0K9 630 aa10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Gngt1Q61012 74 aa10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 ZyxQ62523 564 aa10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Olfr119Q7TRJ5 321 aa10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 RbsnQ80Y56 783 aa10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 ParnQ8VDG3 624 aa10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Card14Q99KF0 999 aa10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Ccnt1Q9QWV9 724 aaKnown RBP10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Gja10Q9WUS4 505 aa10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Chp1P61022 195 aa10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Carmil2Q3V3V9 1296 aa10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Tshz1Q5DTH5 1084 aa10.56□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Cdh15P33146 784 aa10.55□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Tubb4bP68372 445 aaKnown RBP10.55□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Lrrc43Q3V0L5 667 aa10.55□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Gas8Q60779 478 aa10.55□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Tubb2aQ7TMM9 445 aa10.55□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Hpcal4Q8BGZ1 191 aa10.55□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Fam161bQ8CB59 589 aa10.55□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Tubb2bQ9CWF2 445 aa10.55□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Ddx23D3Z0M9 819 aaKnown RBP10.55□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Nr5a1P33242 462 aa10.55□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Prpf38aQ4FK66 312 aaKnown RBP10.55□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Ube3cQ80U95 1083 aa10.55□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Naa15Q80UM3 865 aaKnown RBP10.55□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Lrrc41Q8K1C9 807 aa10.55□□□□□ -0.72
Col6a1-201ENSMUST00000001147 NapaQ9DB05 295 aa10.55□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Tpcn1Q9EQJ0 817 aa10.55□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Cbx8Q9QXV1 362 aa10.55□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Cacna2d4Q5RJF7 1116 aa10.55□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Spag7Q7TNE3 227 aaKnown RBP10.55□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Slitrk3Q810B9 980 aa10.55□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Prkag3Q8BGM7 489 aa10.55□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Spata4Q8K3V1 295 aa10.55□□□□□ -0.72
Col6a1-201ENSMUST00000001147 PpanQ91YU8 470 aaKnown RBP10.55□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Sgpp1Q9JI99 430 aa10.55□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Plcb1Q9Z1B3 1216 aa10.55□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Bpifb4A2BGH0 617 aa10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 DgkiD3YWQ0 1071 aa10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Traf1P39428 409 aa10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Ighmbp2P40694 993 aa10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Eya3P97480 510 aa10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Tubb5P99024 444 aaKnown RBP10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Q3TYL0 343 aa10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Spata5Q3UMC0 893 aaKnown RBP10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Lrrc36Q3V0M2 755 aa10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Slc9a1Q61165 820 aa10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Pramel6Q810Y9 485 aa10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Dclk3Q8BWQ5 790 aa10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 RtcbQ99LF4 505 aaKnown RBP10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Tsnaxip1Q99P25 704 aa10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Tfap4Q9JIZ5 338 aa10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Trip6Q9Z1Y4 480 aa10.54□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 107.3 ms